mRNA_H-paniculata_contig173.4061.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig173.4061.1
Unique NamemRNA_H-paniculata_contig173.4061.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig173.4061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig173contigH-paniculata_contig173:4193..18751 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size437
Cds size243
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig173.4061.1prot_H-paniculata_contig173.4061.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig173 4283..18647 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929363.377284-UTR-H-paniculata_contig173:4192..42821622929363.377284-UTR-H-paniculata_contig173:4192..4282Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig173 4193..4282 -
1691480831.090033-UTR-H-paniculata_contig173:4192..42821691480831.090033-UTR-H-paniculata_contig173:4192..4282Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig173 4193..4282 -
1622929363.4528744-UTR-H-paniculata_contig173:18647..187511622929363.4528744-UTR-H-paniculata_contig173:18647..18751Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig173 18648..18751 -
1691480831.1288855-UTR-H-paniculata_contig173:18647..187511691480831.1288855-UTR-H-paniculata_contig173:18647..18751Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig173 18648..18751 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929363.4250233-CDS-H-paniculata_contig173:4282..44261622929363.4250233-CDS-H-paniculata_contig173:4282..4426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig173 4283..4426 -
1691480831.1064727-CDS-H-paniculata_contig173:4282..44261691480831.1064727-CDS-H-paniculata_contig173:4282..4426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig173 4283..4426 -
1622929363.4362142-CDS-H-paniculata_contig173:18548..186471622929363.4362142-CDS-H-paniculata_contig173:18548..18647Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig173 18549..18647 -
1691480831.120398-CDS-H-paniculata_contig173:18548..186471691480831.120398-CDS-H-paniculata_contig173:18548..18647Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig173 18549..18647 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig173.4061.1

>prot_H-paniculata_contig173.4061.1 ID=prot_H-paniculata_contig173.4061.1|Name=mRNA_H-paniculata_contig173.4061.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bp
