mRNA_H-paniculata_contig17252.4040.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17252.4040.1
Unique NamemRNA_H-paniculata_contig17252.4040.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5JWF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF9_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 5.760e-38
Identity = 78/160 (48.75%), Postives = 103/160 (64.38%), Query Frame = 3
Query:    6 GARSSKYVKKEFKDYCLQVGFSLEYASANTPHQIGMSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIG-VGP---TFCG--------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKTPS 449
            G + ++Y   EF++YCLQ+G  LEYAS NTP QIG +ER GR L AMVRC+  DSGLP+FL   LM T  + S R PH A+G + P    +C          IGA AF+H+ET  ++L+ K+ EG + GYS +SKS  + NP T  + ESRNV F++TPS
Sbjct:  334 GDKEAEYTCLEFREYCLQIGVKLEYASTNTPQQIGANERAGRTLAAMVRCLLTDSGLPKFLWGGLMQTAVYLSNRVPHAALGNITPYKALYCKDANLGHLRAIGARAFVHVETHTRELDPKAWEGCLCGYSMDSKSFHIYNPETGNVRESRNVIFVETPS 493          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 6.450e-37
Identity = 92/222 (41.44%), Postives = 125/222 (56.31%), Query Frame = 3
Query:   12 RSSKYVKKEFKDYCLQVGFSLEYASANTPHQIGMSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKT-PSPPFPPQSG--EVPMNL*GHGQAGKDQGHNYITDD-----SFLHILCGYNSVLDLLPGTSPDYT 617
            + +++    ++ YCL VG  L++AS NTPHQIG +ER GR ++ +VRCM ADS LP  L  ELM T  + S R PH A+  G  +              V+GA AF+H ET  KKL+ ++ EGR+VGYS +SKS R+ N  TRR+ ESRNV FI+T P+PP   + G  +       H    +D   NY T+      S  H + G  SVL+L+  T P  T
Sbjct:  932 KGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPAPPSLDERGFDDGEFTYADHDDMIRDV-RNYTTNHPVDALSPTHAV-GDPSVLELIEDTPPSTT 1151          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 5.130e-36
Identity = 91/218 (41.74%), Postives = 123/218 (56.42%), Query Frame = 3
Query:   12 RSSKYVKKEFKDYCLQVGFSLEYASANTPHQIGMSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKT-PSPPFPPQSG--EVPMNL*GHGQAGKDQGHNYITDDSF-----LHILCGYNSVLDLLPGTS 605
            + +++    ++ YCL VG  L++AS NTPHQIG +ER GR ++ +VRCM ADS LP  L  ELM T  + S R PH A+  G  +              V+GA AF+H ET  KKL+ ++ EGR+VGYS +SKS R+ N  TRR+ ESRNV FI+T P+PP   + G  +       H    +D   NY T+ S       H + G  SVL+LL   S
Sbjct:  703 KGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPAPPSLDERGFDDGEFTYADHDDMIRDV-RNYTTNHSVDALSPTHAV-GDPSVLELLEDIS 918          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 5.150e-36
Identity = 91/218 (41.74%), Postives = 123/218 (56.42%), Query Frame = 3
Query:   12 RSSKYVKKEFKDYCLQVGFSLEYASANTPHQIGMSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKT-PSPPFPPQSG--EVPMNL*GHGQAGKDQGHNYITDDSF-----LHILCGYNSVLDLLPGTS 605
            + +++    ++ YCL VG  L++AS NTPHQIG +ER GR ++ +VRCM ADS LP  L  ELM T  + S R PH A+  G  +              V+GA AF+H ET  KKL+ ++ EGR+VGYS +SKS R+ N  TRR+ ESRNV FI+T P+PP   + G  +       H    +D   NY T+ S       H + G  SVL+LL   S
Sbjct:  609 KGAEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETNPAPPSLDERGFDDGEFTYADHDDMIRDV-RNYTTNHSVDALSPTHAV-GDPSVLELLEDIS 824          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 5.270e-35
Identity = 87/221 (39.37%), Postives = 119/221 (53.85%), Query Frame = 3
Query:    6 GARSSKYVKKEFKDYCLQVGFSLEYASANTPHQIGMSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKTPSPPFPPQSGEVPMNL*GHGQAGKDQGHNYITDDSFLHILCGY--NSVLDLLPGTSPDYTTMD 626
            G + +++   EF+ YC  +G  LE+AS N P QIG +ER GR ++ +VRC+ ADS LP FL  EL+ T  + S R PH A+  G  +              VIG+ AF+H ET  +KLE ++ EGR+VGYS +SKS R+ N  TRR+  SRNV FI+TP  P  P   E   +         D+   Y T D  +  +  Y  N  +D LP   PD+   D
Sbjct:  171 GDQGTEFTSAEFRQYCQDIGIKLEFASPNIPQQIGANERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRNVVFIETP--PVAPALDEFGFD---------DREFTYDTHDDMVRDVRNYTFNHSIDSLP---PDHDVGD 377          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 3.100e-33
Identity = 73/161 (45.34%), Postives = 99/161 (61.49%), Query Frame = 3
Query:   12 RSSKYVKKEFKDYCLQVGFSLEYASANTPHQIGMSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKT-PSPP 455
            + +++    ++ YCL VG  L++AS NTPHQIG +ER GR ++ +VRCM ADS LP  L  ELM T  + S R PH A+     +              V+GA AF+H ET  KKL+ ++ EGR+VGYS +SKS R+ N  T R+ ESRN  FI+T P+PP
Sbjct:  148 KGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNXXXYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRACEGRLVGYSLDSKSYRIYNAQTTRVRESRNDIFIETTPAPP 308          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 3.090e-29
Identity = 70/166 (42.17%), Postives = 95/166 (57.23%), Query Frame = 3
Query:    6 GARSSKYVKKEFKDYC-------LQVGFSLEYASANTPHQIGMSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKTP 446
            G + +++   EF+ YC         +   LE+AS NTP QIG + R GR ++ +VRC+ ADS LP FL  EL+ T  + S R PH A+  G  +              VIG+ AF+H  T  +KLE ++ EGR+VGYS  SKS R+ N  TRR+  SRNV FI+TP
Sbjct:  715 GDQGTEFTSAEFRQYCQNISIKLXNISIKLEFASPNTPQQIGANARAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEATHTRKLEHRAWEGRLVGYSTVSKSYRIYNSETRRVRVSRNVVFIETP 880          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5KC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC00_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 3.100e-29
Identity = 65/149 (43.62%), Postives = 91/149 (61.07%), Query Frame = 3
Query:    6 GARSSKYVKKEFKDYCLQVGFSLEYASANTPHQIGMSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCG------------VIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIME 416
            G + +++   EF+ YC  +G  LE+AS NTP QIG +ER GR ++ +VRC+ ADS LP FL  EL+ T  + S R PH A+  G  +              VIG+ AF+H ET  +KLE ++ EGR+VGYS +SKS R+ N  TRR+ +
Sbjct:  596 GDQGTEFTSAEFRQYCQDIGIKLEFASPNTPQQIGANERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRD 744          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5JRS9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS9_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 4.350e-27
Identity = 65/163 (39.88%), Postives = 93/163 (57.06%), Query Frame = 3
Query:   12 RSSKYVKKEFKDYCLQVGFSLEYASANTPHQIGMSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIG-VGPTF-----------CGVIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKTPSPPFPP 464
            R  + V   F  YC+  G ++EYA+ NTP Q G+S R G+ L  + RC+  D   P  L  ELM+T    S R+PH  +G V P F             VIGA +F++ E   KKL  ++ EG++ G+S +SK+ R+ NP T  ++ESRNV+FI+TP+   PP
