mRNA_H-paniculata_contig17224.4027.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17224.4027.1
Unique NamemRNA_H-paniculata_contig17224.4027.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Match: D7G4A7_ECTSI (Apyrase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4A7_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 2.760e-86
Identity = 123/177 (69.49%), Postives = 148/177 (83.62%), Query Frame = 1 
Query:    1 AMMTVDDRTGIVFEIVEDDDGRHMAPRYIIPEGDGTVDKGMKLEWATVKDGKLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAEAGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILIVDEDFRKVEVRHAGENIPTHGFSSFK 531
            +++TVDDRTGIVFEI+E+   RHMAPRYI+PEGDG +DKGMKLEWAT KDG LV+GS GKE+TD+ G I   NNNW+  ID HG +  +DWT++Y  LR + GA+FPGYMIHESAAWSD L KWVFLPRR+S E YDD++DE++GSNTILIVDEDFRKV+VRH G+ + THGFSSFK
Sbjct:  152 SLLTVDDRTGIVFEILEEQGERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPHGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMGSNTILIVDEDFRKVDVRHVGDIVETHGFSSFK 328
[Close]
BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Match: A0A835Z277_9STRA (Apyrase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z277_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.100e-65
Identity = 99/177 (55.93%), Postives = 131/177 (74.01%), Query Frame = 1 
Query:    4 MMTVDDRTGIVFEIVEDDDGR-HMAPRYIIPEGDGTVDKGMKLEWATVKDGKLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAEAGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILIVDEDFRKVEVRHAGENIPTHGFSSFK 531
            + T DDRTGIVFE++++  G  H+AP++++ EGDG+VDKGMK+EWATVKDG+LV GS GKE+T++ GA+   NNNWV L+D  G     DWT+ Y+ +R   G +FPGYMIHE+  W+  L +WVFLPRR+S + YDD +DE+ GSN +LI+DE   KVEVR  G  +P  GFSSFK
Sbjct:  151 LYTFDDRTGIVFEVIKESSGDYHVAPKHVLGEGDGSVDKGMKIEWATVKDGELVCGSFGKEYTNAAGAVISTNNNWVVLVDAEGRQRRYDWTQHYQTMREATGTTFPGYMIHEAGNWAPALRRWVFLPRRISPDPYDDAEDERKGSNKMLILDEALSKVEVREVGTIMPERGFSSFK 327
[Close]
BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Match: UPI000711D1E8 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711D1E8)

HSP 1 Score: 209 bits (532), Expect = 6.400e-64
Identity = 97/176 (55.11%), Postives = 123/176 (69.89%), Query Frame = 1 
Query:    4 MMTVDDRTGIVFEIVEDDDGRHMAPRYIIPEGDGTVDKGMKLEWATVKDGKLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAEAGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILIVDEDFRKVEVRHAGENIPTHGFSSFK 531
            + T DDRTG+ FEIV    G+   PRYI+ EGDG  DKG K EWATVKDGK+ +GS GKE+T+  G+I   NN W+ +ID +G V HEDWT+++ KLR   G  +PGYMIHE+  WS V  +WV LPRR+S EAYD+ +DE+ GSNT++   EDF K+EV+H     PT GFS FK
Sbjct:  128 LFTFDDRTGLAFEIV----GKKAIPRYIMMEGDGNTDKGQKTEWATVKDGKMYVGSFGKEYTNPDGSIKNTNNMWISIIDRNGVVTHEDWTDQFNKLREAVGCPYPGYMIHEAITWSPVRRQWVILPRRVSKEAYDENEDERRGSNTVIFASEDFSKIEVKHITPLTPTRGFSDFK 299
