mRNA_H-paniculata_contig1721.4019.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Match: A0A6H5KNV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV1_9PHAE) HSP 1 Score: 246 bits (627), Expect = 9.980e-71 Identity = 164/407 (40.29%), Postives = 215/407 (52.83%), Query Frame = 1
Query: 394 CFEKLLPLDVNNDSLERTLRRDAELIDVPDEAETFWVSSDAQPTTALEKIAKAVFDFHVANLPVPTLLHRSSVLPGR--------DRDGNTPTSNSKAKNTGEASDGDNGKSPGYELAFSGAEWWIQIREEGYHSDLGMPFHWDKDERLRETTGVMKYPEVSTVTYLTEHGAPTMVLESCATEQGVVVEGRLRRAFLSYPSLFKHLAFDGRFLHGVPEIMTRKYSSRRVDSRSRSQQYPMERHPDPEQGHGALEPGSSGRSATLASAEVDSAASCGQKRARGRMRVTLLVNVWLSHKPLEIAPLPQAIAAMLSRAPDLPVLNFDHPVMFSPVRLPVNDAVSNGDDSDRGV---ALTATVAVKMALGTATFLEMCVPRSETMSEGKRRGLHAFLLQLEDGFRARISGV 1581
C+E+++ + +L+ L RD ELID P EA+TFW+ +DA P T+LE+IAKA++DFHVAN T H+ S L G GN P+ + +AS G SGAEWW+Q REEG H+ +GMPFHWDKDE + E G++ P VSTVTYLT +GAPT+VLE+ AT G V EG + + F+SYP+LFKHLAFDG FLHGVPE + R R R G G + +S G +R +GRMRVT LVNVWLSHKP I LP +A LS +P L FD P F PV + + D G +++ + + LG LE+ P E +S G + +F L +G +RIS V
Sbjct: 4 CYERVMGM-----TLQDALLRDVELIDNPHEAKTFWLPADACPATSLERIAKAIYDFHVANKQ-HTHGHQDSALTGPVGSTPSAVAHSGNIPSRDKPGVVRRDASSHTGG-------VESGAEWWVQQREEGRHASVGMPFHWDKDEEMLEQEGLVVCPSVSTVTYLTGYGAPTVVLEARATGSGTVQEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMRTGDQRVSGKVGRD---------------GGRREARGGNDNHGIRSRTSLPSSNGTRRRQGRMRVTFLVNVWLSHKPKGITSLPADVAGSLSNI-SVP-LCFDRPGDFVPVPVEKEQETQPSQEEDGGSIRGTKPSSMLLNVPLGPTLLLEVRAPTPERLSTGGFKENDSFALVYAEGSHSRISTV 380
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Match: D7G6Z0_ECTSI (Putative LuxR domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z0_ECTSI) HSP 1 Score: 191 bits (485), Expect = 4.060e-52 Identity = 110/229 (48.03%), Postives = 138/229 (60.26%), Query Frame = 1
Query: 394 CFEKLLPLDVNNDSLERTLRRDAELIDVPDEAETFWVSSDAQPTTALEKIAKAVFDFHVANL------------PV---PTLLHRSSVLPGRDRDGNTPTSNSKAKNTGEASDGDNGKSPGYELAFSGAEWWIQIREEGYHSDLGMPFHWDKDERLRETTGVMKYPEVSTVTYLTEHGAPTMVLESCATEQGVVVEGRLRRAFLSYPSLFKHLAFDGRFLHGVPEIMTR 1035
C+E++L + + L RD ELID P EA+TFW+ +DA P T+LEKIAKA+FDFHVAN PV P+ + +P RD+ G S E SGAEWW+Q REEG H+ LGMPFHWDKDE++ E G++ P VSTVTYLT +GAPT+VLE+ AT V EG + + F+SYP+LFKHLAFDG FLHGVPE + R
Sbjct: 4 CYERVL-----GTTRQDALLRDVELIDNPHEAKTFWLPADACPATSLEKIAKAIFDFHVANKQHIGQQDSAPTGPVGSTPSAVAHGENIPCRDKPGVVRRDTSSRTGCVE----------------SGAEWWVQQREEGRHASLGMPFHWDKDEQMLEQEGLVVCPAVSTVTYLTGYGAPTVVLEARATGSRTVEEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMR 211
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Match: A0A7R9TJB1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TJB1_MICPS) HSP 1 Score: 121 bits (303), Expect = 2.150e-26 Identity = 109/344 (31.69%), Postives = 145/344 (42.15%), Query Frame = 1
Query: 322 ASVRDDSTNTITGSKLPAVQFDTCCFEKLLPLDVNNDSLE-------RTLRRDAELIDVPDEAETFWVSSDAQPTTALEKIAKAVFDFHVANLPVPTLLHRSSVLPGRDRDGNTPTSNSKAKNTGEASDGDNGKSPGYELAFSGAEWWIQIREEGYHSDLGMPFHWDKDERLRETTGVMKYPEVSTVTYLTEHGAPTMVLESCATEQGVVVEG---RLRRAFLSYPSLFKHLAFDGRFLHGVPEIMTRKYSSRRVDSRSRSQQYPMERHPDPEQGHGALEPGSSGRSATLASAEVDSAASCGQKRARGRMRVTLLVNVWLSHKPLEIAPLPQAIAAMLSRAPDL 1323
