mRNA_H-paniculata_contig10621.403.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10621.403.1
Unique NamemRNA_H-paniculata_contig10621.403.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Match: A0A6H5JBM1_9PHAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBM1_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.140e-15
Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = 1 
Query:    1 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFKCKEGIF 123
            VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNF  +   F
Sbjct: 1081 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPF 1121
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BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Match: D8LLV8_ECTSI (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV8_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.140e-15
Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = 1 
Query:    1 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFKCKEGIF 123
            VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNF  +   F
Sbjct: 1052 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPF 1092
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BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Match: D8LIN7_ECTSI (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN7_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 2.300e-13
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 1 
Query:    1 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFKCKEGIF 123
            +KDRHNGNILLD++GRVIH+DFGFMLANSPGGN   +   F
Sbjct: 1164 IKDRHNGNILLDSQGRVIHVDFGFMLANSPGGNLGFESAPF 1204
[Close]
BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Match: A0A6H5K515_9PHAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K515_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 2.300e-13
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 1 
Query:    1 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFKCKEGIF 123
            +KDRHNGNILLD++GRVIH+DFGFMLANSPGGN   +   F
Sbjct: 1156 IKDRHNGNILLDSQGRVIHVDFGFMLANSPGGNLGFESAPF 1196
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BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Match: X6M4N0_RETFI (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6M4N0_RETFI)

HSP 1 Score: 69.3 bits (168), Expect = 2.950e-13
Identity = 28/41 (68.29%), Postives = 35/41 (85.37%), Query Frame = 1 
Query:    1 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFKCKEGIF 123
            VKDRHNGN+L+D+ GRVIHIDFGF+++NSPGGNF  +   F
Sbjct:   68 VKDRHNGNVLIDSEGRVIHIDFGFIMSNSPGGNFGFESAPF 108
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BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Match: M2Y556_GALSU (Phosphatidylinositol 4-kinase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y556_GALSU)

HSP 1 Score: 69.7 bits (169), Expect = 8.030e-13
Identity = 27/41 (65.85%), Postives = 36/41 (87.80%), Query Frame = 1 
Query:    1 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFKCKEGIF 123
            +KDRHNGNIL+D+ G +IHIDFGF+L+NSPGGNF+ ++  F
Sbjct:  950 IKDRHNGNILIDSEGHIIHIDFGFLLSNSPGGNFEFEKSPF 990
[Close]
BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Match: X6NJQ3_RETFI (Phosphatidylinositol 4-kinase (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NJQ3_RETFI)

HSP 1 Score: 68.2 bits (165), Expect = 1.960e-12
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 1 
Query:    1 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFKCKEGIF 123
            VKDRHNGNIL+D  GR+IHIDFGF+++NSPGGNF  +   F
Sbjct:  235 VKDRHNGNILIDNEGRIIHIDFGFIMSNSPGGNFGFESAPF 275
[Close]
BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Match: A0A5K0WVC5_9MAGN (PI3K/PI4K catalytic domain-containing protein (Fragment) n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0WVC5_9MAGN)

HSP 1 Score: 63.2 bits (152), Expect = 2.710e-12
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 1 
Query:    1 VKDRHNGNILLDARGRVIHIDFGFMLANSPGG-NFK 105
            VKDRHNGN+LLD  G +IHIDFGFML+NSPGG NF+
Sbjct:    1 VKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFE 36
[Close]
BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Match: A0A7S2FYW1_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2FYW1_9DINO)

HSP 1 Score: 66.2 bits (160), Expect = 3.120e-12
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 1 
Query:    1 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFKCKEGIF 123
            VKDRHNGN+++D+ G V+H+DFGFML+NSPGGN   ++  F
Sbjct:   45 VKDRHNGNLMMDSSGHVVHVDFGFMLSNSPGGNMAFEQSPF 85
[Close]
BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Match: A0A7S3BX70_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BX70_9EUKA)

HSP 1 Score: 66.2 bits (160), Expect = 4.570e-12
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 1 
Query:    1 VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFKCKEGIF 123
            +KDRHNGNILL A G ++HIDFGFML NSPGGN   +   F
Sbjct:   70 IKDRHNGNILLHANGHIVHIDFGFMLTNSPGGNMNFESAPF 110
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10621.403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBM1_9PHAE1.140e-1585.37PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
D8LLV8_ECTSI1.140e-1585.37PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
D8LIN7_ECTSI2.300e-1373.17PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A6H5K515_9PHAE2.300e-1373.17PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
X6M4N0_RETFI2.950e-1368.29PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
M2Y556_GALSU8.030e-1365.85Phosphatidylinositol 4-kinase n=1 Tax=Galdieria su... [more]
X6NJQ3_RETFI1.960e-1268.29Phosphatidylinositol 4-kinase (Fragment) n=1 Tax=R... [more]
A0A5K0WVC5_9MAGN2.710e-1277.78PI3K/PI4K catalytic domain-containing protein (Fra... [more]
A0A7S2FYW1_9DINO3.120e-1260.98Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A7S3BX70_9EUKA4.570e-1265.85Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10621contigH-paniculata_contig10621:7658..7780 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score77.4
Seed ortholog evalue1.7e-12
Seed eggNOG ortholog2880.D8LLV8
Preferred namePI4KB
KEGG rclassRC00002,RC00078
KEGG koko:K19801
KEGG ReactionR03361
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
KEGG ModuleM00130
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000003,GO:0000139,GO:0000212,GO:0000226,GO:0000280,GO:0000910,GO:0000916,GO:0003674,GO:0003824,GO:0004430,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006810,GO:0006897,GO:0006898,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007051,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007423,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0010256,GO:0010259,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0023052,GO:0030029,GO:0030036,GO:0030258,GO:0030725,GO:0030726,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0033206,GO:0035295,GO:0035556,GO:0036213,GO:0042710,GO:0043062,GO:0043063,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043583,GO:0044010,GO:0044011,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0044837,GO:0045017,GO:0046474,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0048015,GO:0048017,GO:0048137,GO:0048232,GO:0048285,GO:0048471,GO:0048513,GO:0048609,GO:0048731,GO:0048839,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051301,GO:0051321,GO:0051703,GO:0051704,GO:0051716,GO:0052742,GO:0060872,GO:0061640,GO:0061982,GO:0061983,GO:0065007,GO:0071704,GO:0071840,GO:0071889,GO:0071944,GO:0090175,GO:0090407,GO:0090605,GO:0090609,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0140013,GO:1901576,GO:1903046,GO:1905330,GO:2000026,GO:2000027
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0903@2759
EC2.7.1.67
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size123
Cds size123
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928766.771963-CDS-H-paniculata_contig10621:7657..77801622928766.771963-CDS-H-paniculata_contig10621:7657..7780Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10621 7658..7780 +
1691480611.3065877-CDS-H-paniculata_contig10621:7657..77801691480611.3065877-CDS-H-paniculata_contig10621:7657..7780Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10621 7658..7780 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10621.403.1prot_H-paniculata_contig10621.403.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10621 7658..7780 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10621.403.1

>prot_H-paniculata_contig10621.403.1 ID=prot_H-paniculata_contig10621.403.1|Name=mRNA_H-paniculata_contig10621.403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=41bp
VKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFKCKEGIF
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mRNA from alignment at H-paniculata_contig10621:7658..7780+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10621.403.1 ID=mRNA_H-paniculata_contig10621.403.1|Name=mRNA_H-paniculata_contig10621.403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=123bp|location=Sequence derived from alignment at H-paniculata_contig10621:7658..7780+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGAAGGACCGGCATAATGGGAATATATTGTTGGACGCGCGAGGGCGCGT
GATCCACATCGACTTCGGTTTCATGCTTGCCAACAGCCCGGGGGGAAACT
TCAAATGTAAGGAGGGTATTTTT
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Coding sequence (CDS) from alignment at H-paniculata_contig10621:7658..7780+

>mRNA_H-paniculata_contig10621.403.1 ID=mRNA_H-paniculata_contig10621.403.1|Name=mRNA_H-paniculata_contig10621.403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=246bp|location=Sequence derived from alignment at H-paniculata_contig10621:7658..7780+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGAAGGACCGGCATAATGGGAATATATTGTTGGACGCGCGAGGGCGCGT
GATCCACATCGACTTCGGTTTCATGCTTGCCAACAGCCCGGGGGGAAACT
TCAAATGTAAGGAGGGTATTTTTGTGAAGGACCGGCATAATGGGAATATA
TTGTTGGACGCGCGAGGGCGCGTGATCCACATCGACTTCGGTTTCATGCT
TGCCAACAGCCCGGGGGGAAACTTCAAATGTAAGGAGGGTATTTTT
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