MSSVTSSTHEPPGGGSMTHDFTAVQRIDLIYIAVADPSTRCDRCVGVPLT
RGGNGGGVAVAEVAKWQPATSTARACCAPP*
back to top

mRNA from alignment at H-paniculata_contig173:4193..18751-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig173.4061.1 ID=mRNA_H-paniculata_contig173.4061.1|Name=mRNA_H-paniculata_contig173.4061.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14559bp|location=Sequence derived from alignment at H-paniculata_contig173:4193..18751- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAACGGTGCAGTGCCGCGTGCCTGGATCAAACGGGTTGGTGGCAGCATC CCCCGCCGGTTTCGCTGTGCTGGAGATTGCTTGTCCGGAAGGTGGTGTGC GGCGATGTCTTCGGTCACATCGTCGACCCATGAACCCCCCGGTGGCGGCT CAATGACCCACGACTTCACTGCCGTTCAGCGAATCGACCTGATCTACATT GCGGTGAGTTCCGACCGCGCGTGCTGGGTTGCCCTTTGTATATATCCTTC TCTTTTCCTCCGAGGTAGTGTGCTTGCCGTGGTCTATCTTTGTCAAGAGT TCTCAACTACCCTATCCTGAGCTATCATTACGTTTGGTCTGCTCCTCGCA CAGCGATCTGTGTGTCAATCGAGCAAACGAACTTTTCGTGGAGAGAAAAG CGTGCACAGACGGCAAGTCGGAAAAGTCGTTTTTTAATCCATGTTGATCT TTTTTACATTCAGGCGAATGGCGTCTATTATATAGACATGATCACGGGAA AGAATATCACCGCCGCTTTTCAGACAAACAGCACAGGACAGGACAGTGCA GATAGTATATACATCCCAGACAGCCACTTACCATGGTTCTATGCATGACG AGCGCAGAGCTCGTCTACTTTTATTGTCAGATTCAGATTTCGTTTCAAGA CAGCCTCAACCACCTGCACAAGACACTTGTGTCACTCGTTTCACCGCCAT TTGCGATAGGCCTTGGAAGACGGTGCGCTTGAAATTAAGTTGTTTTGTAA GACACCTCTTGCTCTCTCCTGTACACTGTTGCACATATCTGGATCCTCTT TGTTGGCTTCACTGCACTGCCCAACAGACTGTCACGCCCTGCAAGAGTTG ATTACAGGACGACATTGTTCTTCCATTATGTAGATATGGATATTAATTGT TTTGCGGAATGATAGGAACATAAACGAATATTAATGAAATACAGGTATAC ACGCGTTTATGGCGCCGGATATGAATGTTTATTCTTTTGCGGAATGATCG GAAAAATGAATAAATAACGATGAAATACTTGTGCAAATAAACACAGTGAT TTGCAAACCAGGATCTTTGGAGGAGTAGCTTATGTCGGAGATTCCATTAC GCACACGCAGCAAGTGAAGATACAAATCCGTCGTCGGTTTCCGGGACTTC TAGCGGAGAGACTCTTAGTCTCAACCACCTAACCCCACGGATCTTCATAT ACAAATACTGAAAGAGACCTAGACGCAGAGTTCTCAAGAGGAACCTGTTC CCTAACTCTTGACTTTAAAGAGCTCTGCCCTAGCCGGTTGATTGGGTTGA TGACTTGACTCTCCTTGCTCACACAACATGAAAGAACTTGAGCGTCACCG GTCGGAGGCTTCGGTGGCGTAAGGGACTTCGATGGACAACGAGAGCTTTC TCAGGAGAGACAATATTGAAGATCACGCAAAAACTTCAGTATCGAAGAAA CAAAAGCCGGTAACGGTGTTCTTCGTTGCTGAGAAAAACCTGAGTAGGCG CAGCTTAAAATCGAAGGAGAATTTCCGCCTTCCATTTGCAAGTATTGGTG TCGCTTGAAAAATTTCAGTAACGAAGGCATCAACTAAACCGACACAACCC CAAACGATAACACAGTACATACAGTAAGTAACAGATGCAATAGGTTACTC AAGGTAAAACCCAACCTGTCGAAAACCCGAAGAGACAAGACTGTCGTTAT ACCGCCGAGGCCGTATGGCGGCGGCGTTGCGTCTTGCTGTCTGTCTGTGC