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BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Match: A0A6U5LCD9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5LCD9_9STRA)

HSP 1 Score: 206 bits (525), Expect = 2.790e-63
Identity = 99/181 (54.70%), Postives = 132/181 (72.93%), Query Frame = 1 
Query:    4 MMTVDDRTGIVFEIVEDDDGRH--MAPRYIIPEGDGTVDKGMKLEWATVKDGKLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAEAGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILIVDEDF---RKVEVRHAGENIPTHGFSSFK 531
            +++ DDRTG ++E++ ++DG+   + PR ++ EGDG  DKGMK EWATVKDG L +GS+GKEFT+  G+I   NNNWV +++ HG V  +DWTEKY  +R+  GA  PGY+IHE+  WS  + KWVFLPRR+S EAY+D+ DE+ GSN I+IVDE+F     VEV  A +N P HGFSSFK
Sbjct:   64 LLSFDDRTGSIYELISNEDGKKTIVVPRLVVTEGDGDTDKGMKFEWATVKDGNLFVGSLGKEFTNLDGSIANLNNNWVAVVNPHGEVFRKDWTEKYNAVRSALGAERPGYLIHEAIEWSRHMRKWVFLPRRVSSEAYNDVSDERKGSNKIVIVDENFVSFEVVEVNFASKN-PLHGFSSFK 243
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BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Match: A0A196SJW8_BLAHN (Soluble calcium-activated nucleotidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SJW8_BLAHN)

HSP 1 Score: 203 bits (516), Expect = 3.620e-61
Identity = 94/176 (53.41%), Postives = 128/176 (72.73%), Query Frame = 1 
Query:    4 MMTVDDRTGIVFEIVEDDDGRHMAPRYIIPEGDGTVDKGMKLEWATVKDGKLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAEAGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILIVDEDFRKVEVRHAGENIPTHGFSSFK 531
            + + DDRTGIV+E+V+   G    PR+I+ EG+G  +KG K EWATVKDGK+++GS GKE+T+  G+I   NN WV  ID +G+V H DWTE Y +LR   G S+PGYMIHE+ AWS  ++KWV LPRR+S++ YD+++DE+ GSN +L+V E+F+K+EVR      PT GFS FK
Sbjct:  156 LYSFDDRTGIVYEMVK---GNKAIPRFILMEGNGDTEKGQKSEWATVKDGKMIVGSFGKEYTNPDGSIRNTNNMWVSTIDSNGHVEHVDWTENYNRLRKAVGCSYPGYMIHEAIAWSQHMKKWVVLPRRVSNQPYDEVEDERRGSNLVLLVSENFKKIEVRRITPITPTRGFSDFK 328
[Close]
BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Match: A0A196S865_BLAHN (Soluble calcium-activated nucleotidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S865_BLAHN)

HSP 1 Score: 202 bits (514), Expect = 1.060e-60
Identity = 95/172 (55.23%), Postives = 121/172 (70.35%), Query Frame = 1 
Query:   16 DDRTGIVFEIVEDDDGRHMAPRYIIPEGDGTVDKGMKLEWATVKDGKLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAEAGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILIVDEDFRKVEVRHAGENIPTHGFSSFK 531
            DDRTG+VFEI     G    PR+I+ EGDG  DKG K EWATVKDGK+ +GS GKE+T+  G+I   NN WV +ID++G V HEDWT ++ K+R  AG  +PGYMIHE+ +WS    +WV LPRR+S E YD+ +DE+ GSNT+L+  EDF ++EVRH     PT GFS FK
Sbjct:  178 DDRTGLVFEIR----GSKAIPRHILMEGDGNTDKGQKTEWATVKDGKMYVGSFGKEYTNPDGSIKNTNNMWVSIIDKYGAVSHEDWTARFNKVREAAGCPYPGYMIHEAISWSPARRQWVILPRRVSQEPYDENEDERRGSNTVLLASEDFSRIEVRHITPLTPTRGFSDFK 345
