mRNA_H-paniculata_contig17284.4053.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17284.4053.1
Unique NamemRNA_H-paniculata_contig17284.4053.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Match: A0A290WNJ8_9PHAE (Lycopene beta-cyclase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A290WNJ8_9PHAE)

HSP 1 Score: 449 bits (1156), Expect = 6.100e-154
Identity = 221/266 (83.08%), Postives = 241/266 (90.60%), Query Frame = 1
Query:   22 LKHTAEGSTVSLEDGTSLTCRLILDCSGHYSELVEKDGPHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKEGELSAKELKELIDIPTFLYAMPMGKAANGRSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIEVTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAASTGVATAIASELNKGGSGAPEAAARRAYQALWPANAKLQRDFHVFGGEFLMAQEATILRGFFNGFFKLPLPLWA 819
            +KHTAEGSTV LE+G  L+CRL++DCSGHYSELVE+DG +NPGVQIAYGAEVEVKDGHAPYDE AMLFMDYRTDY+   E S +E +EL DIPTFLYAMPMGKA+NGRSKIFFEETSLVARPPI+FDLCK+RLY+RL HHGIEVTKV+DEELCYIPMGG +PKL+QRVVAFGGASGLVHAAT YMHVRMLAAS GVA AIA+EL  GG GA  AAARRAYQALW A AKLQRDFHVFGGEFLMAQ+ +ILRGFFNGFFKLPLPLWA
Sbjct:  159 VKHTAEGSTVELENGMKLSCRLLVDCSGHYSELVERDGVNNPGVQIAYGAEVEVKDGHAPYDEKAMLFMDYRTDYINPEESSPEEQRELRDIPTFLYAMPMGKASNGRSKIFFEETSLVARPPIAFDLCKERLYKRLKHHGIEVTKVVDEELCYIPMGGPIPKLDQRVVAFGGASGLVHAATGYMHVRMLAASRGVAEAIATELKSGGPGASRAAARRAYQALWSAKAKLQRDFHVFGGEFLMAQDTSILRGFFNGFFKLPLPLWA 424          
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Match: A0A290WNI6_9PHAE (Lycopene beta-cyclase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A290WNI6_9PHAE)

HSP 1 Score: 442 bits (1137), Expect = 2.840e-151
Identity = 216/266 (81.20%), Postives = 240/266 (90.23%), Query Frame = 1
Query:   22 LKHTAEGSTVSLEDGTSLTCRLILDCSGHYSELVEKDGPHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKEGELSAKELKELIDIPTFLYAMPMGKAANGRSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIEVTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAASTGVATAIASELNKGGSGAPEAAARRAYQALWPANAKLQRDFHVFGGEFLMAQEATILRGFFNGFFKLPLPLWA 819
            ++H+ EG++V LE+G  + CRL++DCSGHYSELVE+ G HNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYV + +LSA+E K L +IPTFLYAMPMG A+NGR KIFFEETSLVARPPISFDLCK+RL++RL HHGIEVTKV+DEELCYIPMGGA+P LNQRVVAFGGASGLVHAAT YMHVRMLAAS  V+ AIA+EL KGG G  EAAARRAYQALWPA AKLQRDFHVFGGEFLMAQ+A ILRGFFNGFFK+PLPLWA
Sbjct:  160 MEHSPEGTSVCLENGQQIDCRLLVDCSGHYSELVERVGEHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVDKADLSAEEAKGLDEIPTFLYAMPMGTASNGRKKIFFEETSLVARPPISFDLCKERLHRRLKHHGIEVTKVMDEELCYIPMGGAMPNLNQRVVAFGGASGLVHAATGYMHVRMLAASGPVSRAIAAELKKGGPGTSEAAARRAYQALWPAKAKLQRDFHVFGGEFLMAQQAPILRGFFNGFFKVPLPLWA 425          
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Match: A0A290WNJ9_9PHAE (Lycopene beta-cyclase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A290WNJ9_9PHAE)

HSP 1 Score: 442 bits (1137), Expect = 6.350e-151
Identity = 217/266 (81.58%), Postives = 236/266 (88.72%), Query Frame = 1
