mRNA_H-paniculata_contig173.4062.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Match: D8LGC8_ECTSI (Thiamine diphosphokinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGC8_ECTSI) HSP 1 Score: 312 bits (799), Expect = 6.260e-96 Identity = 168/322 (52.17%), Postives = 192/322 (59.63%), Query Frame = 1
Query: 547 PLVLVVLNTKGDDGSKALFRHLWTRAVLCVCADGGANRLHDSFE--------DDEHGTAEQQRAHFIPDVIVGDLDSLRPEVAAYYRDRGTEVKIHEDQDHNDFEKCLLEIERRLGGECAKGIARSHMSKVGEELEASGAKGNGNVKQEVEGGREVRQQPGTEEATMSVSFGDLKPTAGVAEHAQQGFRVSSETTTATVVGLGAFGGRFDHEMAAISILHTYTSRFSRLVLMGGGNVAFLLAPGVKHVVEPDVRFEGPTVGLIPVGGPCRSVTTDGLKWNLQAGWLEFGVLVSSSNSIIGKEVAVSTDAPLVWTAEFKANEW 1488
PL LV+LNT+G+ S+ L RHLW RA L VCADGGANRLHDSF +D H Q RA F+PD+IVGDLDSLRPEVA +Y G+E+K+ +DQDH DFEKCL+E+E RL S ATVVGLGAFGGRFDHEM A+S+LH YTSRF RLVLMG GNVAFLL PG+ H V+PD RFEGPTVGL+PVGGPCR+VTT+GL+WNL G LEFGV VSSSN ++G V V TDAPLVWTAEFKA W
Sbjct: 92 PLALVILNTQGEGESEGLLRHLWGRADLRVCADGGANRLHDSFGGXXXXGDVEDRH----QDRARFVPDIIVGDLDSLRPEVARFYEGLGSEIKLRDDQDHCDFEKCLVEVESRLSSPXXXXXXXXXXX-------------------------------------------------------------XSAPCGATVVGLGAFGGRFDHEMQAVSLLHAYTSRFHRLVLMGAGNVAFLLQPGLSHAVQPDSRFEGPTVGLLPVGGPCRAVTTEGLRWNLDGGGLEFGVCVSSSNRVVGDVVRVVTDAPLVWTAEFKAAAW 348
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Match: A0A836CNJ4_9STRA (Thiamine diphosphokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ4_9STRA) HSP 1 Score: 223 bits (568), Expect = 3.130e-63 Identity = 134/316 (42.41%), Postives = 162/316 (51.27%), Query Frame = 1
Query: 535 HVDEPLVLVVLNTKGDDGSKALF-RHLWTRAVLCVCADGGANRLHDSFEDDEHGTAEQQRAHFIPDVIVGDLDSLRPEVAAYYRDRGTEVKIHEDQDHNDFEKCLLEIERRLGGECAKGIARSHMSKVGEELEASGAKGNGNVKQEVEGGREVRQQPGTEEATMSVSFGDLKPTAGVAEHAQQGFRVSSETTTATVVGLGAFGGRFDHEMAAISILHTYTSRFSRLVLMGGGNVAFLLAPGVKHVVEPDVRFEGPTVGLIPVGGPCRSVTTDGLKWNLQAGWLEFGVLVSSSNSIIGKEVAVSTDAPLVWTAEFKA 1479
H +P ++VLN G+D +LF R W A L +CADGGAN L+DS EQ R+ F+PD++VGDLDSLRPEVA YYRD G + DQD NDFEKCL ++ L ++GA + +TT VV LGAFGGRFD EMAA +L+ YT F R VL+GGGNV+FLL P +H + PD R EGP GL+P+G PC SVTT GL W+L L FG VSSSN I EV V TDAP+VWT F A
Sbjct: 36 HPGQPTAIIVLNNVGEDSGSSLFLRSAWHSASLRLCADGGANSLYDSL-------GEQNRSLFLPDMVVGDLDSLRPEVADYYRDSGAAIVKVSDQDRNDFEKCLQQV-----------------------LASAGA-------------------------------------------------AARDTT---VVALGAFGGRFDQEMAAFHLLYQYTHAFRRFVLLGGGNVSFLLLPDRRHRIVPDPRMEGPFCGLLPIGNPCGSVTTSGLMWDLHQQPLAFGGRVSSSNRIAAAEVEVVTDAPVVWTMSFGA 269
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Match: A0A835ZF58_9STRA (Thiamine pyrophosphokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF58_9STRA) HSP 1 Score: 214 bits (544), Expect = 2.760e-60 Identity = 125/309 (40.45%), Postives = 156/309 (50.49%), Query Frame = 1
