|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 642 |
| Cds size | 642 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17271.4048.1 >prot_H-paniculata_contig17271.4048.1 ID=prot_H-paniculata_contig17271.4048.1|Name=mRNA_H-paniculata_contig17271.4048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp
QVGEQSKALSLLTEMRRIGLQRSGVSYLTAISACSRVGDWERALSLLDEM
RTDGIEPDLKCYSAAISACGHGMQWNEAVSLLTDMRARGIIPNEFCYNAA
ISACGKSSRWKHAIELMKEMESGKLGVWPDMITYNAVIDACGKSGRWRES
LEILQDMRARADEPSVRGSDAPPPPIPDATTYGTAITACSKGKQWKIALM
LLEDMQAQVREPN* back to topmRNA from alignment at H-paniculata_contig17271:123..5284- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig17271.4048.1 ID=mRNA_H-paniculata_contig17271.4048.1|Name=mRNA_H-paniculata_contig17271.4048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5162bp|location=Sequence derived from alignment at H-paniculata_contig17271:123..5284- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTTGGAGAGCAGTCAAAGGCGCTTTCCTTGCTGACGGAGATGCGCAG
GATTGGGCTCCAGCGCTCGGGCGTATCTTACCTGACCGCCATCTCGGCCT
GCTCCCGGGTGGGTGATTGGGAGCGAGCTCTGAGCTTGTTGGATGAGATG
AGGACAGACGGTATCGAGCCAGACCTCAAGTGAGAACATGATGTACTGTA
TCGCACTGTATCGCACTGTATTGTACAGTAGTTTACAGAGGACGGCATTT
TGGACTTATCACCAGGGGTATCGGTTCTGGGGTCGAGGGTATACTCCGTA
CCGATCATGATTACGATAACTGAAACCGACTGTAACACATGCAAAATAGC
ATTGTCTGTAACAAATTTCGTATCGTCATAAGGAGGTGGTCTACTCCAGC
ACGGTACAGTTTTAATACTCTCCTATCAGTATGCCGTATAAGCCCACTCG
AAATACATACAACTCGAAGAAGTCAGCAGTGACAATTTCACTCCTCGGAT
GAAGGCCATTAATCGACGCGATTTTTGGAACATGACTTATGCCAGTATGA
TAAAATTTGGCACTTTTACAGACCTGTTGGAATTGATAACTGAGGGTTCT
TCATGCGTTCGTCAAGTGTTCGGTTGTCGAGTATAAGCGCACCTATGTAG
ATATTCCTGCTTTGGAGTATGACCGTTGGCTAAAAAGCACCTCTGGACAT
ACTCCTATTTTGGAGAATAACGGTTGGCCAAAAGTTGAAGGTTCCGTGAA
GGTGTTTTTACTTGAAAATAAACGGTCTTCATCCAACCCGAGTGCACATA
GTTTCAAGAAAAAGGCGAGCGTGGAAGTGGGCTGCAGCATGAAAAGGAGT
GAACGAGAGTGCTCCCTTCATGTTGACTTGGATAGCATAGTAAGCGCAGC
CGCCCTGAATCTGAAATTTCATCTTCAGTGGGTGGGTTGGTCGGTAGTCT
GGTGTACTCTACTGTCAACAGCGGACAACGATATCTTCGGTCTAATGTGT
CTTTTTCGTTTTGGGTCGGAATTTACCAAACAGTTCGTTTGATAACGTGC
TGTGGGGCATGTACTGTCAGTAAATACAGGATTTTGGTTTTTATTCTTGG
AAGCAGAACTGCCGGTGTAGATGACGGTGCTGACGCGATGAGTCAAGTCA
TGAGGCGCCGTGTCGCTGTGGGAGCAAGGTGTTCTAGGTACTCAACAGTA
TACCAGTACATACCCAACGTAGTTTGTCTTCATTCCGTCTATCAGTCTTG
TTGGAAGATTGCAAGGAGATGAGGAGGTAGGGTAGGGTACATGGGAATAT
ATCCATAAATTTCGGAGCCATTTTCCAACAAGCCCATTATGTGTGTGAAG
TCGAGTCTAGAAACGGGCAGTATACTGGTTCTGGTTCTGTTATGGTTGTG
ACGACTTTTGAGAACTCAAGCATGTTCTTGTCTTCGGATATGATCAGGTG
TTATAGCGCTGCTATTTCTGCCTGCGGACATGGGATGCAATGGAATGAGG
CTGTAAGCCTTTTGACGGACATGCGTGCTCGTGGAATTATTCCGAATGAG
GTGGGTTATGCTGAAATAATGCCTATGAGAAAGGGGGGATAAATCGCGAA
GCTTTTTTTTTTTTTTTTTCATGTTTTCAGCTTTTTTTGCAAGCGGCTTG
GTGGAAGGATCTCCTTCCCCGGTAAAAAAAACCTGTAGGGACGCGTGAAC
GCAATCCATTGAACGCATTCGAAGATCGTTGGGTTTTAGTATTTTATCGA
CTTGCTCTGCGAGGAGGCCTTTCGTTGAATAAGTGGCTCAAAACACCCTC
CCATACTCTGCTCAAGGTACATTATTATTATTTACATTACACTAAATTGT
ACGGGAAAATCGCTCGTTATCGCACCACCACCCACCGAGGTGCAAATATT
TTTCCATCAACGATTGTCTGGTGAATGGAGATCTTACGGAGTCGAAAGAG
CTCGTCAATCGAGATACTGTAGGTCCCGGCTAATTCTTTCCGATGACAGA
CATACGTTTCGATGGCAGTACTGTAGGGTGTCGAGATGAATGGGTATTGA
TTAGTGTTCATGCCCACCATAATATGACGTTCTGGTGTTTCCTGACGTCT
GCTTTTGCTTCTGGGAACTTTTGTCCTCTTACCGCGGGTCTGAGAAACTG
AACTAAAGTGCAAGGAGGAAGAAAAACATGAAATATGATTCTGGGCGATA
GTTTCAAGCTTTTTTCACACATAAATGCGATGAAGGTCGTCGGGGACATT
GGACCATGACCATGTCAACGTGATGATACTTGACTTGACCTCTTTCAGAA
CCCGGTGAAGGGATTAATACTGCACGCAACATGGATACTTGTGGAGTGTG
CCCGAGTTGTTGGAGTACGAACGCACGCAGCTATTCCGACAAAAGTTTAT
ACTTTATAAAGATGATATAATTGTGACATGTTGAAGCATGGCTATTCATA
AAGGTTGAAGATTTTACGGATGGAAGGCGTTTCTACTTAACTTGCAGAAA
AAACAAAAATCAGAATTTCTTTAAAAAAGAAAAAAATTAGTAGTGTTCAT
TCTACTCTCAAGCTGTGCCACACGGAACGCCTCGCCTAGATATGTCATTA
GATTGAGTGTTCTTGAACCATGTAGGCCTTGCCTGTCTTTCTCGCTCTTG
CTTTTCCCAGATACTTGATTTTGAAAGACAGTCATTGGTCCAGGTACTAT
TCAGTGTGATGTACTAGTGCCATGTACACTATTCACCCTCCGGACAGATG
CGAATACATTGGGTGTCCCGATATAGTGTTGTGGTGTGTCACGCGAGCTC
GACGGCAGTATATCGGGACCCCCGTTGTATTATGTCCCGTATGCACCTGA
AGGTCCAGCATGAATAAGCACGTGTATTCTATGTGCCCTGAACTATCTTG
TTTGACTGCGGCGAATACTTGAGTAGTAGCTTGTGCCCGCACATGCTGAA