Query:   22 LKHTAEGSTVSLEDGTSLTCRLILDCSGHYSELVEKDGPHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKEGELSAKELKELIDIPTFLYAMPMGKAANGRSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIEVTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAASTGVATAIASELNKGGSGAPEAAARRAYQALWPANAKLQRDFHVFGGEFLMAQEATILRGFFNGFFKLPLPLWA 819
            +KH +EG+TV L+DG  L CRL+LDC+GHYSELVEKDG HNPGVQIAYGAEVEVKDGH PYDE AMLFMDYRTDYV + +LSA+E KEL ++PTFLYAMPMG+   GR +IFFEETSLVARPPISFDLCK+RL +RL HHGIEVTK+LDEELCYIPMGGALPKL+QRVVAFGGASGLVHA+T YMHVRMLAAS  VA AIA EL KGG GAP AAARRAYQALWPA AKLQRDFHVFGGEFLMAQ A  LRGFFNGFFK+PLPLWA
Sbjct:  162 VKHASEGTTVCLDDGVELRCRLLLDCTGHYSELVEKDGVHNPGVQIAYGAEVEVKDGHEPYDEKAMLFMDYRTDYVSKDDLSAQEAKELEEVPTFLYAMPMGQGPEGRKRIFFEETSLVARPPISFDLCKERLKRRLEHHGIEVTKLLDEELCYIPMGGALPKLDQRVVAFGGASGLVHASTGYMHVRMLAASFPVAHAIARELKKGGPGAPAAAARRAYQALWPAKAKLQRDFHVFGGEFLMAQHAPALRGFFNGFFKIPLPLWA 427          
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Match: A0A290WNI7_UNDPI (Lycopene beta-cyclase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A290WNI7_UNDPI)

HSP 1 Score: 436 bits (1121), Expect = 1.220e-148
Identity = 215/267 (80.52%), Postives = 239/267 (89.51%), Query Frame = 1
Query:   22 LKHTAEGSTVSLEDGTSLTCRLILDCSGHYSELVEKDGPHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKE-GELSAKELKELIDIPTFLYAMPMGKAANGRSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIEVTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAASTGVATAIASELNKGGSGAPEAAARRAYQALWPANAKLQRDFHVFGGEFLMAQEATILRGFFNGFFKLPLPLWA 819
            ++H+AEG+T+ L+DG  + CRL++D SGH+SELVE+ G HNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYV +  ELS KEL+EL +IPTFLYAMPMG+A NGR +IFFEETSLVARPPISFDLCK+RLY+R+ HHGIEVTKV+DEE CYIPMGGA+P L QRVVAFGGASGLVHAAT YMHVRMLAAS GVA AIASEL K G GAP+AAARRAYQALWPA AKLQRDFHVFGGEFLMAQ+A +LRGFFNGFFKLP  LWA
Sbjct:  162 VEHSAEGTTMCLDDGKLINCRLVVDSSGHFSELVERVGEHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVDDKSELSEKELRELDEIPTFLYAMPMGEAPNGRRRIFFEETSLVARPPISFDLCKERLYRRMKHHGIEVTKVMDEEFCYIPMGGAMPVLTQRVVAFGGASGLVHAATGYMHVRMLAASGGVARAIASELKKEGPGAPQAAARRAYQALWPAKAKLQRDFHVFGGEFLMAQQAPVLRGFFNGFFKLPTSLWA 428          
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Match: A0A290WNI4_PETFA (Lycopene beta-cyclase n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A290WNI4_PETFA)

HSP 1 Score: 433 bits (1114), Expect = 1.190e-147
Identity = 211/266 (79.32%), Postives = 236/266 (88.72%), Query Frame = 1
Query:   22 LKHTAEGSTVSLEDGTSLTCRLILDCSGHYSELVEKDGPHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKEGELSAKELKELIDIPTFLYAMPMGKAANGRSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIEVTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAASTGVATAIASELNKGGSGAPEAAARRAYQALWPANAKLQRDFHVFGGEFLMAQEATILRGFFNGFFKLPLPLWA 819
            ++H+AEG++V LEDG  + CRL++DCSGHYSELVE+ G HNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYV +  LS ++ + L DIPTFLYAMPMG A NG+ +IFFEETSLVARPPI FDLCK+RLY+RL HHGIEVTKV+DEELCYIPMGGA+P L QRVVAFGGASGLVHAAT YMHVRMLAA+  V+ AIA+EL KGG G  EAAARRAYQALWP+ AKLQRDFHVFGGEFLMAQ+A +LRGFFNGFFKLPLPLWA
