prot_H-paniculata_contig173.4064.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig173.4064.1
Unique Nameprot_H-paniculata_contig173.4064.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length106
Homology
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Match: A0A6H5KRX4_9PHAE (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRX4_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 2.950e-57
Identity = 85/94 (90.43%), Postives = 92/94 (97.87%), Query Frame = 0
Query:    5 AVVAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSPVTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSG 98
            +++A+CANDNRLQIYEGCNSP+FASWRLAHVLEEHDL+ISGISWSPVTNKIVTCSHDRNAFVWSYDAAQ KW+PILCALML RAALDVHWSPSG
Sbjct:   25 SMLALCANDNRLQIYEGCNSPSFASWRLAHVLEEHDLVISGISWSPVTNKIVTCSHDRNAFVWSYDAAQAKWNPILCALMLTRAALDVHWSPSG 118          
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Match: A0A836CE76_9STRA (Actin-related protein 2/3 complex subunit ARPC1B or p41-Arc n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE76_9STRA)

HSP 1 Score: 147 bits (372), Expect = 7.920e-41
Identity = 68/101 (67.33%), Postives = 77/101 (76.24%), Query Frame = 0
Query:    4 GAVVAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSPVTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSGNHAFAV 104
            G ++A+C N+N L IYEGCNS   ASWR AHVL EHD+IISGISWS   NKIVTCSHDRNAFVW +DAA N+W P LC L ++RAAL V WSP G   FAV
Sbjct:   23 GDMLALCPNNNELHIYEGCNSADMASWRRAHVLAEHDMIISGISWSHANNKIVTCSHDRNAFVWKFDAAANRWVPTLCVLRIDRAALSVEWSPDGTK-FAV 122          
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Match: A0A067BR35_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BR35_SAPPC)

HSP 1 Score: 119 bits (299), Expect = 8.950e-33
Identity = 51/100 (51.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    7 VAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSPVTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSGNHAFAVMR 106
            VA+C N N + IY  C++P  A WR   +L EHD+++SG+ WSPV + IV+CSHDR+AFVW+Y+ ++ KW P L  L + RAA++V WSP G   FAV R
Sbjct:   22 VAICPNTNEIWIYSNCHAPDVAQWRKEAILTEHDMVVSGLDWSPVHDMIVSCSHDRSAFVWNYNPSERKWKPSLVVLRITRAAINVKWSPDGKK-FAVGR 120          
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Match: K3W7Z4_GLOUD (Actin-related protein 2/3 complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7Z4_GLOUD)

HSP 1 Score: 122 bits (307), Expect = 2.600e-31
Identity = 53/98 (54.08%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    7 VAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSPVTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSGNHAFAV 104
            VAVC N N + IY GC  P    WR   VL EHD+++ G+ WSPVT+ +V+CSHDR AFVW Y+AA  +W P L  L + RAA++V WSP+G H FAV
Sbjct:   25 VAVCPNSNEIWIYSGCQQPDVTKWRKEAVLTEHDMLVCGLDWSPVTDLLVSCSHDRGAFVWKYEAAYRQWKPSLVVLRITRAAINVKWSPNG-HKFAV 121          
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Match: A0A3M6V8F1_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8F1_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.270e-30
Identity = 49/98 (50.00%), Postives = 71/98 (72.45%), Query Frame = 0
Query:    7 VAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSPVTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSGNHAFAV 104
            +A+C N N + IY GC++P  + WR   VL EHD+++SG+ WSPV +++V+CSHDR+AFVW Y+A+  +W P+L  L + RAA++V WSP G   FAV
Sbjct:   29 LAICPNSNEIWIYSGCHAPDPSQWRKEAVLTEHDMLVSGLDWSPVHDQLVSCSHDRSAFVWKYEASYRQWKPLLVVLRVTRAAINVKWSPDGKK-FAV 125          
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Match: A0A8K1FHC8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHC8_PYTOL)