Query: 550 LVLVVLNTKGDDG--SKALFRHLWTRAVLCVCADGGANRLHDSFEDDEHGTAEQQRAHFIPDVIVGDLDSLRPEVAAYYRDRGTEVKIHEDQDHNDFEKCLLEIERRLGGECAKGIARSHMSKVGEELEASGAKGNGNVKQEVEGGREVRQQPGTEEATMSVSFGDLKPTAGVAEHAQQGFRVSSETTTATVVGLGAFGGRFDHEMAAISILHTYTSRFSRLVLMGGGNVAFLLAPGVKHVVEPDVRFEGPTVGLIPVGGPCRSVTTDGLKWNLQAGWLEFGVLVSSSNSIIGKEVAVSTDAPLVWTAE 1470
L ++VLN G DG SK +H W+ A L VCADGGAN L+D E ++ R ++PDVI GDLDSLRP+VA YY DRG + DQDHNDFEKC+ EI R G S T+V +GA GGRFD EMAA +LH YT+ F VL+G GN++FLL PG H + P EGPT GL+P+G P VT+ GL+W+L+A L FG VSSSN++ +EV+V+TDAPLVWT E
Sbjct: 18 LAVIVLNNLGSDGNGSKHFIKHAWSTASLRVCADGGANGLYDILEGED-------RDAYLPDVIKGDLDSLRPDVARYYEDRGVNIIQAADQDHNDFEKCVREILHRAG---------------------------------------------------------------------------STAAATTLVAVGAHGGRFDQEMAAFHLLHKYTAHFEHFVLLGNGNLSFLLLPGRTHRICPHPPREGPTCGLLPLGQPAARVTSRGLRWDLRAQPLAFGAFVSSSNALEAREVSVTTDAPLVWTIE 244
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Match: A0A6G0XFX2_9STRA (Thiamine pyrophosphokinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFX2_9STRA) HSP 1 Score: 187 bits (475), Expect = 2.450e-50 Identity = 122/347 (35.16%), Postives = 161/347 (46.40%), Query Frame = 1
Query: 445 PAGPPPTKWHRNGFLVSRVESGANANDGYDHVDEPLVLVVLNTKGDDGSKALFRHLWTRAVLCVCADGGANRLHDSFEDDEHGTAEQQRAHFIPDVIVGDLDSLRPEVAAYYRDRGTEVKIHEDQDHNDFEKCLLEIERRLGGECAKGIARSHMSKVGEELEASGAKGNGNVKQEVEGGREVRQQPGTEEATMSVSFGDLKPTAGVAEHAQQGFRVSSETTTATVVGLGAFGGRFDHEMAAISILHTYTSRFSRLVLMGGGNVAFLLAPGVKHVVEPDVRFEGPTVGLIPVGGPCRSVTTDGLKWNLQAGWLEFGVLVSSSNSIIGKEVAVSTDAPLVWTAEFKANE 1485
P P K H N F+ S D+PL L+V+N G S F HLW +A + VCADGGAN+L+D + D ++P I GDLDS+RP+VA+Y+ GT+V DQD ND +KCL S + + EE +A+ A S+ V+ +GA GGRFD EM ++ L ++S F R+ L+ A LL PG KH + P+ EG T GL+P+GGPC+S+TT GLKWNL FG LVS+SN ++G EV V T PLVWT E K E
Sbjct: 10 PVSPGRLKIHDNTFMTSSSSLA----------DDPLALIVINGIGLVSS---FDHLWKKAKITVCADGGANKLYDHIQKDS------MTRTYVPQYIKGDLDSIRPDVASYFETLGTQVIKDPDQDSNDLDKCL-----------------SLLQNLQEEFKATEA--------------------------------------------------SNTPAKLNVLVIGAMGGRFDQEMQNVNALFQWSSIFDRMTLVSDSTSATLLVPG-KHSIRPNFTVEGRTCGLVPIGGPCKSLTTSGLKWNLTNHETFFGGLVSTSNHVLGDEVLVETSDPLVWTTELKTEE 269
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Match: A0A7S2V3Z0_9STRA (Thiamine diphosphokinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z0_9STRA) HSP 1 Score: 188 bits (477), Expect = 5.970e-50 Identity = 131/362 (36.19%), Postives = 168/362 (46.41%), Query Frame = 1