Sbjct: 1054 RGGENVANIFTAYCMDSGITIEYAATNTPQQNGVSGRDGQTLTTITRCLMEDGAFPPTLWGELMMTAVDLSNRSPHSVLGGVTPYFKMYGKEADLSRLRVIGARSFVNYERYTKKLSDRTFEGKLCGFSRDSKTYRIYNPATGNVVESRNVTFIETPAYSMPP 1216          
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Match: A0A6H5KB94_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB94_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 5.580e-27
Identity = 65/133 (48.87%), Postives = 84/133 (63.16%), Query Frame = 3
Query:   48 YCLQVGFSLEYASANTPHQIGMSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGPTFCGVIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRIMESRNVSFIKTP 446
            YC  +G  LE+AS NTP QIG +ER GR ++ +VRC+ ADS LP FL  EL+ T  + S R PH A+  G T C  +        ET  +KLE ++ EGR+VGYS  SKS ++ N  TRR+  SRNV FI+TP
Sbjct:  558 YCQDIGIKLEFASPNTPQQIGANERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNG-TPCKEL-------YETHTRKLEYRAWEGRLVGYSMGSKSYQIYNSETRRVRVSRNVVFIETP 682          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17252.4040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWF9_9PHAE5.760e-3848.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J842_9PHAE6.450e-3741.44Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJN3_9PHAE5.130e-3641.74Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JYB5_9PHAE5.150e-3641.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL37_9PHAE5.270e-3539.37Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNH5_9PHAE3.100e-3345.34Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JC75_9PHAE3.090e-2942.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC00_9PHAE3.100e-2943.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRS9_9PHAE4.350e-2739.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KB94_9PHAE5.580e-2748.87Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17252contigH-paniculata_contig17252:402..1238 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score64.7
Seed ortholog evalue3.6e-08
Seed eggNOG ortholog126957.SMAR005586-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.zinc finger
EggNOG OGs38DPC@33154,3BI7U@33208,3CTS1@33213,421YP@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
Exons1
Model size837
Cds size384
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17252.4040.1prot_H-paniculata_contig17252.4040.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17252 512..895 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929361.2419138-UTR-H-paniculata_contig17252:401..5111622929361.2419138-UTR-H-paniculata_contig17252:401..511Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17252 402..511 +
1691480830.3736155-UTR-H-paniculata_contig17252:401..5111691480830.3736155-UTR-H-paniculata_contig17252:401..511Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17252 402..511 +
1622929361.2799628-UTR-H-paniculata_contig17252:895..12381622929361.2799628-UTR-H-paniculata_contig17252:895..1238Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17252 896..1238 +
1691480830.3952608-UTR-H-paniculata_contig17252:895..12381691480830.3952608-UTR-H-paniculata_contig17252:895..1238Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17252 896..1238 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929361.2657416-CDS-H-paniculata_contig17252:511..8951622929361.2657416-CDS-H-paniculata_contig17252:511..895Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17252 512..895 +
1691480830.385681-CDS-H-paniculata_contig17252:511..8951691480830.385681-CDS-H-paniculata_contig17252:511..895Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17252 512..895 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17252.4040.1

>prot_H-paniculata_contig17252.4040.1 ID=prot_H-paniculata_contig17252.4040.1|Name=mRNA_H-paniculata_contig17252.4040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp
MSERVGRALVAMVRCMFADSGLPEFLGEELMLTVAFQSKRAPHFAIGVGP
TFCGVIGASAFLHIETCIKKLELKSIEGRVVGYSDNSKSDRVCNPVTRRI
MESRNVSFIKTPSPPFPPQSGEVPMNL*
back to top

mRNA from alignment at H-paniculata_contig17252:402..1238+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17252.4040.1 ID=mRNA_H-paniculata_contig17252.4040.1|Name=mRNA_H-paniculata_contig17252.4040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=837bp|location=Sequence derived from alignment at H-paniculata_contig17252:402..1238+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCCAGGTGCTCGGAGCTCGAAGTACGTCAAGAAGGAATTCAAGGACTAC TGTCTTCAGGTGGGGTTCTCGCTCGAGTACGCCAGCGCCAACACGCCGCA CCAAATTGGCATGTCCGAGCGCGTCGGAAGAGCGCTTGTGGCTATGGTTC GTTGCATGTTTGCCGACAGCGGACTGCCAGAGTTTCTCGGGGAAGAATTG ATGTTAACAGTCGCGTTTCAGAGCAAGAGGGCGCCGCACTTTGCGATCGG AGTCGGACCTACGTTTTGTGGAGTCATCGGTGCCAGTGCCTTTCTGCACA TCGAGACGTGCATCAAGAAGCTCGAACTGAAGTCAATTGAAGGACGGGTG GTGGGGTACAGCGACAACAGCAAGAGCGACCGCGTCTGCAATCCGGTCAC CCGGCGCATCATGGAAAGCAGGAACGTCAGCTTTATCAAAACGCCATCGC CCCCATTCCCGCCACAATCGGGAGAAGTCCCGATGAATTTGTGAGGGCAC GGACAGGCTGGCAAAGACCAAGGTCACAACTATATCACCGATGACAGTTT TTTGCACATTCTTTGCGGCTACAATTCGGTGCTGGATCTCCTCCCCGGCA CTTCCCCCGATTACACTACCATGGACGAGCTTTCAGCGAACCCGCAGGAG GGAGCTCTATGCGGGGGCGCGCCGCTGAGGGGCATTGTGGAAGGAGGCGT TCCACAGGAAGGAATTCTATCAGAGGGAGGACCGCCTTCTCCTGAGGAAG CGCCACAGGAGAACGTTCCGCAGGAGGGCGGTATCGAACCGCCGGAATAA CCAGTGTCGCCCGACGAACCTCCCTTGGAAGCACCGC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig17252:402..1238+

>mRNA_H-paniculata_contig17252.4040.1 ID=mRNA_H-paniculata_contig17252.4040.1|Name=mRNA_H-paniculata_contig17252.4040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=768bp|location=Sequence derived from alignment at H-paniculata_contig17252:402..1238+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCGAGCGCGTCGGAAGAGCGCTTGTGGCTATGGTTCGTTGCATGTT
TGCCGACAGCGGACTGCCAGAGTTTCTCGGGGAAGAATTGATGTTAACAG
TCGCGTTTCAGAGCAAGAGGGCGCCGCACTTTGCGATCGGAGTCGGACCT
ACGTTTTGTGGAGTCATCGGTGCCAGTGCCTTTCTGCACATCGAGACGTG
CATCAAGAAGCTCGAACTGAAGTCAATTGAAGGACGGGTGGTGGGGTACA
GCGACAACAGCAAGAGCGACCGCGTCTGCAATCCGGTCACCCGGCGCATC
ATGGAAAGCAGGAACGTCAGCTTTATCAAAACGCCATCGCCCCCATTCCC
GCCACAATCGGGAGAAGTCCCGATGAATTTGTGAATGTCCGAGCGCGTCG
GAAGAGCGCTTGTGGCTATGGTTCGTTGCATGTTTGCCGACAGCGGACTG
CCAGAGTTTCTCGGGGAAGAATTGATGTTAACAGTCGCGTTTCAGAGCAA
GAGGGCGCCGCACTTTGCGATCGGAGTCGGACCTACGTTTTGTGGAGTCA
TCGGTGCCAGTGCCTTTCTGCACATCGAGACGTGCATCAAGAAGCTCGAA
CTGAAGTCAATTGAAGGACGGGTGGTGGGGTACAGCGACAACAGCAAGAG
CGACCGCGTCTGCAATCCGGTCACCCGGCGCATCATGGAAAGCAGGAACG
TCAGCTTTATCAAAACGCCATCGCCCCCATTCCCGCCACAATCGGGAGAA
GTCCCGATGAATTTGTGA
back to top