Sbjct:  160 MEHSAEGTSVCLEDGQKIDCRLLVDCSGHYSELVERVGDHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVDKATLSPEDAQGLDDIPTFLYAMPMGAAPNGQRRIFFEETSLVARPPIEFDLCKERLYRRLEHHGIEVTKVMDEELCYIPMGGAMPSLTQRVVAFGGASGLVHAATGYMHVRMLAAAGPVSRAIAAELKKGGPGTSEAAARRAYQALWPSKAKLQRDFHVFGGEFLMAQKAPMLRGFFNGFFKLPLPLWA 425          
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Match: A0A290WNK2_9PHAE (Lycopene beta-cyclase n=1 Tax=Saccharina sculpera TaxID=416830 RepID=A0A290WNK2_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 3.440e-146
Identity = 208/266 (78.20%), Postives = 235/266 (88.35%), Query Frame = 1
Query:   22 LKHTAEGSTVSLEDGTSLTCRLILDCSGHYSELVEKDGPHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKEGELSAKELKELIDIPTFLYAMPMGKAANGRSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIEVTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAASTGVATAIASELNKGGSGAPEAAARRAYQALWPANAKLQRDFHVFGGEFLMAQEATILRGFFNGFFKLPLPLWA 819
            ++H+AEG+T+ L+DG  + CRL++D SGH+SELVE+ G HNPGVQIAYG EVEVKDGHAPYDENAMLFMDYRTDYV + ELS +E KEL   PTFLYAMPMG+A NGR +IFFEETSLVARPPISFDLCK+RLY+R+ HHGIE+TKV+DEE CYIPMGG++P L QRVVA GGASGLVHAAT YMHVRMLAAS GVA AIASEL KGG GA EAAARRAYQALWP+ AKLQRDFHVFGGEFLMAQ+A +LRGFFNGFFKLP+ +WA
Sbjct:  161 VEHSAEGTTMCLDDGQQINCRLVVDSSGHFSELVERVGEHNPGVQIAYGVEVEVKDGHAPYDENAMLFMDYRTDYVDKSELSEEESKELDGTPTFLYAMPMGEAPNGRRRIFFEETSLVARPPISFDLCKERLYRRMKHHGIEITKVMDEEFCYIPMGGSMPVLTQRVVALGGASGLVHAATGYMHVRMLAASGGVARAIASELKKGGPGASEAAARRAYQALWPSKAKLQRDFHVFGGEFLMAQQAPVLRGFFNGFFKLPISVWA 426          
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Match: A0A6H5JIL6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIL6_9PHAE)

HSP 1 Score: 432 bits (1110), Expect = 3.820e-146
Identity = 210/266 (78.95%), Postives = 235/266 (88.35%), Query Frame = 1
Query:   22 LKHTAEGSTVSLEDGTSLTCRLILDCSGHYSELVEKDGPHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKEGELSAKELKELIDIPTFLYAMPMGKAANGRSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIEVTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAASTGVATAIASELNKGGSGAPEAAARRAYQALWPANAKLQRDFHVFGGEFLMAQEATILRGFFNGFFKLPLPLWA 819
            L+H+A+G++V L+DG  + CR+++DCSGHYSELVE+ G HNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDY  + ELS +E++ L D PTFLYAMPMG A NG+ +IFFEETSLVARPPISFDLCK+RLY+RL HHGIEVTKV+DEELCYIPMGGA+P L QRVVAFGGASGLVHAAT YMHVRMLAAS  V+ AIA+EL K G G  EAAARRAYQALWP+ AKLQRDFHVFGGEFLMAQ A+ LRGFFNGFFKLPLPLWA
Sbjct:  231 LEHSADGTSVRLDDGQQIDCRILVDCSGHYSELVERVGEHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYADKAELSPEEVEGLDDTPTFLYAMPMGAAPNGQRRIFFEETSLVARPPISFDLCKERLYRRLKHHGIEVTKVMDEELCYIPMGGAMPSLTQRVVAFGGASGLVHAATGYMHVRMLAASGAVSRAIAAELKKDGPGTSEAAARRAYQALWPSKAKLQRDFHVFGGEFLMAQPASTLRGFFNGFFKLPLPLWA 496          
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Match: A0A290WNK0_9PHAE (Lycopene beta-cyclase n=3 Tax=Sargassum TaxID=3015 RepID=A0A290WNK0_9PHAE)

HSP 1 Score: 411 bits (1057), Expect = 5.230e-139
Identity = 206/267 (77.15%), Postives = 231/267 (86.52%), Query Frame = 1