TGTGGCGTGTCAAGTCTCTTGGCTGCTATGGTACTGCCTGTGCCATATGT GTTGTTATACCACTCTGGTCGTAAATGTAAGCCATATCTGTATTTCGTGT TGGCATCAGCTTCTAACGCCCAACTTAAACCAAATTCGCCCTTCGCAAAA GAGAAGGAAGACTAGATTTCTGCGAGATCGTAGCCGGTAACCCGTCTGCC GGTTGTATAGGCTGGGTGTCTGGTACTGGCAATTGTTGCGTAGCTGCTGT CCGTGTTGCGTCAGCTGCTGTTCTGATATGCTGTCAAGGTAGCCACACCC AATTTTTACACATGATGAAACAACAGAACAAACAAACGACACAAATTCAA AAATATATTGGTGATTGGTTGGAGAGTGGAATGGGGTTCTTAATTTTTTT TTTCTTAATATGGGACTAAGGGACGGGAAGGGACAGGACAGAACAAGGGT GACTATATATTTGGACTGGATGCAGGATTGGACTAGTCCCGGTCCCCGTC CCGTCCTCGAAGAAAACGATGGAAAGAGACCGAAGTTGGGGGGGAAGTAA CGGGACGGAACGGAACGGAACGATTTTTTTAATTGATTAATGAATGCATC CCATTTCACCCCCACGACCTCGCAGGACTTAGTGGCAAGATCGACCTGAA TTCTTGTCTCTGCTAGCGTAGTTTTTCCAGCTTTTCGAGGTCGAGAATCT TAACCTCCCCTGAAAAATTGCCAACGCCTGGTCTATTCAAATTGTGGACA CACAATCCAGCAACTTCAAGATACTGAGTATAACTACGTTTTCGATTGGA CCAAGCTTCCACGTTGAACGAAGGAAATTACGTCGTTCTTTTATACCCCA AAAATTGATGTGGATGTACATGATGGGTTGAAACGGAGGTCGAGGTTTGT TTCGATAAAAAATGAAGAAGGAACGGAAACATACGCGCGTGCAAGGTTTG TGTGCACCAAGGACCAAAGACGGCCAAAATGGATGCATTCATGTGAAGTA ATGAGCTCTGTTTCTCGAGATATCATCGTCGACATGAACCACCATGCGAT AGTCCGTACTGACGCTGGGTAGCCTGCGTGTCGGTGCACCCTCTGGACGA CTTCCATACGTCTGCGGCGTACCCTTGTCGTGTTGGAGTGTCTGACACTT GAACGACAGTACAGGGTCAGCAGGGTGTGTGATGTGTGGTTTTTGTCCGC TTACATTGTGGATGAGAAAATCCGACGAAAAAAGGTGAGAATTACGAAGG TGGTGGCTGGTCGTTCTCGTTCATTTTCTTTCACTTGTAAATCGATGTCT ATCCTGGATCCAAAAACACGAAATGAATATTTTTTTCCAAAACCGCGTTC TCATGGTGCAGGCGTCATCCTGCTGAAGCTGTCCTCAGCAATTGGGGCAT ACAGCAATGTGGCTATGTTGTAGTTGGTCGAATACTTGCTCCTGCATTTA GTGCACTAGTGTTCGTCTTGTCACTGCTACATGTTATTGCTATCATGTAT CATGTGTATAGATTTTTATCAGTCTTGAACATCTTATGCACACAAAAGAT TAATCCATATCATCTATTTACCTGGACGTCGTACTTGTATGAGAGCAGCA GTGGGAGAAAGGTGTGAGCGACAGGGGAACAAGCTCTTGTTCGTGTGTAG CACTCTTGGCCAAACAGGCGTCCCTCCCCCCTCCCCGTTCCCTTTATTGG TAGATTTTTTGCTGGTAAGTGTACATGATCAAAGTTTGATATTAGCTGCT GCATGACCTCAACGTGGGCACAATATAATTATTACACGAGCTTTAGATCT TAGCTCTACATACCCCCCCCCCCCCCAAGGTGAATACCCCCATCCTCGTG GGCCTGGTAAATTTCTGTCCCGAAACAGTACCCGGAGCTAAAAAGGTTTA GCTGTTGGTTTTTTAAGTATGGGAAGGATGAAAAATGGGAACTTCTGATG CGTTGATTTTTTTTTTCATCTCATGACCCCCCAACAAACCTAAAAAACTA CCTCACACACAGTTACGAGCTGGCTCACGCGTAAAACTCCCAAAAGCGTA TTATTATGTGTTTTCCACGAATACTTCACCAAGCCTGTTTTTCACACTTT GATCTGCATATTTGGGAATTTCGGGAATATCCCAACTGTGAATTTTTGTT CCCAAACTCGTAAGGACGCCGACTCGAATCCACAACAAAAAGGCATTCAA CCGCGATGGCGAGTCCTTTTGGTTTTTGTGGGCTTTCTCATGCAAAGTTT TCAATTTTTTGGACAAAATTTCACACGTGTTTCCTCACTTCATTCCATGT