ACACACATGACTTTGATCAATTCTTTCGTCTAAACCAATCGAACTAGTTG
TTTTTTCTTCGGGGATGGGGTGGGGGGGGGTGGGGCATGAGACTTCTGTA
CCCATGAAGTCTTTTCAAGTGATGTGTACAGGCCTCGGGTGAATTGCGAT
GATTTGGCCGCGCTACACGCTTGGCCGTGGGGAGGTAGGTACACTGTACG
ATTTTTTTTGTAGGATTCGAAAATTTAGTATATTTATTCACAAGTAGTAA
CCTGCTATCTTGAACAAACGACCCCTCACGGGGATGATCACTAAATAGTT
CCCTTGATACCTTGCCTGTGGTTTTTATTTTGACCACGAAAGTTTTGCTA
CAATGCCGCCATATCAGCCTGCGGGAAGAGCTCAAGGTGGAAGCACGCGA
TAGAGCTCATGAAGGAAATGGAGTCCGGCAAACTGGGCGTCTGGCCAGAC
ATGATCACGTACAACGCCGTCATCGATGCGTGCGGCAAGAGTGGAAGGTG
ACTATACTTTATGACCATGCGCCCTGTGGTCCAAGTGTTGAGACTCACAC
CTCATCACGTTGGTGGGGTTATTAGGTTCAATTCATTGGAACACACAATT
GTCAAAATGCTGCTAAAAACGTACTAAATACGAGCAGGTTGGCGCGTACG
TGATAAAAAGAATAGTGGTCATCTTCCAGAGTAACGTCAATTCCAACGTT
GACGAGTAAGCAGGGGACTACTGCTCCCACCGCGCGATAATTAATTCAAA
GCAACGACCAAGGTATTACAATTTCAGCCTCTTGATCGATGGGTTTCCCT
CCTCGACCAACAACAAAAAACATGAAATATAATGGAATGAGATAAAACGA
GAGCACCACTGTGGAGTACAACGTACTGGTACACCTCGTGTTGGCAGTGC
GTAATGCACCGTAGGGAATCAACTCCGGAGGAGTAGACACGGTAAACACA
CGCTACTTGCCCCAACACATCTCCTCGAACTGCATGTCTATACCGTTCTC
AAGTGTTTGCGGTGATGCGTGGGACTAGGACGTGAAGCCACTTGTATTGC
CACAGTGTTTTTTCCCTGGTATTACCGTCCCTAGTTACTATCAAATGAAG
AATAATATTGTAGTGGTCGAGAGCACATTCGTGCCGCTCCTGAACCTTGG
CCATCTACTGGACAATGACTGGTATTTTGTCCCTTTCTCGAAAAAGCTTT
TCTAGTGGTGTCCGACCCTGGATAATGACCATTTCATGTACAACAAAACG
AAATCCAAGTGCGTGGTCCGCACCATCCCAAGGCTCGAAAACCACCTGCC
GAGCAGGCGGTGCTCCCTCGAGAGCTAGTCCTTCCTCGGGGCGTCGTATT
CTCATGGTGGCTCAACTAGTAGGTGTAGCAATATCGCTGACATTCGTCGA
TGCATGTGGCAAGAGCGGCAGGGGTGTGGAAGATGACTATACAGTGCCGG
TCCACCCACAAGAAACAGTTGTGGGACACGTTGCACTTGAGAATTGAAAA
GTATCGGAAGGAACTTGCCGTAAGGAAACCAAGTTCAAATTTGTTGCCCC
CAGTGTATCGCCTATACGACTGCCCGGTTCCTTGCTTTACGGAAGCCAGA
AACGCAGTCTGAGAGTACTTGATTATTTGAGTTTCTCACGAGTCGACCGG
AACTGTATACCGTCGCTTTACTAAAAGGTCGGAAGTTACCCCCTCGTGCG
TGGTGGCAATGTGTTAGAAGCGCCCACGGCAATGTCATTTTATGCTGCCT
TGGAGGTTCGGTAGCTGGTCCCTTTACCTCCGAGAACGCCGACTGTACAC
AGTCTCACATGGAGGATTTTTCGGCTCGATTGGTTATACATTCGTATAAA
ATAATTGTATCTACGTTCCTTCTATTTTCTTTGGTGTATCCGATTGTGTT