Query:   22 LKHTAEGSTVSLEDGTSLTCRLILDCSGHYSELVEKDGPHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKEGELSAKELKELIDIPTFLYAMPMGKAANGRSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIEVTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAASTGVATAIASELNKGGS-GAPEAAARRAYQALWPANAKLQRDFHVFGGEFLMAQEATILRGFFNGFFKLPLPLWA 819
            ++H+ EG+++ L+DG  + CRL++DCSGH SELVE+ G  NPGVQIAYGAEVEV DGHAPYDENAMLFMDYRTDYV E ELSA EL+EL ++PTFLYAMP+GK+ NGR KIFFEETSLVARPPISFDLCK+RL +RL HHGI V KVLDEE CYIPMGGA+PKL+QRVVAFGGA+ LVHAAT YM VRMLAA+ GVA AIASEL K     A EAAARRAYQALWPA A+LQRDFHVFGGEFLMAQ A ILRGFF+GFF+LPLPLWA
Sbjct:  156 VEHSTEGTSLRLDDGERIDCRLLVDCSGHRSELVERSGVDNPGVQIAYGAEVEVLDGHAPYDENAMLFMDYRTDYVAETELSADELRELDEVPTFLYAMPLGKSPNGRRKIFFEETSLVARPPISFDLCKERLDRRLKHHGITVAKVLDEEFCYIPMGGAMPKLDQRVVAFGGAAALVHAATGYMQVRMLAAAGGVARAIASELTKEDHPAASEAAARRAYQALWPAKARLQRDFHVFGGEFLMAQHAPILRGFFDGFFRLPLPLWA 422          
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Match: A0A835YM92_9STRA (Lycopene beta cyclase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM92_9STRA)

HSP 1 Score: 320 bits (820), Expect = 1.380e-103
Identity = 162/275 (58.91%), Postives = 201/275 (73.09%), Query Frame = 1
Query:   16 QQLKHTAEGSTVSLEDGTSLTCRLILDCSGHYSELVEKDGPHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKEGELSAKELKELIDIPTFLYAMPMGKAANG---RSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIEVTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAASTGVATAIASELNKGGSGA----PEAAARRAYQALWPANAKLQRDFHVFGGEFLMAQEATILRGFFNGFFKLPLPLWA 819
            + ++HTA GST  L+ G  +T R+ILDCSGH ++LVE+ GPH+PG QIAYG E +VKD   PYD +AMLFMDYRT +       A   + L  +PTFLYAMP+G++ +G     ++FFEETSLVARPP++ + CK+RLY+RL HHGIEVTKV +EE C IPMGG+LPK +QRVV F GA GLVHA+T YM VRMLAA+   A AI       G+      P+AAARRAY A+WPA A++QRDFH+FGGEFLM Q+   LRGFFN FFK+PLP WA
Sbjct:  149 ETVQHTATGSTFKLDTGDVVTARMILDCSGHNTKLVERQGPHDPGFQIAYGMECDVKDDLGPYDPDAMLFMDYRTSFAP-----AARQQRLRAVPTFLYAMPLGRSGSGGGGAQRVFFEETSLVARPPMAIEECKERLYERLAHHGIEVTKVHEEEFCVIPMGGSLPKFDQRVVGFAGAGGLVHASTGYMQVRMLAAAKPAADAIGRAFAAAGADRANFNPDAAARRAYLAIWPAAARVQRDFHMFGGEFLMQQDVEALRGFFNAFFKVPLPYWA 418          
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Match: A0A0G4F4K8_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F4K8_VITBC)

HSP 1 Score: 288 bits (736), Expect = 4.430e-90
Identity = 153/274 (55.84%), Postives = 195/274 (71.17%), Query Frame = 1
Query:   22 LKHTAEGSTVSLEDG--TSLTCRLILDCSGHYSELVEKDGPHNPGVQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKE---GELSAK-ELKELIDIPTFLYAMPMGKAANGRSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIEVTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAASTGVATAIASELNKGGSG--APEAAARRAYQALWPANAKLQRDFHVFGGEFLMAQEATILRGFFNGFFKLPLPLWA 819
            ++H   GS+V L+DG  T L  +LI+DC+GH S+L+E+DG H+PG QIAYG   E +    P+DE AMLFMDYRTDY+ E   GE + + +L + +  PTFLY MP G++A+G  +IF EETSLVARPP+SFD CK+R  +RL + G+E  K+ +EE CYIPMGGA+PK NQRV+AFGGA+G+VHAAT YM  RM++     A AIA E+ +   G  AP+ AAR AY ALWPA  + QR+F VFGGEFLM Q    LR FF GFF L LP+WA
Sbjct:  209 VRHDDTGSSVRLQDGRSTELRTKLIVDCTGHESKLIERDGRHDPGFQIAYGIMCECE--RHPFDEGAMLFMDYRTDYITEAQKGEPTMQTDLDKAVREPTFLYVMPFGESASGLRRIFLEETSLVARPPMSFDECKERFKKRLAYLGVEPQKIEEEEFCYIPMGGAIPKRNQRVIAFGGAAGVVHAATGYMICRMMSGVAPTAEAIAKEIRQPIDGVFAPDRAARTAYAALWPAQFRRQREFTVFGGEFLMQQNVHNLRAFFRGFFNLELPMWA 480          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17284.4053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A290WNJ8_9PHAE6.100e-15483.08Lycopene beta-cyclase n=1 Tax=Ishige okamurae TaxI... [more]
A0A290WNI6_9PHAE2.840e-15181.20Lycopene beta-cyclase n=1 Tax=Punctaria latifolia ... [more]
A0A290WNJ9_9PHAE6.350e-15181.58Lycopene beta-cyclase n=1 Tax=Dictyopteris undulat... [more]
A0A290WNI7_UNDPI1.220e-14880.52Lycopene beta-cyclase n=1 Tax=Undaria pinnatifida ... [more]
A0A290WNI4_PETFA1.190e-14779.32Lycopene beta-cyclase n=2 Tax=Scytosiphonaceae Tax... [more]
A0A290WNK2_9PHAE3.440e-14678.20Lycopene beta-cyclase n=1 Tax=Saccharina sculpera ... [more]
A0A6H5JIL6_9PHAE3.820e-14678.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A290WNK0_9PHAE5.230e-13977.15Lycopene beta-cyclase n=3 Tax=Sargassum TaxID=3015... [more]
A0A835YM92_9STRA1.380e-10358.91Lycopene beta cyclase chloroplast n=1 Tax=Tribonem... [more]
A0A0G4F4K8_VITBC4.430e-9055.84Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17284contigH-paniculata_contig17284:1095..5344 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score438.3
Seed ortholog evalue2.6e-120
Seed eggNOG ortholog2880.D8LTG3
Preferred nameLCYB
KEGG rclassRC01004,RC01612,RC01964,RC02020,RC02021
KEGG koko:K06443,ko:K06444,ko:K14593
KEGG ReactionR03824,R04801,R05341,R06960,R06962,R06963,R07320,R07321,R07840,R07856
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
KEGG ModuleM00097
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009509,GO:0009536,GO:0009975,GO:0009987,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016853,GO:0016860,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045436,GO:0046148,GO:0071704,GO:1901576
EggNOG free text desc.tetraterpenoid biosynthetic process
EggNOG OGs2CN09@1,2QT2F@2759
EC5.3.99.8,5.5.1.18,5.5.1.19
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons5
Model size840
Cds size840
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17284.4053.1prot_H-paniculata_contig17284.4053.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17284 1095..5344 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929362.562994-CDS-H-paniculata_contig17284:1094..12811622929362.562994-CDS-H-paniculata_contig17284:1094..1281Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17284 1095..1281 +
1691480830.8135793-CDS-H-paniculata_contig17284:1094..12811691480830.8135793-CDS-H-paniculata_contig17284:1094..1281Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17284 1095..1281 +