GTCGATGCCTCGTTGCTGTTTTTTGTAGCACATTCCCTCACCAGTTTTCC GGGGTCTTATGTTCCCATACTGTCTAAAATCGCCTTGAGACCCCCGCAAA ACGGTGAAAAATGTGGGATTAGCCCAGGCGACAAGCCGTCGTCGACTTCG GAATTCGAGCAAGAATTTCGTGTGCAAATTTTCGTTCCCAAAGTCACGAG AAAGCCGCCGCTCTAATCCAGAAACTTTTTTTTTCTGCCTGCGCGGCTAA TACTAAAGACAGTAGAATGACGCAGTTCGTCTCGGTTGCGAGTCACCTTA TTGGTTTAAGATTTTTCACGCACTTTTCGAGTTTCTGAACAAGACTTCAC ATACATGTTCCTAATAACTTGGTGCCCAAGGTCAGCCGTGTTGGGCCTTT TTTATTTCGGTTTTGATCACCGGTTATTTGGGTTCTCACGGGTCCCTTTG TCCGAAGAATACACTGGGACCTCAGAAACCGGCGATCAAAAGCTTGAGAC AAAAAAGGCTCCAGCACGGGTGATCTTGGGCACCAAGCAAGGAACACGTG TGCGAAGTCTCATCCAAAAACTCGAAAAACCGGCGTCAGGCGTCAAAAAT CCCGAAATATACTATTTCGGATTTGTCCCGTCAATCAGCCTGTAGCCATT TTTTGCAGTATCAATCAATGCCGGTAGCACATCCCAGCGCCCGCGTTGAT TTGACCGTTCGAACCCCCCTCAGCCCTCCGGACAGAACACGCCTTCGTTT TTCCACACCCGGAATGTAAACCGAAGCTGACTGTATTCCCGGAAAGGTGG CGACACTATTGATAGCTGTCTATCCCGCACTACTTTTCCGTGCTGCAATC AATTTGACAAATTGATCACGCCGACCAAAAGGTGGGGGTAGCAAGGATAC TGGATAATAGATACCACCGTGTGCACGGCAACAGACCATCAACACAGTAC AGATATTGATTGTTACCGGAGGATGCAAGACCCAACAGACAGTCAACACT AACCAGTTGTTTCTTTCACAAGAAGCGAGACTGGAACCCGCGATTTCCGA AATCTTGTGCACCACAGTACAATGACCCATTTGACTTCAGAGAGCTTGTC TCTTTTCTTTTTTTGATCTTCATATATAGTAATTTTCTGTGTGTTTCTGG CAGTTGCAGCCGTTTCTTTGAAGTGTCTGCAAGTCTCCCAGAGCTTTTGC CCCGATGCTTTGCCGAGCCTCTACGGTGGGGTTGTGTGCTTTTGCTGATT TGAACAATATTGGGAGTGCCGGTATGCGAAAGAAATTACGCAAGGGATGA AACCAGGGACCATCTCGGTAACGTTTCTTTGGAAAACGACAGATGTATAG TTATTTATATTCAATTTTCACCGTGAGGTTGTGTGCTCGTACTGTCAAAA TTGATGTGGTGTTCTCAAATACCGTTGCTAACTTTGACAGTAAATTATAG ATCAGGAATGCAGTATATCAAGCAAGCTGCAGTTGCCAGCAAGAATACGT AGGCTATTGATTCCAGTAGAAATAAGGCATCTTGTCATTTTGCACCATGG CAGGTGTAGTTTGGATGGTATCTTCGGGGTATCGTTTTGGTGACTCTATA GTATGCTGACACAGTGCTGACTACAAATTCGTTACTGTCAAAGTGTACTT CAACGTATGCGTCATGACGTCAGAGCTGGGGTGGTATGTGTGAGTTAACA AGGAACAGATCCTACCCATCTCCGATTGAGAAATAATTATCGTAGGTATC TATCTCAGTGAGGAAGGAGATGGTAAATGTTGATTTTTCCTTTTCTACAA TTAGAGCCGTAGATAATGGTTGAAATCTCCTGATCAAGGAGATCGCATTT GCATTTTATCTCGGTGTCGTAAGTGCTCGTTCTGAACGGGTATTATCACG GTAGTATCTTGTTTTACAAGAAATGTAAAATCAAGATTCGTATCTTGTGG ACTACCCACAGAATCACTTTGCCACGTTTCCCGAATAGCCGGTTTCTCCG GGACATGGAATAATATAAGAACTCAAAATAGACTTGTGAGAAACTTTGTT TTTCATCTGTCTTGGGAGAGCTTGTTCAATCTGCCTTGCTCTACAGATTG AGAAGACACCGGAAGAGCGTGTTCTGATCCGTTGGTAGCTAATAGACGCG ACGAGGTGTTTGATATTTTGATCAACACGGATTAGGAAGATGCGATTTGC TGAGGCTACAGAAAAATGAGCCTAATGGTCATTTCTTCACCTTCGTTGCC