HSP 1 Score: 120 bits (302), Expect = 1.460e-30
Identity = 54/98 (55.10%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    7 VAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSPVTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSGNHAFAV 104
            VA+C N N + IY GC +P    WR   VL EHD+I+SG+ WSPV + IV+CSHDR AFVW YD A  +W P L  L ++RAA++V WSPSG   FAV
Sbjct:   28 VALCPNSNEIWIYSGCQNPDATKWRKEAVLTEHDMIVSGLDWSPVNDMIVSCSHDRGAFVWKYDPAFRQWKPSLVVLRISRAAINVKWSPSGTK-FAV 124          
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Match: A0A397EZI9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EZI9_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.750e-30
Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = 0
Query:    7 VAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSPVTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSG 98
            VA+C N N + IY  C +   A WR   VL EHD+++SG+ WSPV + +V+CSHDR+AFVW Y+ ++ KW P L  L + RAA+ V WSP+G
Sbjct:   22 VAICPNTNEIWIYSNCQAVDVAQWRKEAVLTEHDMVVSGLDWSPVHDMLVSCSHDRSAFVWKYEPSERKWKPSLVVLRITRAAMTVKWSPNG 113          
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Match: A0A7S3PJY8_9STRA (Actin-related protein 2/3 complex subunit n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJY8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.780e-30
Identity = 52/98 (53.06%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    7 VAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSPVTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSGNHAFAV 104
            VAVC ND  + IY G ++P  + W+  H+L+ H +++ GI WSP+TNKIVTCSHD NAFVW++D  + KW P L  L +NRAAL   WSP G   FAV
Sbjct:   22 VAVCKNDENVVIYSGADNPDASQWKAEHILKGHTMVVCGIDWSPLTNKIVTCSHDVNAFVWTFDGRKQKWKPSLSILRINRAALSCRWSPDGTK-FAV 118          
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Match: A0A662WKQ5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKQ5_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.200e-30
Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = 0
Query:    7 VAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSPVTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSGNHAFAVM 105
            +A+C N N + IY GC+ P    WR   VL EHD+++ G+ WSPV +++V+CSHDR+AFVW Y+AA  +W P+L  L + RAA++V WSP G +  A +
Sbjct:   28 LAICPNSNEIWIYSGCHQPDATQWRKEAVLTEHDMLVCGLDWSPVHDQLVSCSHDRSAFVWKYEAAFRQWKPLLVVLRITRAAINVKWSPDGAYLMATI 126          
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Match: A0A0W8CZ58_PHYNI (Fatty acid synthase subunit beta n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CZ58_PHYNI)

HSP 1 Score: 117 bits (292), Expect = 3.280e-30
Identity = 49/98 (50.00%), Postives = 69/98 (70.41%), Query Frame = 0
Query:    7 VAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSPVTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSGNHAFAV 104
            +A+C N N + IY GC++P  + WR   VL EHD+++ G+ WSPV +++V+CSHDR+AFVW Y+AA  +W P+L  L + RAA +V WSP G   FAV
Sbjct:   28 LAICPNSNEIWIYSGCHAPDPSQWRKEAVLTEHDMLVCGLDWSPVHDQLVSCSHDRSAFVWKYEAAYRQWKPLLVVLRITRAATNVKWSPDGKK-FAV 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig173.4064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRX4_9PHAE2.950e-5790.43ANAPC4_WD40 domain-containing protein n=2 Tax=Ecto... [more]
A0A836CE76_9STRA7.920e-4167.33Actin-related protein 2/3 complex subunit ARPC1B o... [more]
A0A067BR35_SAPPC8.950e-3351.00Uncharacterized protein (Fragment) n=1 Tax=Saprole... [more]
K3W7Z4_GLOUD2.600e-3154.08Actin-related protein 2/3 complex subunit n=1 Tax=... [more]
A0A3M6V8F1_9STRA1.270e-3050.00Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A8K1FHC8_PYTOL1.460e-3055.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A397EZI9_9STRA1.750e-3050.00Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A7S3PJY8_9STRA1.780e-3053.06Actin-related protein 2/3 complex subunit n=1 Tax=... [more]
A0A662WKQ5_9STRA2.200e-3047.47Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A0W8CZ58_PHYNI3.280e-3050.00Fatty acid synthase subunit beta n=1 Tax=Phytophth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 29..68
e-value: 3.1E-5
score: 33.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 36..68
score: 9.94
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..105
e-value: 5.2E-30
score: 106.5
IPR017383Actin-related protein 2/3 complex subunit 1PANTHERPTHR10709ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1coord: 6..104
NoneNo IPR availablePANTHERPTHR10709:SF2ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNITcoord: 6..104
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 36..77
score: 9.573
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig173contigH-paniculata_contig173:42174..42794 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig173.4064.1mRNA_H-paniculata_contig173.4064.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig173 42174..42794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig173.4064.1 ID=prot_H-paniculata_contig173.4064.1|Name=mRNA_H-paniculata_contig173.4064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
MFGGAVVAVCANDNRLQIYEGCNSPTFASWRLAHVLEEHDLIISGISWSP
VTNKIVTCSHDRNAFVWSYDAAQNKWHPILCALMLNRAALDVHWSPSGNH
AFAVMR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017383ARPC1
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf