prot_H-paniculata_contig1727.4046.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1727.4046.1
Unique Nameprot_H-paniculata_contig1727.4046.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length76
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1727.4046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 18..47
e-value: 0.0076
score: 25.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 18..50
score: 10.793
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..74
e-value: 7.0E-13
score: 50.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 7..70
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 9..70
e-value: 2.6E-8
score: 34.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 18..75
score: 16.733
IPR039323Ankyrin repeat domain-containing protein 60PANTHERPTHR22677FAMILY NOT NAMEDcoord: 21..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1727contigH-paniculata_contig1727:15961..16486 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1727.4046.1mRNA_H-paniculata_contig1727.4046.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1727 15961..16486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1727.4046.1 ID=prot_H-paniculata_contig1727.4046.1|Name=mRNA_H-paniculata_contig1727.4046.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
HKQGFHRRGCRIDTTRPFGNSPLYLAATRGSHDAVMKLLKYGASIGDREP
VSGETALHGAAAQGRVQAVQVSLGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR039323ANKRD60