TTCATCCGAACAGCGAGGGCAAAACATTGAGCCTCGCTTTTTTCACCAAA
CTTGACTCCTCTCGCACTTTTTACCGTGCTATTTCGCCACTAATTTATAC
ACGGTAGGTGGAGAGAGAGCTTGGAGATTTTGCAAGACATGCGCGCACGA
GCTGATGAACCCTCTGTCAGAGGCTCGGACGCGCCCCCCCCCCCCATCCC
CGACGCAACCACGTATGGAACGGCTATCACAGCTTGTAGCAAGGGCAAGC
AATGGAAGATTGCGCTCATGCTGTTGGAGGACATGCAAGCGCAGGTGCGT
GAACCTAATTGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig17271:123..5284- >mRNA_H-paniculata_contig17271.4048.1 ID=mRNA_H-paniculata_contig17271.4048.1|Name=mRNA_H-paniculata_contig17271.4048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at H-paniculata_contig17271:123..5284- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTTGGAGAGCAGTCAAAGGCGCTTTCCTTGCTGACGGAGATGCGCAG
GATTGGGCTCCAGCGCTCGGGCGTATCTTACCTGACCGCCATCTCGGCCT
GCTCCCGGGTGGGTGATTGGGAGCGAGCTCTGAGCTTGTTGGATGAGATG
AGGACAGACGGTATCGAGCCAGACCTCAACAGGTTGGAGAGCAGTCAAAG
GCGCTTTCCTTGCTGACGGAGATGCGCAGGATTGGGCTCCAGCGCTCGGG
CGTATCTTACCTGACCGCCATCTCGGCCTGCTCCCGGGTGGGTGATTGGG
AGCGAGCTCTGAGCTTGTTGGATGAGATGAGGACAGACGGTATCGAGCCA
GACCTCAAGTGTTATAGCGCTGCTATTTCTGCCTGCGGACATGGGATGCA
ATGGAATGAGGCTGTAAGCCTTTTGACGGACATGCGTGCTCGTGGAATTA
TTCCGAATGAGGTGTTATAGCGCTGCTATTTCTGCCTGCGGACATGGGAT
GCAATGGAATGAGGCTGTAAGCCTTTTGACGGACATGCGTGCTCGTGGAA
TTATTCCGAATGAGTTTTGCTACAATGCCGCCATATCAGCCTGCGGGAAG
AGCTCAAGGTGGAAGCACGCGATAGAGCTCATGAAGGAAATGGAGTCCGG
CAAACTGGGCGTCTGGCCAGACATGATCACGTACAACGCCGTCATCGATG
CGTGCGGCAAGAGTGGAAGTTTTGCTACAATGCCGCCATATCAGCCTGCG
GGAAGAGCTCAAGGTGGAAGCACGCGATAGAGCTCATGAAGGAAATGGAG
TCCGGCAAACTGGGCGTCTGGCCAGACATGATCACGTACAACGCCGTCAT
CGATGCGTGCGGCAAGAGTGGAAGGTGGAGAGAGAGCTTGGAGATTTTGC
AAGACATGCGCGCACGAGCTGATGAACCCTCTGTCAGAGGCTCGGACGCG
CCCCCCCCCCCCATCCCCGACGCAACCACGTATGGAACGGCTATCACAGC
TTGTAGCAAGGGCAAGCAATGGAAGATTGCGCTCATGCTGTTGGAGGACA
TGCAAGCGCAGGTGCGTGAACCTAATTGAGTGGAGAGAGAGCTTGGAGAT
TTTGCAAGACATGCGCGCACGAGCTGATGAACCCTCTGTCAGAGGCTCGG
ACGCGCCCCCCCCCCCCATCCCCGACGCAACCACGTATGGAACGGCTATC
ACAGCTTGTAGCAAGGGCAAGCAATGGAAGATTGCGCTCATGCTGTTGGA
GGACATGCAAGCGCAGGTGCGTGAACCTAATTGA back to top
|