Query: 457 PPTKWHRNGFLVSRV-ESGANA----NDGYDHVDEPLVLVVLNTK--GDDGSKALFRHLWTRAVLCVCADGGANRLHDSFEDDEHGTAEQQRA---HFIPDVIVGDLDSLRPEVAAYYRDRGTEVKIHEDQDHNDFEKCLLEIERRLGGECAKGIARSHMSKVGEELEASGAKGNGNVKQEVEGGREVRQQPGTEEATMSVSFGDLKPTAGVAEHAQQGFRVSSETTTATVVGLGAFGGRFDHEMAAISILHTYTSRFSRLVLMGGGNVAFLLAPGVKHVVEPDVRFEGPTVGLIPVGGPCRSVTTDGLKWNLQAGWLEFGVLVSSSNSIIGKEVAVSTDAPLVWTAEFKANEWAKVAATLS 1512
P + H GFL +R ES N D + LV+LNT GD F LW+ + +CADGGANRL+D E + ++PDVI GDLDSLRP+V ++Y+ GT + DQ NDF K L E+ ++ Q P + TV+ LGAFGGRFD EMAAI+ L+ + F RL+L+ N+ FLL+PG +H V P+ EGPT GL+PVGG CR VTT GLKW+L+ L FG LVSSSN + K V V T PL+W +E K WAK+AA S
Sbjct: 36 PAVQEHCQGFLTARWGESVVNQPTLNGDNQSAGKDIYALVILNTNCCGDS-----FERLWSLSTFRICADGGANRLYDMVVKLARKRGENPKELVRKYVPDVIKGDLDSLRPDVGSFYQSLGTRIIRDRDQSCNDFYKALSELRSM----------------------------------------QLEQYP---------------------------------LSRMTVMALGAFGGRFDQEMAAINALYEWDQVFERLLLLSEQNLGFLLSPG-RHRVVPNTLVEGPTCGLLPVGGACRGVTTRGLKWDLKDQVLRFGGLVSSSNRLAAKVVEVQTRDPLLWMSEIKPESWAKLAAAYS 318
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Match: A0A485LA89_9STRA (Thiamine pyrophosphokinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LA89_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.560e-48 Identity = 121/342 (35.38%), Postives = 159/342 (46.49%), Query Frame = 1
Query: 445 PAGPPPTKWHRNGFLVSRVESGANANDGYDHVDEPLVLVVLNTKGDDGSKALFRHLWTRAVLCVCADGGANRLHDSFEDDEHGTAEQQRAHFIPDVIVGDLDSLRPEVAAYYRDRGTEVKIHEDQDHNDFEKCLLEIERRLGGECAKGIARSHMSKVGEELEASGAKGNGNVKQEVEGGREVRQQPGTEEATMSVSFGDLKPTAGVAEHAQQGFRVSSETTTATVVGLGAFGGRFDHEMAAISILHTYTSRFSRLVLMGGGNVAFLLAPGVKHVVEPDVRFEGPTVGLIPVGGPCRSVTTDGLKWNLQAGWLEFGVLVSSSNSIIGKEVAVSTDAPLVWTAE 1470
P P K H N F+ + S + PL L+V+N G S F LW +A + VCADGGAN+L D E+ +F+P I GDLDS+RP+VAAY++ G +V DQD ND +KCL + R+ S + +++ASGA V+ +GA GGRFD EM I+ L ++S F R+ L+ A LL PG KH + P+ EG T GLIP+GGPC S+TTDGLKWNL FG LVS+SN ++G E+ V T PLVWT E
Sbjct: 10 PLSPGRLKLHDNAFMTNSSTSVT---------ENPLALIVINGIGLVSS---FDTLWNKAKITVCADGGANKLFDYIHK------EKVPKNFVPQYIKGDLDSIRPDVAAYFQQHGAQVIKDPDQDSNDLDKCLS-------------LLRNLQSDL--DVDASGA-----------------------------------------------------PVKLNVLVVGAMGGRFDQEMQNINALFQWSSIFERMTLVSDSTSATLLVPG-KHTIRPNFSIEGRTCGLIPIGGPCESLTTDGLKWNLSNDSTSFGGLVSTSNHVLGSEIQVETSDPLVWTTE 264
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Match: A0A8J5XDA2_DIALT (Thiamine pyrophosphokinase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDA2_DIALT) HSP 1 Score: 181 bits (459), Expect = 4.190e-48 Identity = 115/335 (34.33%), Postives = 157/335 (46.87%), Query Frame = 1
Query: 472 HRNGFLVSRVESGANANDGYDHVDEPLVLVVLNTKGDDGSKA----LFRHLWTRAVLCVCADGGANRLHDSFEDDEHGTAEQQRAHFIPDVIVGDLDSLRPEVAAYYRDRGTEVKIHEDQDHNDFEKCLLEIERRLGGECAKGIARSHMSKVGEELEASGAKGNGNVKQEVEGGREVRQQPGTEEATMSVSFGDLKPTAGVAEHAQQGFRVSSETTTATVVGLGAFGGRFDHEMAAISILHTYTSRFSRLVLMGGGNVAFLLAPGVKHVVEPDVRFEGPTVGLIPVGGPCRSVTTDGLKWNLQAGWLEFGVLVSSSNSIIGKEVAVSTDAPLVWT 1464
