prot_H-paniculata_contig17212.4021.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17212.4021.1
Unique Nameprot_H-paniculata_contig17212.4021.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
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BLAST of mRNA_H-paniculata_contig17212.4021.1 vs. uniprot
Match: D8LN20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN20_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 3.270e-8
Identity = 37/64 (57.81%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:    6 RGLKPERSAQAKSDFRYTLPTDYPFSFSTSSNYTHDFNSVDGMSMFSTASSVVNPSSVRGIVHR 69
            RGLKPER     S F+Y L  D   S S SS Y     ++D MS+FS ASSVVNP SVRGIVHR
Sbjct:    9 RGLKPERMEPPPSMFKYQLEGD---SISGSSYYDPYSVTMDNMSVFSAASSVVNPQSVRGIVHR 69
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17212.4021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN20_ECTSI3.270e-857.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17212contigH-paniculata_contig17212:4337..5584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17212.4021.1mRNA_H-paniculata_contig17212.4021.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17212 4337..5584 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17212.4021.1 ID=prot_H-paniculata_contig17212.4021.1|Name=mRNA_H-paniculata_contig17212.4021.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
MPFFTRGLKPERSAQAKSDFRYTLPTDYPFSFSTSSNYTHDFNSVDGMSM
FSTASSVVNPSSVRGIVHR*
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