1622929362.5777645-CDS-H-paniculata_contig17284:1685..18641622929362.5777645-CDS-H-paniculata_contig17284:1685..1864Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17284 1686..1864 +
1691480830.8235407-CDS-H-paniculata_contig17284:1685..18641691480830.8235407-CDS-H-paniculata_contig17284:1685..1864Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17284 1686..1864 +
1622929362.5890844-CDS-H-paniculata_contig17284:3293..34461622929362.5890844-CDS-H-paniculata_contig17284:3293..3446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17284 3294..3446 +
1691480830.8307915-CDS-H-paniculata_contig17284:3293..34461691480830.8307915-CDS-H-paniculata_contig17284:3293..3446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17284 3294..3446 +
1622929362.6005023-CDS-H-paniculata_contig17284:4694..47541622929362.6005023-CDS-H-paniculata_contig17284:4694..4754Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17284 4695..4754 +
1691480830.8381228-CDS-H-paniculata_contig17284:4694..47541691480830.8381228-CDS-H-paniculata_contig17284:4694..4754Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17284 4695..4754 +
1622929362.6186516-CDS-H-paniculata_contig17284:5083..53441622929362.6186516-CDS-H-paniculata_contig17284:5083..5344Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17284 5084..5344 +
1691480830.8454516-CDS-H-paniculata_contig17284:5083..53441691480830.8454516-CDS-H-paniculata_contig17284:5083..5344Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17284 5084..5344 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17284.4053.1

>prot_H-paniculata_contig17284.4053.1 ID=prot_H-paniculata_contig17284.4053.1|Name=mRNA_H-paniculata_contig17284.4053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp
GPTTEQQLKHTAEGSTVSLEDGTSLTCRLILDCSGHYSELVEKDGPHNPG
VQIAYGAEVEVKDGHAPYDENAMLFMDYRTDYVKEGELSAKELKELIDIP
TFLYAMPMGKAANGRSKIFFEETSLVARPPISFDLCKDRLYQRLNHHGIE
VTKVLDEELCYIPMGGALPKLNQRVVAFGGASGLVHAATAYMHVRMLAAS
TGVATAIASELNKGGSGAPEAAARRAYQALWPANAKLQRDFHVFGGEFLM
AQEATILRGFFNGFFKLPLPLWAVSQSSS*
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mRNA from alignment at H-paniculata_contig17284:1095..5344+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17284.4053.1 ID=mRNA_H-paniculata_contig17284.4053.1|Name=mRNA_H-paniculata_contig17284.4053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4250bp|location=Sequence derived from alignment at H-paniculata_contig17284:1095..5344+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACCCACAACCGAACAACAGCTGAAACATACCGCGGAAGGCAGCACGGT CAGCCTGGAGGATGGCACATCGCTCACCTGCCGGCTCATACTGGACTGCA GCGGCCACTACTCAGAGCTCGTGGAAAAAGACGGCCCGCACAACCCTGGG GTGCAGATCGCCTACGGAGCAGAGGTGGAAGTTAAGGGTACGTATGTTAC CTGTGGCAGGAGAGGTCCCCATGTCGGCGAGAGAGGATGGTTGAGTTTGC TTGCCTTGGGAGAAGACGCGGAAACGCCTTCCCGTCTTGATTCAGGGGCA GCAAGCAATCTATAGTGGAAACCCTCGTTTTATCTCTTGATGTTTTTCCC TACTCCCCTTTATGTGAAAAGATGGATATTTACATGTATGTAAGAAAACA AAATGTCATGTACACACCACAGGCTGTTAACGACATCCTTCATCTGTTAC GGCAGTATATTAGGAGCGATAATAATATGTAATAATGATTGATTGATGAT GGCCATCGTTTTTCGGAACATTAACCCCCCCTCCCCTATTTTTCTCGCGG CGGCCGGCGTCGCATCCTTCCGCGTAACGGTTCCTCAACAGATGGGCACG CACCTTACGACGAGAACGCCATGCTGTTCATGGACTACCGTACGGATTAC GTGAAAGAAGGCGAGCTATCGGCGAAGGAGCTGAAGGAACTGATCGACAT CCCGACCTTCTTGTACGCCATGCCCATGGGCAAAGCCGCCAACGGTCGTT CCAAGATCTTCTTTGAAGAGGTAAGGGGTTTCGAGTTGCCGGAGGGGGGG TGGTGAGGAGGAGGGAGGTGAATTGGTCGAGTACCAGGACCTCTCGGCGC CTCTTCGGCCAGGTACGACACGGTCTACTGTTCGATACCTCGTGGCTTGG ACGGGTTTGGGCTTGTGATGCGAGTGTAACGACAAGAGTTTTGCATTTTT TTTTTTGTTAGGGTGTAGACGTACGTGAGAGTGACCGAAAGGGAGGGCAG ACAGCAGCTCGCCCAGTCCTTGTTTTCCTACTAAATTCGAATAAAATTCG GAAAAGATTCGCGTTAAGAATCAGTAATCGAAACATTAAATAAAACTCTG AGAACATTTCCAGGAACGGTCGCAATCGTTACACACACACACACACCCAA CACAGATAGTGCCACACGCATAATAACCAGGAAGAATTAAAGAATACAGA TGGATGGGAGAACCACCTAACACGCGTATAACCCGACAGCTATGACAAAA TCGTTCAAGAGAGTTATCGCAGTATGAAAACATGAGATAGTTTTTAATAT GAACGAGTTTGATAACCCTCGAAAGACGAGAACAAAAACGAAATTTACAC GCACACCACCAGGGGGGATTCCCATATTCGTGATGTCCACATACTTTTGC CATAGTTGGTAGAAATATAGCTCTAAATCCTCCATCCAGTAACACTCCGT CGTGTCGATGTTGAGGTTATTATCTAGCTGACTTGAACATGTCATTTGTG TACACTTGTCAACAAAATTTAGAGGATGACACAAGAAGCGGGGCGGACAT GGAAGTAGTCTTGATATGAGCGTGAATAAAATAAACGTTGATTTCACTAT CTCAAATTCTCGTTAGTGTCTGTAGTACCTTGATACCTTGACCCGCGTCC CATTCAGTTTAACAACAGTATTAATTCCGCTGTATCCATTTGAAGGTTTT GGAGTCGTTTTCAGTAAAATTAGATTGAGCTGGGGTGAACATCTATCAGG GAGAATGACGGTATTGCTCTCTAGCTTGTTGCCCGGACAGAATAGAAACA AGCCAGCATAGTGCCTACAAACATACATGCACACGACAGCTAATCCCGGA CCCTCGTGACATGATAATGTGACATAATTATCGCTAGCCCCCTTACACAC CTATTTATATATATATGTGTGTATTTCATGCGGACATTTGATGTAAAACC CATAGTCATGGATGATGAATGATGAATGATGAATGATGACTAAATATACT CATGGATAAAGTGACAATAAAAGAAAAGAAAAAAGAAAAAGACGATGTGG CGTCTTTTTCTACCAAAGTTTAATGATGCGCCCGTTCCCTCACTCCCACT TCCTTGACGATAATGATTATTTGTTCATCGTTCGGCCGCCACCGCCACCA CCTTGCTTTTGTTCTTTTGCGTCTCTTTTTTCTTGCCGTGGTGGCGCAGA CGTCATTGGTGGCTCGGCCGCCGATATCGTTCGACCTGTGCAAAGACCGA CTCTACCAGCGCCTGAACCACCACGGCATCGAGGTCACCAAGGTGCTGGA CGAGGAGCTCTGCTACATTCCCATGGGCGGAGCATTGCCCAAGCTGAATC AGGTCAGTCAGTAGGCTGTCAGGCTGTCAGGCTCTGTGTAGCCGCAGGCA GGCAGGCAGGCAGGCAGGCAATCAGCCCTACCGCATTGTTTTTTTTTAGC CCTGAAATAACAAAGAGGTTCGACTGTTGCCCCGAATTGAATCGTCTACT TTACACTATTTCTTCGTACCCTCTCTTTTCTTTCGTGTTACTCAAGTCGT ATTATTGTTTAGCCTTAACTATTGTTATTTACCCAGGTAGGGATGGGAAA CTGTATCACTCTCTCCCAAATCATGATAATGGGGTAGTAGGGCTATAGAT CGTCATAGACTTGGAAGAATTCGTCAAACATGGAAGTGGTAACGTCCTGT TGAATCGGAAAAGGCGCCAGCAAGTTGTAACCGAACGCGGTTGTGCAGAG AGGTCTGGTTTGTTTGGACGACATTCGACTAAGTGATAACCCTGAGTAAA ATATGAAAAGTGATTGGAAGATGACAAATAAAAGACGGCCTCTGGCTCGA ATAGGGAGCAGTAAAGTTTCACACTGAGGGTTTGCAGTACTGTCTGTATG TATCAGACAGCCAAGAATATTGTGTTGTCTCCATTTTTTTTTTTTTAAGG TAATTTTATTATTATTATTATTATTATTATTATTATTATTATTATCATTT TGTTTTGATTTTGATTTTGGCATTGTAAATTCTCTCGGGGAAAAAAGGCT TGGGTAGGTCAAAACGTTTTCTTGCTTTTTTTTTTTTTTCTCTCGTATTC CCGAGATGTATACGGTGCTTGGTACTATTTATCCTTTGCCTAGACAGACA AAATAAATATTTCACCCCCTGGACAAATACGAATACTTGCAAATGGTTTC CCAAAAAATTGGAAGTATTCGCCTGAGTTTCAGAATAAGCTCGTGTTATA CATGTGTCCCGGATCATCCACGATTTCTAACAATACTAGTAAATCGAATT GACAGGGATGTTTTTTTTTATTATTATTTGCCCGCTCCATCTGAACCTCA GGCGAATACGTTTTTTTTTAAAACGATTTGCCAAGTGTTCGGATTTGTCC GGGGGGTGAAATATTTAGTTCCTCGTTATTTTTTTATGTTAGGGTTAGGG