ACATCGTCACTGCTGCTCATGTTCAGTGAAATTCGAACGACCTTCTGCCC ATTCGTTACTTTCCCCTCCCCTATACGGTGCAAACGCTTCATTACTTTAT GGAAAAGGTGGAAAAATAGATGAAAACAGACGCACATGACAACCATGGCG TACAACCATTCACAGCGGGAGCTAGAAGGGGGCTGGTGGGGAAACGGTCA CATAACCAATCCTGAGCCTCCCTACGGATGAAGATGTCGAAAACATAATT CTTTCACTCAAGACGACAGTCCAAAGATTAAAATACATTAGAAACTATAT TTTCAGTTCCACAGCTAAATCGAGTATTGCGTAATAGGTGCCCTATAGCG CTTATGCGTCTTATGCCATGGCATGAAATAGCAGTGAGCTACAACCGAAG CAAACTGCAGGCATTAGACACACGCGTAGGATACATAGCTCAATAAGGTC TGCCCGCTCCGGGCTCGCAAACGTACAACAGCAACGCTAACGTCGTTCAA GCTCCCATTACAGTGGACGGCCAGTTTTAAACACAAAACAGCTGCCCTAA ATTTTCTACGGACAGTAAAGACAGCTACACTCTGTAAAAGAGGGCTAAGG CATGACAGCGTTGAACTTCATATAATACAGGGATCAGCACTGAGGCTTTG AACACCTCTGCATTGCATGCGAAGCAGGTGGTTGAATGTAATCTCAGAGC TACGAGCAAAGACCGTTACGCTGAGCGGACCACGCACTGCAATTGTTGTA GTTGAAATTTATACCCATCAGCGCGTAGCCTGGATCTACGAGAGTTGGAG GTCTTTTGATTGAGTGAAATTATTTCGATATTGGGCAAGCAACAACATGC GTGAGAGATTGCGGTCATCTCTCCACCGTGAATGCAGTTATTTTGACACC GTTTGGACCATCACTCCGAGCAGGCATAGTATGAAGCATCACATCGTGTG GCATATGGTAAAAAAACGAATGAGTCAACCGTGGACTAGCATGTCGAGTA TTTTCTCAGCGTTTCGGGTCTGAGAAATTACTCACTTGGTGATATGTAAC GATGAAGGCTGAAAAATCGCATCCATGCCTTGGTCTCAAATCGTCGGTTC CATGTATGTCCATGTCCAAAAGGGTTAAAAGTAGCAAAATATCGATTAGC AGCTCCAAGAATTTTCATCAATATCTTGTTTCGAAATACTCTGCGTACGC AGTATTCGGTATTTGGGGACCGTGGGGTATAGAGTAAAATATGACGCAAA ATCGGGAATTTAACAATAGATCGATTCTCATTTACGCATTTTCCAGAGCT CCATTCATCTGGAATGGTGATGGCACATCTGCTACTGCAATACGCCCGAG TAAGTTCGACCTGAACGGCTACAAGTCACCGGCAAAATTGGCGACTATCG GTATCCTCGTCGGCGTAGTTTGCATGTGGTAATGCAATTTGGTGACACAT CCGCACCCCCTGGACAACTACGAATGGGGCATTCGCAACCATCTGGAACT TTCATTAATTTTTTGGGGTAAACATTTATTTATTCGTTTACAAGTCTATG AATGGCCACTCTACAGATGGTCACCAGGTGGTCGTATACCCGGCGAACAG TCACACATGCATGTCCTGTTTATTTTCCGGGTGGTACTGTACAGGTTGAA TACCCTATTTGCCCGAACTTTTCGATGCTCCATGGTATATCGGGTACACT ACATATTATTCCCTTCACATGGACATCTTCCCTGACTCAAACAGATGTAG TATTCGTTCCAGATTTCTCGTATTTATTCGTGTCTTATACTCGTATTTGT CCGAGGGATGCACACCTGCCAGCGAGGCAAGGAAGAAAAAACAGAACACG AACATTTAATATTTGGCGAGTTCCTCGAACCCTTTGGAACAAATATATAT GGAGAAGATTGATATTCTCAGAAATAACCCATGAAGTCAGCCTGGTGACC ATAGCGTGTGCATTTGCGAAAGAAAGTGCCCAGACTACAAGACACCTACC CTACTCGACTTACCCTCGTGTAGACAGCGTCGCGGACCATGCTATGTCTT ACATGGTGAAGTTGTTCTATCGGGGACTACATGTAACACTCTTCCGAGAG CCATCACGCCATCACGTCGCAAGATGACATCGGCTGCAAAGACAGCAGTA GCACCAACGGCAGCATTTGGCTGTGTGGAACCATCAGCGGCTGTAGCACT CGAGCTTTCTTCTCGGTAGCAGCTGCCTATCTCGTGCTCATGCTAGCAGC CAGGCTTGAGTGTAGAGAGTCACCACTGTCTATAAATCACGACATGTTTT ATGGTTTGCACAAAGCTCGATCTTCTGCCAGTATTTTGGGCATTTTTGTT TATGCAGTGGTGAGAACACGATGCTCCCGGGAGAGACTGGCTCTCGAGGG GACACCGCCTGCTCTATGCGGATCGGTTCTAGGTCTTGGAATGTAGTGCG GAGCAAGCACTTGGGTTTTGTTCTGTCATAGATCGACTGCCCATCCAGGG TCGGACACAACTAGAAAGCTGCTCTGAGAAAGAGACAAAATACCATTGGT CGTTGTGTACGAGGCCAGGGTTCAGGAACCTCAGGAACGTCAAGAACGTG CTCTCCATATTACCCCCCCCTCTATGCGTCTCTGACCTGTAGAACAGTTA GAGCCGCGTTGGAGATGAATTTGGCGAGTCGGAGGCCGATACTGACGGGC CCAACTATAAATGCATGGGATTATACGGAAATATCAGCAATATTTCGAGT TATACAGCCGGGTATGTGTCGCGAGCTACACCTAGCAGTACCAACGAATC ATTAATGAATAGTGTGACATCGTCCCATTTTGTCTCTACGAGGTGTTAAC CATCATGAGAGCTCAACGAAGGCGTGTCTCGGGTTTAGCCAACATACCAT CAAATCTTGGCTGGTGATGATGTCCATTGTTGTTGCCATGACCTTGCACC TACTTTTCTCCTATCGGCCATTATAGTGGTTGAGCAGGCACGTTTACTGC CGGTTATTTCAATGACTGAGCGGGTGATTTGCGGCCGGTCATTGAAATAA TTGAGCTGTCTTGTTTTGCTGCCGGTTATTTCAATGATTGAGCGGTCATT GTAGTAATTGGGAAAAGGGGCATTTCGTTGGAAGCAGCGGAAAAGGTTTT TGCCTCAGCCTTCTGGGGGTTAAAAAAAAGAAAAAAAAGAAAAAAAAGGG CATTTCGTGTGTTATCATGAAGTAACGCGATGTCCGCGGCGGGTAGGTTC GCGAAGACCTCCTGCCGGATGTTTGATTACGGTACAACGAATTGTCATAA CCTGTATAGACTTGACCTTGCTGTAGTGATGGGAACCCAACATCTTCGCT TCGTCGTATTGATGGTGTTACGGGCATGTCAGCTCCCGCAGGTGACGTTG CAACAAGCGTATTAACTCTTTCAAGTTGATCGTACGAAGATTTAGTTGAA AACTATTCATGACTCCAAGAGTCTCATGAGGTGATATGAACCGTTGTCGT CTGCTCATAAAAATATGCTGCACAACCAGCGTGTTGTCCATGCACGCTGT AGCGTTAGCCAAAAGTGTCTACCGCTCTACATTATAATTCGATTTTAGCA AGGCTTCCGCCTATCATTTTATTACTGAGCTTCCTGCCCATAATGGTGAC TAGGGTGTAGGGTGACAATGGTCATTACTACCCTGTATCGGTAACAGGAA AGACAAGCTATGGTGTCTACCTGTTCTTCTACCGCTCTAATAAAATCCAG GCTGGATTTTTTACCTTTTAGGTTTCCATGCCGACTTGGTGGAGTTCGGT GTGGTGGGAGGAGACGTGGTTTGGTCGAGGCCGTTAGCTGCTCGGTAAGC CACGATTATTTCTTGACATTGGGAAATTTCGTGCGCACGATACCAGAGGT CGTCTGATGGTCCGTAACCTGCCAATCGGAGACGATACATATAGTTGTGA GGGCCGGGTCTACCTCGTCCCTTCTGGTGTCTCACACTACAATCAATTTT GTATGACCCGACACGTGGTTGGGTCTGCTCCGGGCGATCTAGGGCGAGTG ATGGAATTGGCTTACCTAAGAACACATTTCCCAATTTGGCAAAATCAGGC GTCGGTGGCTTTTTGCGTGGGTGATATGGCTTCATGTGGGCCAAGTGAAC GGAGACTTCTTGTGTCGCCGCTGGTATTTTCACACGGTATACTATGGGTG ACAGCTGAGAAGAAATGGTACACGGTCCACGCCACGGCTGAAACAATTTT GGATTCGGCTCGTCGGAGTCTTGATAAGGCTTGTGCACCAACACTTGTTG TCCTGCTTGGAAAACGGGAAAGTCGGGCAGGGCACTGTTAGCTTTTGCTC GTTTCTCTGCCCGTTAACCTATATTACGGCGAGCCAACTCGAATGCGAGT TGTAAGTTTTCATGGGTCTGCTGAGAGAACTCGCTTGTGTAGGCGCCAAT GCCATCGTGCGGGATACCGAGGATAATCCTTGTCGTCTGAATATGAGAAA GTATTGTGTTTCGTGCAAGGTGCCGCTGAAAGACGTGTTATGGGCAAGCT