H FL SR HV LV LN++G A +F W A + VCADG ANRLHD +E +RA F+PD+I GDLDSLR +V A+Y +RG ++ D+DH+D +KCL+ + E + R PG E T+ V LGAFGGR D +MA +++L + F++L+L+ + AFLLAPG +H +EP+ E GL+P+G PC SV T GL+WNL L FG +VS+SN ++G+EV V TD L+WT
Sbjct: 14 HSTAFLSSRTS--------LPHV----ALVFLNSEGAQAGSAAPDSIFERAWRCARVRVCADGAANRLHDGLRTNE------RRAAFVPDLIKGDLDSLRTDVRAFYAERGVRIEQDTDEDHHDLDKCLMALRD-------------------------------------EQAEQARALPGAERMTVVV--------------------------------LGAFGGRLDQQMANLNMLFRWQGAFAQLLLLSEHSAAFLLAPG-EHTIEPNAEVESAVCGLVPLGAPCASVRTSGLRWNLCDQPLAFGGMVSTSNEVVGREVHVQTDGALLWT 260
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Match: A0A7S4B1H2_CHRCT (Thiamine diphosphokinase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B1H2_CHRCT) HSP 1 Score: 177 bits (448), Expect = 2.420e-46 Identity = 115/310 (37.10%), Postives = 153/310 (49.35%), Query Frame = 1
Query: 550 LVLVVLNTKGD-DGSKALFRHLWTRAVLCVCADGGANRLHDSFEDDEHGTAEQQRAHFIPDVIVGDLDSLRPEVAAYYRDRGTEVKIHEDQDHNDFEKCLLEIERRLGGECAKGIARSHMSKVGEELEASGAKGNGNVKQEVEGGREVRQQPGTEEATMSVSFGDLKPTAGVAEHAQQGFRVSSETTTATVVGLGAFGGRFDHEMAAISILHTYTSRFSRLVLMGGGNVAFLLAPGVKHVVEPDVRFEGPTVGLIPVGGPCRSVTTDGLKWNLQAGW-LEFGVLVSSSNSIIGKEVAVSTDAPLVWTAEF 1473
L LV+LN G D + LW+ A L +CADG ANRLHDS +E R+ +PDVI GDLDSLR +VA YYR+ G ++ DQD +DFEKCL+ + +R A+ G R S VV GAFGGR DH MA +++++ Y S F R +L+ ++AF L PG+ +++EP++ E + GLIP+GG C V T GL+WNL LEFG LVSSSN I+G +V V TD PL+WT+ F
Sbjct: 55 LALVLLNIDGGVDTDRLSLGGLWSMANLRICADGAANRLHDSLGHNE-------RSQMLPDVISGDLDSLRGDVADYYREHGVSIEHQADQDSHDFEKCLMWLRQR--------------------------------------------------------------------QAEDGIRFS-------VVAYGAFGGRLDHMMANMNMVYKY-SCFERFILLTRHSLAFQLKPGM-NIIEPNLDVENGSCGLIPLGGRCEGVITTGLRWNLDGTVPLEFGSLVSSSNRIVGDQVTVQTDTPLLWTSNF 280
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Match: A0A0M0JVD9_9EUKA (Thiamine diphosphokinase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVD9_9EUKA) HSP 1 Score: 186 bits (471), Expect = 6.360e-46 Identity = 114/303 (37.62%), Postives = 156/303 (51.49%), Query Frame = 1
Query: 550 LVLVVLNTKGDDGSKALFRHLWTRAVLCVCADGGANRLHDSFEDDEHGTAEQQRAHFIPDVIVGDLDSLRPEVAAYYRDRGTEVKIHEDQDHNDFEKCLLEIERRLGGECAKGIARSHMSKVGEELEASGAKGNGNVKQEVEGGREVRQQPGTEEATMSVSFGDLKPTAGVAEHAQQGFRVSSETTTATVVGLGAFGGRFDHEMAAISILHTYTSRFSRLVLMGGGNVAFLLAPGVKHVVEPDVRFEGPTVGLIPVGGPCRSVTTDGLKWNLQAGW-LEFGVLVSSSNSIIGKEVAVSTDAPL 1455
+ LV+LN + D F HLW ++ + +CADG ANRLHD E E QR+ +PD+I GDLDSLR +V+++Y RG + +Q+ NDFEKCL ++R E A + + P + EA+ + + D+ G G + S VV GAFGGR D +MA +++ +T+ F L L+ +V FLL PG HV+EPD+ E + GLIP+GG C V T GL+WNL LEFG LVSSSN I+G+ V V T APL