[Close]
BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Match: A0A196S3X9_BLAHN (CANT1 soluble calcium-activated nucleotidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S3X9_BLAHN)

HSP 1 Score: 199 bits (505), Expect = 9.860e-60
Identity = 94/172 (54.65%), Postives = 120/172 (69.77%), Query Frame = 1 
Query:   16 DDRTGIVFEIVEDDDGRHMAPRYIIPEGDGTVDKGMKLEWATVKDGKLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAEAGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILIVDEDFRKVEVRHAGENIPTHGFSSFK 531
            DDRTG+VFEI     G    PR+I+ EGDG  DKG K EWATVKDGK+ +GS GKE+T+  G+I   NN WV +ID++G V HEDWT ++ K+R  AG  +PGYMIHE+ +WS    +WV LPRR+S E YD+ +DE+ GSNT+L+  EDF ++EV H     PT GFS FK
Sbjct:  144 DDRTGMVFEIR----GSKAIPRHILMEGDGNTDKGQKTEWATVKDGKMYVGSFGKEYTNPDGSIKNTNNMWVSIIDKYGAVSHEDWTARFNKVREAAGCPYPGYMIHEAISWSPARRQWVILPRRVSQEPYDENEDERRGSNTVLLASEDFSRIEVCHITPLTPTRGFSDFK 311
[Close]
BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Match: D8LZ82_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LZ82_BLAHO)

HSP 1 Score: 199 bits (507), Expect = 1.600e-59
Identity = 94/172 (54.65%), Postives = 118/172 (68.60%), Query Frame = 1 
Query:   16 DDRTGIVFEIVEDDDGRHMAPRYIIPEGDGTVDKGMKLEWATVKDGKLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAEAGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILIVDEDFRKVEVRHAGENIPTHGFSSFK 531
            DDRTGI FEI     G    PRYI+ EGDG  DKG K EWATVKD K+  GS GKE+T+  G+I   NN WV +ID HG + HEDWT++Y KLR   G  +PGYMIHE+ +WS   ++WV LPRR+S + YD+ +DE+ GSNT+++  EDF ++EVRH     PT GFS FK
Sbjct:  190 DDRTGIAFEIR----GSKAIPRYIMMEGDGNNDKGQKTEWATVKDDKMYAGSFGKEYTNPDGSIKNTNNMWVSVIDSHGQITHEDWTDRYNKLRQAVGCPYPGYMIHEAISWSPHRKQWVILPRRVSKKPYDENEDERRGSNTVILASEDFSEIEVRHITTLTPTRGFSEFK 357
[Close]
BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Match: D8MAA1_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MAA1_BLAHO)

HSP 1 Score: 198 bits (504), Expect = 1.630e-59
Identity = 90/176 (51.14%), Postives = 121/176 (68.75%), Query Frame = 1 
Query:    4 MMTVDDRTGIVFEIVEDDDGRHMAPRYIIPEGDGTVDKGMKLEWATVKDGKLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAEAGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILIVDEDFRKVEVRHAGENIPTHGFSSFK 531
            + + DDRTG+VFE+V+   G    PRYI+ EGDG   KG K EWATVKD  ++ GS GKE+T++ G+I   NN WV +I   G + HE+WT+++ KLR  AG  +PGYMIHE+  WSD+  +WV LPRR+S E YD+ +DE+ GSN +++  EDF  +EVRH  +  PT GFS FK
Sbjct:  139 LYSFDDRTGLVFELVK---GNKAIPRYILMEGDGNTTKGQKTEWATVKDDAILAGSFGKEYTNADGSIANTNNMWVSVIHNTGEITHENWTDRFNKLRKAAGCPYPGYMIHEAIMWSDIRRQWVILPRRVSKEPYDEKEDEKRGSNVVMLASEDFSSIEVRHITQITPTRGFSEFK 311
[Close]
BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Match: A0A7S2UTY5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTY5_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.570e-58
Identity = 92/175 (52.57%), Postives = 124/175 (70.86%), Query Frame = 1 
Query:   10 TVDDRTGIVFEIVEDDDGRHMA-PRYIIPEGDGTVDKGMKLEWATVKDGKLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAEAGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILIVDEDFRKVEVRHAGENIPTHGFSSFK 531
            T DDRTGI+FE+ +      MA PR I+ EGDG  DKGMK+EWATVKDG + LGS+GKE+T   G++   NN WV  +D  G V H D+ ++Y KLR+ AGA +PGY+IHE+ AWS+ L +WV LPRR+S+EAYD+  DE+ GSN +++ DE F ++++   G+  P  GFSSFK
Sbjct:   86 TFDDRTGIIFEVEDAAGASPMAVPRNIVMEGDGNTDKGMKIEWATVKDGLMYLGSMGKEYTRPDGSVANTNNLWVVTVDRDGVVTHHDYKDQYAKLRSVAGAGWPGYLIHEAIAWSEALRRWVILPRRVSEEAYDEELDEKKGSNMVMLADEGFEQIKLFRVGQITPERGFSSFK 260
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17224.4027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4A7_ECTSI2.760e-8669.49Apyrase family protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835Z277_9STRA1.100e-6555.93Apyrase family protein n=1 Tax=Tribonema minus Tax... [more]
UPI000711D1E86.400e-6455.11hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
A0A6U5LCD9_9STRA2.790e-6354.70Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A196SJW8_BLAHN3.620e-6153.41Soluble calcium-activated nucleotidase n=1 Tax=Bla... [more]
A0A196S865_BLAHN1.060e-6055.23Soluble calcium-activated nucleotidase n=1 Tax=Bla... [more]
A0A196S3X9_BLAHN9.860e-6054.65CANT1 soluble calcium-activated nucleotidase n=1 T... [more]
D8LZ82_BLAHO1.600e-5954.65Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
D8MAA1_BLAHO1.630e-5951.14Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
A0A7S2UTY5_9STRA1.570e-5852.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17224contigH-paniculata_contig17224:430..5261 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.2
Seed ortholog evalue3.5e-70
Seed eggNOG ortholog2880.D7G4A7
Preferred nameCANT1
KEGG rclassRC00002
KEGG koko:K12304,ko:K17300
KEGG ReactionR00155,R00328,R00961
KEGG Pathwayko00230,ko00240,map00230,map00240
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004382,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006029,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006213,GO:0006220,GO:0006244,GO:0006256,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006986,GO:0007154,GO:0007165,GO:0007275,GO:0007369,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009134,GO:0009135,GO:0009137,GO:0009138,GO:0009140,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009179,GO:0009181,GO:0009185,GO:0009191,GO:0009193,GO:0009195,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009790,GO:0009987,GO:0010033,GO:0010259,GO:0012505,GO:0016020,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0017111,GO:0018130,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0023052,GO:0030141,GO:0030166,GO:0030968,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0031984,GO:0032501,GO:0032502,GO:0032940,GO:0033554,GO:0034404,GO:0034620,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034656,GO:0034774,GO:0034976,GO:0035295,GO:0035580,GO:0035966,GO:0035967,GO:0036230,GO:0040008,GO:0040009,GO:0042119,GO:0042175,GO:0042221,GO:0042278,GO:0042454,GO:0042581,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043262,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045134,GO:0045321,GO:0046048,GO:0046128,GO:0046130,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046710,GO:0046712,GO:0046872,GO:0046903,GO:0046983,GO:0048565,GO:0048598,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055086,GO:0055123,GO:0060205,GO:0060465,GO:0065007,GO:0070013,GO:0070820,GO:0070887,GO:0071310,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:0097708,GO:0098827,GO:0099503,GO:0101002,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1904724,GO:1904813
EggNOG free text desc.guanosine-diphosphatase activity
EggNOG OGsKOG4494@1,KOG4494@2759
EC3.6.1.6
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Exons4
Model size531
Cds size528
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17224.4027.1prot_H-paniculata_contig17224.4027.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17224 430..5258 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929358.6624415-CDS-H-paniculata_contig17224:429..5291622929358.6624415-CDS-H-paniculata_contig17224:429..529Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17224 430..529 -
1691480829.348535-CDS-H-paniculata_contig17224:429..5291691480829.348535-CDS-H-paniculata_contig17224:429..529Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17224 430..529 -
1622929358.6861224-CDS-H-paniculata_contig17224:1091..12351622929358.6861224-CDS-H-paniculata_contig17224:1091..1235Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17224 1092..1235 -
1691480829.3592763-CDS-H-paniculata_contig17224:1091..12351691480829.3592763-CDS-H-paniculata_contig17224:1091..1235Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17224 1092..1235 -
1622929358.7008367-CDS-H-paniculata_contig17224:3439..36461622929358.7008367-CDS-H-paniculata_contig17224:3439..3646Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17224 3440..3646 -
1691480829.3690722-CDS-H-paniculata_contig17224:3439..36461691480829.3690722-CDS-H-paniculata_contig17224:3439..3646Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17224 3440..3646 -
1622929358.7519279-CDS-H-paniculata_contig17224:5181..52581622929358.7519279-CDS-H-paniculata_contig17224:5181..5258Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17224 5182..5258 -
1691480829.3847654-CDS-H-paniculata_contig17224:5181..52581691480829.3847654-CDS-H-paniculata_contig17224:5181..5258Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17224 5182..5258 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929358.7647567-UTR-H-paniculata_contig17224:5258..52611622929358.7647567-UTR-H-paniculata_contig17224:5258..5261Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17224 5259..5261 -
1691480829.393946-UTR-H-paniculata_contig17224:5258..52611691480829.393946-UTR-H-paniculata_contig17224:5258..5261Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17224 5259..5261 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17224.4027.1

>prot_H-paniculata_contig17224.4027.1 ID=prot_H-paniculata_contig17224.4027.1|Name=mRNA_H-paniculata_contig17224.4027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp
MMTVDDRTGIVFEIVEDDDGRHMAPRYIIPEGDGTVDKGMKLEWATVKDG
KLVLGSIGKEFTDSTGAITGYNNNWVDLIDEHGNVVHEDWTEKYEKLRAE
AGASFPGYMIHESAAWSDVLEKWVFLPRRLSDEAYDDMKDEQVGSNTILI
VDEDFRKVEVRHAGENIPTHGFSSFK
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mRNA from alignment at H-paniculata_contig17224:430..5261-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17224.4027.1 ID=mRNA_H-paniculata_contig17224.4027.1|Name=mRNA_H-paniculata_contig17224.4027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4832bp|location=Sequence derived from alignment at H-paniculata_contig17224:430..5261- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGATGATGACTGTTGATGACCGCACAGGTATCGTGTTCGAGATCGTTGA
GGACGACGACGGACGGCATATGGCACCTCGGTATGTATGTGTGTGTATCC
ATGTGTGGACGATCAGTTGCGATGTACATTACCTATCGCGATGGTCGGTA
TTAGGAGATTCGTGGCGATGTACGGTGTCGCGGTCAAGGAAATAGTCTCG
TAAATGTGGCGAGTCTCCTCATTGGGCGTAGCTGGTACTTTGTTTGAAGT
TGCGTGATGGAATAATGCCGCACGTGACGCGACTAAAACAAAAAACAAAA
AAAACTTGAAAGAAGTCTTTTCACGTGAACGGCATTTTACACATTTATTT
TCCACGTGACCAGAACCGGAACCGGTTCCCGGCAGGATTGGTTCGGGCCT
GTGAAAGTAAATGTGAACAGCCCTGAAAGTAAGGAACATTGTATTGTAAT
GGAGGAAGGGAGGTGGGGGGGGGGGTGTTATTCAATAAGGTAGGGAGGAT
TAAACAGTTCCATTACTGAAATTAAAAAAAAATTCGAATAAAGAAAAGAG
AGAAAATGTCGCACAGCTTTAACGTTTAGCTGGGGAGATGCTGCAAGTAA
GCATTCAGCACGGCACAGGATTCGGTGAATCATTCTCTCTTCTCATGCAA
CTCCCGTCGTGGTGGCTAGTGTTCAGACTTGGGAAATGAGTGGTTATGTA
GTTGGGAGATTGTGGCCTATATGTCAACGTCAGCATGGTTGGTATGTGTG
TTAAGACCAAGTATTTTAACGCAGCCTTTTATTTGATATTATTTTGTTGA
TAAGGGTTCGTTCTGAGGGGAACTCTTATATAAGGTCTCCGAAAAATATT
CAGATATGCTTGATAAAAATCAACGATTCGCCTCTTATTTTTAGGGAAAA
AGATATGGCTCTTTCTGGACGACTTAAAAGCCTGATACTTTTTGTAGATT
TTTCCATTTTTTTTTCCCCCCTCCGCTAGAAAATGACCATGAGGGTGGGT
ACACAAGTGATATGTGAGTTCAGCCGCATAACCTCTACATGGGTACAACA
TAGTAATTATATATATATATATATATATATATATATATGTATATTGAGCG
TTAGAGCTTAGCCCTTATCAACTATGGCAAGTAGGTTGGCGGGGACATGA
GAACCTCGACGAGTGAAGGATGTTCTTTTTTTAGGGGTGTCAATCCTTGT
GGAAACTATCTCGTGTTTTACGTACAGTAACACACGCGAGAGATACGCTC
AAGTATTCCCTTGTGAAAATTGCCGTAGCCCATGTTATGCCTGCGAATAA
TCCTGGTACTCGGTCATGATGAGTGTCAAAAATGTATGTAATGTAATGTG
AGCAGGGCTCTGTTTTATTCACCACGCAACAGAAACCCCCAACTATTCAC
GGAGATCCATTCGAAAGTAGATTCGCCTGGAGGTATGCGTGAGTGGATCT
GGATGAGATGTTGGCCGTTGGAAATCGCTCGGAGAGGAACAATGCTCCGT
CCTCCCGAAGAGGCATGGTCAATGATGACATAACAACCACGGGATGATAA
GCACGAGTTCCTCCCCCCCCTCTCCGTGCGACGTGCATGCTACCACCGGG
AACGTCCCCGGACAGGTACATCATTCCGGAGGGGGACGGGACAGTAGACA
AGGGTATGAAACTAGAGTGGGCGACTGTAAAGGACGGTAAGCTGGTGTTG
GGGAGCATCGGTAAGGAATTCACGGACAGCACCGGCGCCATCACCGGCTA
CAATAACAACTGGGTGGACTTGATCGACGAACACGGAAATGTCGTCCACG
AGGACTGGACCGAGAAATACGAGTGAGATCATTGTTGTTGTTGGTGGTGG
TAGTGGTGGTGGTGGTGGTGGTTTTTCATTTATATGTAGATGATTGTTCG
ATGATGTTGCCGTTCTTGTCATTTGTTTTGTTGGTACGCATAGTCTATAA
CCATTTTATTCATTTTATTCATTTTATTCATTTTATTCATTTTATTCATT
TTATTCATTTTATTCATTTTATTCATTTTATTCATTTTATTCATTTTATT
CATTTTATTCATTTTATTCATTTTATTCATTTTATTCATTTTATTCATTT
TATTCATTTTATTCATAATCACACACGAAGCGACATGTTCGCTGTGTGTG
GGGGGGGGCGTTGTTTATACTTGCAAACAAAGATCGAAGTCCTGTGCGGT
ACTTGAAGTTTTTTTTGGGTGGGTTTTAACCCCCACAAGGCTAAGGCAAA
AACCTTTCTCGGATGTTTCCATACTTGAGTATTCTACCAAAGTATTCCTA
CATTTCCTTTAACAGAACAGAGTTATTTATTCCTCTGTGGGATAGGCGCC
ACCCCGGATCGGCCGAACCAAGTAGGCAGTGTGGGGGTTGCACCCACTAA
AAGACCTCTGACTAGACTTACAGTTATGCTTAGTTCACGAGCTACCCTAC
CCGTTCGGGCGTAGGTCCGTGGTACTTGGAGGGATTTAGTCACGCACGGC
GAATGTACAACATTTGGTTATCCGGGGTGCCCAAACGTCCATGGCAGAAT
CCGGTTGACGTAGCAATGCAAAAATTATGTCGAGTGGCTAGTATCACCCT
TGTGAGTCGTAGCCTAGCCAGCGAACATCCCCCGCCCGCCCTCCCTCGTT
CCCTCACTCCACTCCACTCCTCTCCACTCTGCTTCGATGGTTTCCAGAGG
GTAATTTGAGTTACGAATCGAGAGGTGTTGTTCTTGTTTACGCGGGAAGA
TGTAGCTGTGACTGTCAATGTATCATAGTACAAAGCCACAAGGTACGATT
TACGATTGCCGACGTGAAGTGAATATGCGAGAAGATTCAAATTATCAAAG
ACGCCTCGAAAAAGAAGCAAGATACACAAAACACGAAGCGGATAGATACA
GGCTAGACTTCAGCCACAACTGTAAAATTTCCCCTCTTGAGGTTTTGTGA
CCGATAGCTGCCACAAACTACAGATCGACTTCAAGCTGAGGATAAAATAG
AGATAGCAACGTGATGCCTTCCATGCTACGAGCTGTGGTTCCCAAGAAAA
CCGGAGATAACCACATGTGTATACTTTTATGCCATATATATACTTCAAGC
TGAGGATAAAATAGAGATAGCAACGTGATGCCTTCCATGCTACGAGCTGT
GGTTCCCAAGAAAACCGGAGATAACCACATGTGTATACTTTTATGCCATA
TATATATATATACTATGCACCAGGACGGGGGGTGGGTGCGTTCACCCGAC
GCATCTCTATTTCTATCCTACATATCTGCATACATACTCGTCTGTCGCCG
CCCTTATCGATTAGAACGTCTTTTCACCGAAAAGACACCTCTTGTATGAC
CTGATTGCGCAGATGAAGGCAGGCTACCATCTTGGTAGGCGGCGATATGG
TTGAGGTATTGTACCGGCTCCCACAGTATGTACGATCCCTCTTGTCCTCC
TCCACAGACTGTATTATATTATTATTATAGTATATAATAACTTATGATAT
TTAAAAAACTTTTTTTTTTTTTTTGTCTGGGAGATGGAATAAATTCAACC
CCCCAGAGAAATACGAATACTTACTTGCTAATGGTTCTTCACAACAAACT
GAAAATATTCGCTTGAGTTTTAGAATGAGCGGACACAATTGAATAAAGTA
CCCACCCCTGTTCATTCCCTTTACGAGTATTACGATCACACCCTTGGATG
GTGCCTGCAATATAAAAACACACGAGTTCGTTCTGAACCTCAGACGAATA
CTTTCAGTTTCTTTGTGAAAAGTATTTGCAACTATTCGTATTTGTCCACG
GGTGAAAAAATACATTACAACAAAAAAAAAAATACTGTGTGTGTGTTTTT
TTTTTAAAAACATTTTTGCTTCAATATATATATATATTTCCCATTACCCG
CGACATGGAACAAAAAACACATCAACCCCCCGTAAATTATTGTTCGATGG
TTTTTATTTTAATGTCTACAACATATTATAATATACAACCCCCCCGCCCC
CCCCCAAAAAAAAAATAAATAAATAGGAAACTCCGGGCGGAAGCCGGGGC
GTCTTTCCCGGGTTACATGATTCATGAATCAGCGGCGTGGAGCGACGTGC
TCGAGAAGTGGGTATTCTTGCCGCGGAGGCTCAGCGACGAAGCCTACGAC
GACATGAAGGACGAGCAGGTGTCTGTACGGGGGGGGAAATGTGGCGTGAA
CCTTGGTGTTTGACTCGTCTTGATCTAGTCTTGCCTCTGCTTTCACTTAC
GAAAAAACGACACAACAATCGTCTAATAATTATGTATAATTTACCAAGGA
ATACCGCCTGCTGCAGCTGTATGCTCAGCTGGGCTACACTTTTACGCAGC
CCCGCCCCCCCCTCAAGCAGAGTGTTTGCAGAATACATATTATATATATA
TGTATTGTGATGAATTGCAATCTCGGCCTGTATGGGTCATGGTGAGCTAG
CTCTGTAAGTCTCGAACCCCGGTCCACCTGCTCACAATGCCTCGCTGTAA
AATGAGTCCTCTTGTATAATTGGTCACACTTCGTTAAGTTCGCGGAACAC
TCGGATTGTGAAAAAAAGCATTTCGTTTTGCATCGCGAACGCTCTACTCA
GTGTTGTATTTCCGTGGTGCCCTGTACAAATTACGCAAGCTATCTGATTC
TCGCACAAACGTCTGTTCGTTGTTGTGGTGGTGGTGGTGGTCGTGGTCGT
GGTCCCGTTGTATATTTTCCTTCATGACAGAGGGGGTCTAACACCATCCT
GATCGTGGATGAAGACTTCCGAAAGGTGGAAGTGAGGCACGCCGGAGAGA
ACATACCTACTCACGGATTTTCGTCCTTTAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig17224:430..5261-

>mRNA_H-paniculata_contig17224.4027.1 ID=mRNA_H-paniculata_contig17224.4027.1|Name=mRNA_H-paniculata_contig17224.4027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1056bp|location=Sequence derived from alignment at H-paniculata_contig17224:430..5261- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGACTGTTGATGACCGCACAGGTATCGTGTTCGAGATCGTTGAGGA
CGACGACGGACGGCATATGGCACCTCGATGATGACTGTTGATGACCGCAC
AGGTATCGTGTTCGAGATCGTTGAGGACGACGACGGACGGCATATGGCAC
CTCGGTACATCATTCCGGAGGGGGACGGGACAGTAGACAAGGGTATGAAA
CTAGAGTGGGCGACTGTAAAGGACGGTAAGCTGGTGTTGGGGAGCATCGG
TAAGGAATTCACGGACAGCACCGGCGCCATCACCGGCTACAATAACAACT
GGGTGGACTTGATCGACGAACACGGAAATGTCGTCCACGAGGACTGGACC
GAGAAATACGAGTACATCATTCCGGAGGGGGACGGGACAGTAGACAAGGG
TATGAAACTAGAGTGGGCGACTGTAAAGGACGGTAAGCTGGTGTTGGGGA
GCATCGGTAAGGAATTCACGGACAGCACCGGCGCCATCACCGGCTACAAT
AACAACTGGGTGGACTTGATCGACGAACACGGAAATGTCGTCCACGAGGA
CTGGACCGAGAAATACGAGAAACTCCGGGCGGAAGCCGGGGCGTCTTTCC
CGGGTTACATGATTCATGAATCAGCGGCGTGGAGCGACGTGCTCGAGAAG
TGGGTATTCTTGCCGCGGAGGCTCAGCGACGAAGCCTACGACGACATGAA
GGACGAGCAGGTGAAACTCCGGGCGGAAGCCGGGGCGTCTTTCCCGGGTT
ACATGATTCATGAATCAGCGGCGTGGAGCGACGTGCTCGAGAAGTGGGTA
TTCTTGCCGCGGAGGCTCAGCGACGAAGCCTACGACGACATGAAGGACGA
GCAGGTGGGGTCTAACACCATCCTGATCGTGGATGAAGACTTCCGAAAGG
TGGAAGTGAGGCACGCCGGAGAGAACATACCTACTCACGGATTTTCGTCC
TTTAAGGGGGTCTAACACCATCCTGATCGTGGATGAAGACTTCCGAAAGG
TGGAAGTGAGGCACGCCGGAGAGAACATACCTACTCACGGATTTTCGTCC
TTTAAG
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