GCAAAAATGGCCGCAGGGATGCCCAATTGTCTTGAGCTATTTTGACACAG ACACGGACAACATTATATGTATCACCGAGTGAATCCATCCCGAAATAAAG TTACCCTGCGGATGGTAAACGGTCGTGCGTGTCTCTTGTAGTCAGACACA TTCTACAGCTGGTGCACGGCTTGATTCTCAATTCCTGACCCTGGTCGGAA TGTAAAATTTCTCGAGGTCCGAAAACGTCCACGACACGTCGATTGATTGC CGCCTCGATGGTCGCTGCTGCTTTATTCGGCACTGGAACTAATAGGGAAA TTTGAATGAGATGGTCGATGACTGTGAGCACATACTTGCACCAAGTCCCA GTTGGAAGAAAGAGTATGAAAAGTATTCCACTAGGTCTATCGAAATTCGC TCCAATGGTCTTGCTACTACTGGTACATGACCCACCGGCAATTTTGGGCG GTTGTGGGCGGTTTTCCGGCGTTGGCATGTCTGGCAATCATTGCACTAAG TTTTCACGTCGCGATGCACTGTTGACCACCAGTAACGATCAGGGATTTTA TCAAAGTTGAGCTTTATACGCTAGGTACCCTCCTGACATCGCGTGGTCGT GAAATGCGTCGAAAACTACCCCTATGAGAGCTTGTGGCACGACTAATTGG TTGTGGAATGTGCTCCGTTTCCTCAAGTGCCCGGGTAAGTACGATCTGAC CAGGAGTTCGTCTTGCTCGAAATAATACCACATGGATGGTACTGTTTCGT TATGCGGTAACGGAGGTTTATTATCTGCCAGATATTTCAAGTACGGCCCA AATTCAAGGCTTGAGCTTGACATAACGTTTTCGGATCTGCTGATGTGAAT ACCTGAGTCGCGCTGGCGTAGATCGGACTCACATCAAACATCTCCCGGTC GCTCACCGGTTCAACGTTGTTCAGCTTCTCTACCGAAGGTTGATAGGGCC TGTGCGGTTGCTGAACGTGGAGCATGGGATTTTTAAGTGTGTTGAGGCAA ATCGGTGCTAACACCGGAGCTAATGCTATTGGCTTCAAAATTGAACAGCC GCGACAGCGAGTTGAGGAGTACATGTAATTTTGCTGGCTTGTGTTCTACG GTAAAATCGTATGGCTGTAATGCGATAGCCCCACGTTTAAGCATATTTGT TGTGTTTTGTATCGCGTAAAGATACCTCAGTGCGGCATGGTCGGTCGTGC ACGTTAAATTTCTTCCCAGTAAATAAGGCCGCCAGTGATTAATCGCTAGT ACAGCAGCATAGTATTCTTTCAGCGTGGTCGAGTAGTGTAGACAATTGAT GATTTATTTACTGAAGTAGGAAACTATGACTAATTCCACATCTTCTTTGT GTTGCGCCAGAAAAGCGTCCGTTCCAATATCGCTTGCATCGACGTGAATT ACAAAATATTTGGAAAAATCCGGGAGCTGCAAGACTGGTGCTGACGAAAA TAATGGTTTAACTTCAAAGAGAGTGTGGTCTTGCTCACGTCCCCAGAATT TTCCAATTTTCTTGTTTTTGGCAATTTATTTGCAGGTGAGATGCGCTAGC GGTTTAATGACTTCCATTAAATTAGGTATGAACTTACGTACGAATGTATT CATGCGTAGCACTGATGGACGCTCTTTAATCGTTGTCGGTTTGGGCAGAT CGACGATGGCTTTGATACGGTCTTGCCGTATGCTAATTCCGTTTGCGGAG AGAACGTTACTTAAGTATCTTCAGCGGGTCCAAATTGGATCTTAGATGGC TTTGAAGTCAAACCAGCCGCTTGGGGTGCCTTCCAGCAGCTGTAGATGGG GTTTCTACGTAGCTGAACACGCGATTTAATCGTCGAGATGTACGAGCAGG CCGTTGTGCTGTTGGAAATTGGAAAACGTTAATGTCAAGATTCTTTGGAA CAACCATGGTGCGTTCGTAATGCCAAATAGCGTGCCCTTGAAATACGTAT TTATCCTTGTTCGTGACAGGCCGTTTTTTCGATATCTGGTTCTACTACTG GTATCTGGTGATGGCGGCTTCCAAATCGAACACGGAGATAAACTGTGCAC CCTCTACATTATCAATGTGTGTCGCCATATCTGGCATAGGTCAAGTTTCA CGGACAGGATACTTATTTATCGTCGCGCGATAATCGACGCAGAAACGCAG CCGGCCGTCACTCCGAATTACAAGGGTGACGAGTGAACCCCATGGGCTAG AGCATTGTTCTGCAATACCCTATGCTTCTATTTTGTCGACACATTGATCG ATTACGTGTTGGGTTCGAGGATTTGTACGGTATGCTGGCTTGTCTACTGG