Sbjct: 29 IALVILNVECGDSKGTRFEHLWQQSSVKLCADGAANRLHDRLE-------EPQRSSMLPDIITGDLDSLRGDVSSFYAARGVVITGVSEQESNDFEKCLRWLQREQDSEVAAAAEQERGAPY----------------------------PVSAEASATTPYRDVGSRGGGVAERAAGLPLYS------VVAYGAFGGRLDQQMANLNMAYTFDC-FRHLFLLSDHSVVFLLRPGA-HVIEPDLDAEDGSCGLIPLGGRCEGVVTTGLRWNLDGDRALEFGDLVSSSNEIVGERVTVRTTAPL 288
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Match: A0A7S3YA89_HETAK (Thiamine diphosphokinase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA89_HETAK) HSP 1 Score: 173 bits (439), Expect = 2.130e-44 Identity = 116/318 (36.48%), Postives = 145/318 (45.60%), Query Frame = 1
Query: 541 DEPLVLVVLNTKGDDGSKALFRHLWTRAVLCVCADGGANRLHDSFEDDEHGTAEQQRAHFIPDVIVGDLDSLRPEVAAYYRDRGTEVKIHEDQDHNDFEKCLLEIERRLGGECAKGIARSHMSKVGEELEASGAKGNGNVKQEVEGGREVRQQPGTEEATMSVSFGDLKPTAGVAEHAQQGFRVSSETTTATVVGLGAFGGRFDHEMAAISILHTYTSRFSR--LVLMGGGNVAFLLAPGVKHVVEPDVRFEGPTVGLIPVGGPCRSVTTDGLKWNLQAGWLEFGVLVSSSNSIIGKEVAVSTDAPLVWTAEFKANEW 1488
DE L+VLNT D FR LW + +CADGGANRLHDS A +RA +P I GDLDSLRPEV +YR G E+ DQD NDF+KCL E R +H GR + T + LGAFGGRFD EMAA+ + SR +VL+ N+ LL PG +H + P+ EGPT GL+P+GGP S+TT GLKWNL + FG L+S+SN I+G V V+T PL+W + W
Sbjct: 98 DEIFALIVLNT---DCCTQSFRRLWGLSTFRLCADGGANRLHDSLR-----AAGGERARHVPHAIKGDLDSLRPEVGEFYRSLGAEIIHDGDQDCNDFQKCLREARARRD---------AHFP-----------------------GRRL-----------------------------------------TALALGAFGGRFDQEMAAVHACFEFQRGGSRDRVVLLSDENLGLLLGPG-RHRLAPNPALEGPTCGLLPIGGPVSSLTTTGLKWNLSNEPVRFGGLISTSNKILGPVVEVTTSDPLLWMTQLHPAGW 333 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig173.4062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig173.4062.1 >prot_H-paniculata_contig173.4062.1 ID=prot_H-paniculata_contig173.4062.1|Name=mRNA_H-paniculata_contig173.4062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=507bp MGRRASDSPVVAINVALFCALISVRGARAFAFLRSNHYHQHHKAAAASAAback to top mRNA from alignment at H-paniculata_contig173:18929..21296+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig173.4062.1 ID=mRNA_H-paniculata_contig173.4062.1|Name=mRNA_H-paniculata_contig173.4062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2368bp|location=Sequence derived from alignment at H-paniculata_contig173:18929..21296+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig173:18929..21296+ >mRNA_H-paniculata_contig173.4062.1 ID=mRNA_H-paniculata_contig173.4062.1|Name=mRNA_H-paniculata_contig173.4062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3042bp|location=Sequence derived from alignment at H-paniculata_contig173:18929..21296+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |