prot_H-paniculata_contig17252.4040.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17252.4040.1
Unique Nameprot_H-paniculata_contig17252.4040.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length128
Homology
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.980e-24
Identity = 61/127 (48.03%), Postives = 79/127 (62.20%), Query Frame = 0
Query:    2 SERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKT-PSPP 115
            +ER GR ++ +VRCM ADS LP  L  ELM T  + S R PH A+  G  +              V+GA AF+H ET  KKL+ ++ EGR+VGYS +SKS R+ N  TRR+ ESRNV FI+T P+PP
Sbjct:  737 NERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPAPP 863          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.980e-24
Identity = 61/127 (48.03%), Postives = 79/127 (62.20%), Query Frame = 0
Query:    2 SERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKT-PSPP 115
            +ER GR ++ +VRCM ADS LP  L  ELM T  + S R PH A+  G  +              V+GA AF+H ET  KKL+ ++ EGR+VGYS +SKS R+ N  TRR+ ESRNV FI+T P+PP
Sbjct:  643 NERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETNPAPP 769          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 3.050e-24
Identity = 61/127 (48.03%), Postives = 79/127 (62.20%), Query Frame = 0
Query:    2 SERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKT-PSPP 115
            +ER GR ++ +VRCM ADS LP  L  ELM T  + S R PH A+  G  +              V+GA AF+H ET  KKL+ ++ EGR+VGYS +SKS R+ N  TRR+ ESRNV FI+T P+PP
Sbjct:  966 NERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPAPP 1092          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 8.840e-23
Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 0
Query:    2 SERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKTP 112
            +ER GR ++ +VRC+ ADS LP FL  EL+ T  + S R PH A+  G  +              VIG+ AF+H ET  +KLE ++ EGR+VGYS +SKS R+ N  TRR+  SRNV FI+TP
Sbjct:  207 NERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRNVVFIETP 329          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 3.150e-22
Identity = 58/123 (47.15%), Postives = 75/123 (60.98%), Query Frame = 0
Query:    2 SERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKTP 112
            +ER GR L+ +VRC+ ADS LP FL  EL+ T  + S R PH A+  G  +              VIG+ AF+H ET  +KLE ++ EGR+VGYS +SKS R+ N  TRR+  SR V FIKTP
Sbjct:  676 NERAGRTLLNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHEALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRIVVFIKTP 798          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 7.870e-22
Identity = 58/127 (45.67%), Postives = 76/127 (59.84%), Query Frame = 0
Query:    2 SERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKT-PSPP 115
            +ER GR ++ +VRCM ADS LP  L  ELM T  + S R PH A+     +              V+GA AF+H ET  KKL+ ++ EGR+VGYS +SKS R+ N  T R+ ESRN  FI+T P+PP
Sbjct:  182 NERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNXXXYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRACEGRLVGYSLDSKSYRIYNAQTTRVRESRNDIFIETTPAPP 308          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5KMG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG0_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 6.690e-21
Identity = 57/116 (49.14%), Postives = 71/116 (61.21%), Query Frame = 0
Query:   13 VRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKT-PSPP 115
            VRCM ADS LP  L  +LM T  + S R PH A+  G  +              V+GA AF+H ET  KKL+ ++ EGR+VGYS +SKS R+ N  TRR+ ESRNV FI+T PSPP
Sbjct:    4 VRCMLADSTLPSLLWGKLMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHPRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPSPP 119          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 6.970e-21
Identity = 55/123 (44.72%), Postives = 73/123 (59.35%), Query Frame = 0
Query:    2 SERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKTP 112
            + R GR ++ +VRC+ ADS LP FL  EL+ T  + S R PH A+  G  +              VIG+ AF+H  T  +KLE ++ EGR+VGYS  SKS R+ N  TRR+  SRNV FI+TP
Sbjct:  758 NARAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEATHTRKLEHRAWEGRLVGYSTVSKSYRIYNSETRRVRVSRNVVFIETP 880          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5KB94_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB94_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.370e-18
Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = 0
Query:    2 SERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCGVIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKTP 112
            +ER GR ++ +VRC+ ADS LP FL  EL+ T  + S R PH A+  G T C  +        ET  +KLE ++ EGR+VGYS  SKS ++ N  TRR+  SRNV FI+TP
Sbjct:  580 NERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNG-TPCKEL-------YETHTRKLEYRAWEGRLVGYSMGSKSYQIYNSETRRVRVSRNVVFIETP 682          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5JRS9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS9_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.900e-18
Identity = 51/130 (39.23%), Postives = 74/130 (56.92%), Query Frame = 0
Query:    1 MSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIG-VGPTF-----------CGVIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKTPSPPFPP 118
            +S R G+ L  + RC+  D   P  L  ELM+T    S R+PH  +G V P F             VIGA +F++ E   KKL  ++ EG++ G+S +SK+ R+ NP T  ++ESRNV+FI+TP+   PP
Sbjct: 1087 VSGRDGQTLTTITRCLMEDGAFPPTLWGELMMTAVDLSNRSPHSVLGGVTPYFKMYGKEADLSRLRVIGARSFVNYERYTKKLSDRTFEGKLCGFSRDSKTYRIYNPATGNVVESRNVTFIETPAYSMPP 1216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJN3_9PHAE2.980e-2448.03Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JYB5_9PHAE2.980e-2448.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE3.050e-2448.03Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KL37_9PHAE8.840e-2346.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JIN1_9PHAE3.150e-2247.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE7.870e-2245.67Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KMG0_9PHAE6.690e-2149.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC75_9PHAE6.970e-2144.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB94_9PHAE1.370e-1846.85Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRS9_9PHAE1.900e-1839.23Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17252contigH-paniculata_contig17252:512..895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17252.4040.1mRNA_H-paniculata_contig17252.4040.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17252 402..1238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17252.4040.1 ID=prot_H-paniculata_contig17252.4040.1|Name=mRNA_H-paniculata_contig17252.4040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp
MSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGP
TFCGVIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRI
MESRNVSFIKTPSPPFPPQSGEVPMNL*
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