TTTGGTGCCTGGTTACAGAGAAGGTTTGCCTTCCGCCAGGGTACACGTCC CTAATTCATAAAGCGAAAGCGAAAGTACAGTAGCAACTACCCAATGTATG TCGTGACGCCCACGGCTATCTCGTGTCTAGCGGGAATGTTACAGGACCAA AAGGCATCGTCTGTCCAAGTCCAAGGTCGTTCGAAATGCACCTATGATAC TGTTGTCCAGTAGCGACTTATCCGAGCCTGAATGGGTCATGTGGTCTCCC CGAGTGTGAGGCTAAAACGAGTGTATCCGCGAATTTCAAGCAGACATCCG TCGGCAGATCGCAAATTTATGGCCACCGCTGGTACAGTGTGATCTTCTGG GGAGCGAAGTATCTTGGTTGTGCGGATGAACTGCTCAGACACGCACGGAA TATCACAGCGCTGTCGACCGTGTCGCTGCGCACTTTTTCACCGTCTATGA TGGCTGGGATTCGCACTCTCTGCGAAGAAAGATTAGTATAAAAAATTGAA GTCTTCAGTGCGATAGGATAACGTGCGAGAGAGCTTTTATAAGCGGCAAA TTATTTTGTCGTCGATTGTCTGCGCCTGCAAAGTAGACTGGTGCCCACTT TGTCTCATAGTACTCATATACAGAGACACTGAGATGCGAGTTTATGGCTC GCTGCGTGCTGTTTTTCGGTGAATACTTGTACCCATGACAAGGAAACAAG CAGTGTTTCTGAAGGTTTGATGCACCGCCGTACCCGCCGTAAGACAGTCA GTCGACCATTAGTTTGCTCTCTTCGAGCTTTGGACAGCGGCCCGTCACAT GATGTATCCAGGGTTCCAATGGGTCTGGGCGCATTAATCGTGATCACGAG AGCATGCCGCTACAGTCTGTTGGGCAAAATTCTGGATAAAACAGCAGGGG CCTCCGTGGAGGGTTCTGAAATCGGGTGTAACTCATGATGATCGAGTGCT TGATATATCTTTGAATCGACCAGACTCGAAGTTTCCAATATTTCAGTACG TTGCACGACAACAGGTAAGTCTGGCACAAGGTTGCATGCTGCCCTTCTAC CCCAACGATCTCACCAGCCGTTTTCACGCGATTGAGTCGCCTACGCTGCC GTCTTAGCGCGAGTTCCCCCCAATCGCTGGGGGTATTAGCTGCAAATACC GCCAATTTTCCGCAACCATGCGCAGGTGGCTGACCCGTCAACACGGTGTG ACCGGTGCGTCGGGGTCCCGCTGACAAGGGGAGGTAATGGCGGTGGTGTT GCAGTAGCGGAGGTGGCGAAGTGGCAGCCCGCGACGAGTACAGCGAGGGC GTGCTGTGCCCCTCCTTGAGGCTCGTTCGTGCGGCTCTCGTGCTTTATGA TATGAAGGCCAGACAGAGGTAGCTGTCGTAGCCGTCTCTGTGGTCTCCTC GCTAGAACA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig173:4193..18751-

>mRNA_H-paniculata_contig173.4061.1 ID=mRNA_H-paniculata_contig173.4061.1|Name=mRNA_H-paniculata_contig173.4061.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=486bp|location=Sequence derived from alignment at H-paniculata_contig173:4193..18751- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTTCGGTCACATCGTCGACCCATGAACCCCCCGGTGGCGGCTCAAT
GACCCACGACTTCACTGCCGTTCAGCGAATCGACCTGATCTACATTGCGA
TGTCTTCGGTCACATCGTCGACCCATGAACCCCCCGGTGGCGGCTCAATG
ACCCACGACTTCACTGCCGTTCAGCGAATCGACCTGATCTACATTGCGGT
GGCTGACCCGTCAACACGGTGTGACCGGTGCGTCGGGGTCCCGCTGACAA
GGGGAGGTAATGGCGGTGGTGTTGCAGTAGCGGAGGTGGCGAAGTGGCAG
CCCGCGACGAGTACAGCGAGGGCGTGCTGTGCCCCTCCTTGAGTGGCTGA
CCCGTCAACACGGTGTGACCGGTGCGTCGGGGTCCCGCTGACAAGGGGAG
GTAATGGCGGTGGTGTTGCAGTAGCGGAGGTGGCGAAGTGGCAGCCCGCG
ACGAGTACAGCGAGGGCGTGCTGTGCCCCTCCTTGA
back to top