prot_H-paniculata_contig17290.4058.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17290.4058.1
Unique Nameprot_H-paniculata_contig17290.4058.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
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BLAST of mRNA_H-paniculata_contig17290.4058.1 vs. uniprot
Match: A0A6H5LB52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB52_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 5.410e-17
Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 0 
Query:    1 FVKTWKIGDVSEYLYQAGMRTKPKPERKRRLDRRGQLSHSTTARATATAPMGAAAAGGAAISATNPDPTTIACADKDKIGAMGGAGGPGQK-SLLVPVRQWRAHETRISSIAGASYHGKADLLVTAG 126
            FVKTW++GD++E++YQ GMR +PKP RK R  R G+   +T   ATA A         + ++A  P              AM  + G  Q  SLL P+ QW+AH+T ++S+ GA Y GK DLLVTAG
Sbjct:  835 FVKTWRLGDITEHVYQTGMRARPKPPRKSRSGR-GRKGSATAGEATAQA---------SPLAAVPP--------------AMADSPGTQQTTSLLQPMHQWQAHKTTVTSVHGADYRGKLDLLVTAG 937
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BLAST of mRNA_H-paniculata_contig17290.4058.1 vs. uniprot
Match: D7FNP1_ECTSI (Similar to WD repeat domain 49 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP1_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.060e-14
Identity = 50/129 (38.76%), Postives = 68/129 (52.71%), Query Frame = 0 
Query:    1 FVKTWKIGDVSEYLYQAGMRTKPKPERKRRLDRRGQLSHSTTARATATAPMGAAAAGGAAISATNPDPTTIACADKDKIGAMGGAGGPGQK---SLLVPVRQWRAHETRISSIAGASYHGKADLLVTAG 126
            FVKTW++GD++E++YQ GMR +PK      L R+ +    T   ATA   +   AAG  A+                       A  PG +   SLL P+ QW+AH+T ++S+ GA Y GK DLLVTAG
Sbjct:  907 FVKTWRLGDITEHVYQTGMRARPK------LPRKSRSGRGTKGSATAGEQVSPLAAGPPAM-----------------------ADSPGTQQTTSLLQPMHQWQAHKTTVTSVQGADYRGKLDLLVTAG 1006
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17290.4058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LB52_9PHAE5.410e-1742.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNP1_ECTSI1.060e-1438.76Similar to WD repeat domain 49 n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17290contigH-paniculata_contig17290:935..2523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17290.4058.1mRNA_H-paniculata_contig17290.4058.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17290 935..2523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17290.4058.1 ID=prot_H-paniculata_contig17290.4058.1|Name=mRNA_H-paniculata_contig17290.4058.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
FVKTWKIGDVSEYLYQAGMRTKPKPERKRRLDRRGQLSHSTTARATATAP
MGAAAAGGAAISATNPDPTTIACADKDKIGAMGGAGGPGQKSLLVPVRQW
RAHETRISSIAGASYHGKADLLVTAGV
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