TTGGATATCAAGGATATCAAGGTTGAAAAAAATCAAACCTGAGTAGAGCT GATAATATCATTCTCGTTTTATCTTGTTGTCTCGTCCTCCCATCTCCTTG CTTCTGCCTGTTTGTTTTTGTTTTGTTTTGCTTTAATCGGCATGCTGTAG CGTGTTGTTGCTTTCGGCGGAGCGTCAGGGCTTGTTCACGCGGCAACGGC ATACATGCATGTAAGTAGCAAGAGATGTAAAAAAACGAGTCTTGTGCAAA CACCGAACTTGACACCGTGTTAGAGAAGAAGATCAAGAGTAGGATTGATT TGCGTGAGTATAGTAGCCAGCTCTCCTCGAGAGACTGTTTGGCCGTTAGA GCTCTCTCTCTCTCTCTCTCCGTATTTCTTTGCTTGTTTTTCCAGACCAT AAACTGTGCCATCGAAGCCCCGCTCTGCTCTCGCTTACCACCCTACCAGT AATAAACATTTTTTTATTTAATTTTTTTACAATAATAATATCCCAAAACA TTTCTTTTCCACTTTTTTACCAAAATGAAAATAATTTAGGTGCGCATGTT GGCTGCCTCCACCGGCGTCGCCACCGCGATCGCGTCCGAGCTCAACAAAG GAGGTTCCGGCGCGCCTGAAGCGGCTGCTCGCCGAGCCTACCAGGCTCTG TGGCCCGCTAACGCGAAGCTGCAGCGCGATTTCCACGTGTTCGGCGGGGA ATTTTTGATGGCCCAGGAGGCCACGATACTGCGAGGGTTTTTCAACGGGT TCTTCAAGCTCCCATTGCCGTTGTGGGCAGTGAGTCAAAGTAGTTCTTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig17284:1095..5344+

>mRNA_H-paniculata_contig17284.4053.1 ID=mRNA_H-paniculata_contig17284.4053.1|Name=mRNA_H-paniculata_contig17284.4053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1680bp|location=Sequence derived from alignment at H-paniculata_contig17284:1095..5344+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACCCACAACCGAACAACAGCTGAAACATACCGCGGAAGGCAGCACGGT
CAGCCTGGAGGATGGCACATCGCTCACCTGCCGGCTCATACTGGACTGCA
GCGGCCACTACTCAGAGCTCGTGGAAAAAGACGGCCCGCACAACCCTGGG
GTGCAGATCGCCTACGGAGCAGAGGTGGAAGTTAAGGGGACCCACAACCG
AACAACAGCTGAAACATACCGCGGAAGGCAGCACGGTCAGCCTGGAGGAT
GGCACATCGCTCACCTGCCGGCTCATACTGGACTGCAGCGGCCACTACTC
AGAGCTCGTGGAAAAAGACGGCCCGCACAACCCTGGGGTGCAGATCGCCT
ACGGAGCAGAGGTGGAAGTTAAGGATGGGCACGCACCTTACGACGAGAAC
GCCATGCTGTTCATGGACTACCGTACGGATTACGTGAAAGAAGGCGAGCT
ATCGGCGAAGGAGCTGAAGGAACTGATCGACATCCCGACCTTCTTGTACG
CCATGCCCATGGGCAAAGCCGCCAACGGTCGTTCCAAGATCTTCTTTGAA
GAGATGGGCACGCACCTTACGACGAGAACGCCATGCTGTTCATGGACTAC
CGTACGGATTACGTGAAAGAAGGCGAGCTATCGGCGAAGGAGCTGAAGGA
ACTGATCGACATCCCGACCTTCTTGTACGCCATGCCCATGGGCAAAGCCG
CCAACGGTCGTTCCAAGATCTTCTTTGAAGAGACGTCATTGGTGGCTCGG
CCGCCGATATCGTTCGACCTGTGCAAAGACCGACTCTACCAGCGCCTGAA
CCACCACGGCATCGAGGTCACCAAGGTGCTGGACGAGGAGCTCTGCTACA
TTCCCATGGGCGGAGCATTGCCCAAGCTGAATCAGACGTCATTGGTGGCT
CGGCCGCCGATATCGTTCGACCTGTGCAAAGACCGACTCTACCAGCGCCT
GAACCACCACGGCATCGAGGTCACCAAGGTGCTGGACGAGGAGCTCTGCT
ACATTCCCATGGGCGGAGCATTGCCCAAGCTGAATCAGCGTGTTGTTGCT
TTCGGCGGAGCGTCAGGGCTTGTTCACGCGGCAACGGCATACATGCATCG
TGTTGTTGCTTTCGGCGGAGCGTCAGGGCTTGTTCACGCGGCAACGGCAT
ACATGCATGTGCGCATGTTGGCTGCCTCCACCGGCGTCGCCACCGCGATC
GCGTCCGAGCTCAACAAAGGAGGTTCCGGCGCGCCTGAAGCGGCTGCTCG
CCGAGCCTACCAGGCTCTGTGGCCCGCTAACGCGAAGCTGCAGCGCGATT
TCCACGTGTTCGGCGGGGAATTTTTGATGGCCCAGGAGGCCACGATACTG
CGAGGGTTTTTCAACGGGTTCTTCAAGCTCCCATTGCCGTTGTGGGCAGT
GAGTCAAAGTAGTTCTTAAGTGCGCATGTTGGCTGCCTCCACCGGCGTCG
CCACCGCGATCGCGTCCGAGCTCAACAAAGGAGGTTCCGGCGCGCCTGAA
GCGGCTGCTCGCCGAGCCTACCAGGCTCTGTGGCCCGCTAACGCGAAGCT
GCAGCGCGATTTCCACGTGTTCGGCGGGGAATTTTTGATGGCCCAGGAGG
CCACGATACTGCGAGGGTTTTTCAACGGGTTCTTCAAGCTCCCATTGCCG
TTGTGGGCAGTGAGTCAAAGTAGTTCTTAA
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