ASV D+ + G+ A+ F F + L L ++D+ + + L RDA V E+FW+++DA P ALE +A+AVFD HV + VL + N EA GD G GAEWW Q+R + FHWDKDE L + GV+ +P +STVTYLT GAPT+VLE A +G + F+SYP KH++FDGRFLHG + R D E+G+ RVT LVNVWL +KP I P+ L+ AP L
Sbjct: 8 ASVAIDANGRVAGAD--ALDFSFRSFPRFLLLRDDDDAGDPRDGFRAKALLRDATRAFV---GESFWLAADAAPRCALESLARAVFDRHVP----------ADVLRAFQQ-----------TNADEARFGDGRFGGG-----CGAEWWTQVRRVDDECREAVAFHWDKDEDLVDDFGVVVHPLISTVTYLTSSGAPTVVLEKTAPTSYAETDGFRGSIAGGFVSYPLAGKHVSFDGRFLHGASRELARPT--------------------DVEEGY---------------------------------ERVTFLVNVWLGYKPRGIDAFPEEAFDALTPAPAL 267
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Match: A0A7S1E7H6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E7H6_HEMAN) HSP 1 Score: 114 bits (285), Expect = 2.010e-25 Identity = 64/182 (35.16%), Postives = 90/182 (49.45%), Query Frame = 1
Query: 487 AETFWVSSDAQPTTALEKIAKAVFDFHVANLPVPTLLHRSSVLPGRDRDGNTPTSNSKAKNTGEASDGDNGKSPGYELAFSGAEWWIQIREEGYHSDLGMPFHWDKDERLRETTGVMKYPEVSTVTYLTEHGAPTMVLESCATEQGVVVEGRLRRAFLSYPSLFKHLAFDGRFLHGVP-EIM 1029
A++FW+S+ A+P LE++A+ VFD H L P ++ SGAEWW+ R + FHWD+DE + T +P V+TVTYL+EHGAPTM+LE +G E ++ A+LS+P KH++FDGR LHGVP E+M
Sbjct: 20 AQSFWLSASAEPRFTLERMARHVFDLHTRGLAKP-----------------------------------------FDPKTSGAEWWVHFRGPSARDGEAIGFHWDRDEVYADVTHQNVHPHVATVTYLSEHGAPTMILEQLPISKG---ESTVQAAYLSHPKFGKHVSFDGRLLHGVPPELM 157
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Match: A0A7S0LWM3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LWM3_9CRYP) HSP 1 Score: 116 bits (290), Expect = 3.550e-25 Identity = 79/276 (28.62%), Postives = 116/276 (42.03%), Query Frame = 1
Query: 493 TFWVSSDAQPTTALEKIAKAVFDFHVANLPVPTLLHRSSVLPGRDRDGNTPTSNSKAKNTGEASDGDNGKSPGYELAFSGAEWWIQIREEGYHSDLGMPFHWDKDERLRETTGVMKYPEVSTVTYLTEHGAPTMVLESCATEQGVVVEGRLRRAFLSYPSLFKHLAFDGRFLHGVP-EIMTRKYSSRRVDSRSRSQQYPMERHPDPEQGHGALEPGSSGRSATLASAEVDSAASCGQKRARGRMRVTLLVNVWLSHKPLEIAPLPQAIAAMLSRAP 1317
++W+++DA P +LE +A+AVF++H A L PG Y+ A +GAEWW+ R + FHWD+DE + +P+++TVTYL++HGAPTM+LE G R A+LS+P L KH +FDGR LHGVP E+M Q R G R+T LVN+W++H+ L P P + A+++S +P
Sbjct: 70 SYWLAADAAPRFSLEWLARAVFEYHTARLG-----------PGD-----------------------------YDPARTGAEWWVHFRGPAAADGEAIGFHWDRDEYYADAAKQNVHPQIATVTYLSDHGAPTMILEQVPIAPGRTATPRT--AYLSHPRLGKHASFDGRLLHGVPPELMVP------------------------------------------------------QARKAGYTRITFLVNIWVNHRLLNTEPWPDSDASLISPSP 249
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Match: A0A7S0EVP4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EVP4_9CRYP) HSP 1 Score: 112 bits (280), Expect = 8.920e-25 Identity = 75/266 (28.20%), Postives = 105/266 (39.47%), Query Frame = 1
Query: 493 TFWVSSDAQPTTALEKIAKAVFDFHVANLPVPTLLHRSSVLPGRDRDGNTPTSNSKAKNTGEASDGDNGKSPGYELAFSGAEWWIQIREEGYHSDLGMPFHWDKDERLRETTGVMKYPEVSTVTYLTEHGAPTMVLESCATEQGVVVEGR-LRRAFLSYPSLFKHLAFDGRFLHGVPEIMTRKYSSRRVDSRSRSQQYPMERHPDPEQGHGALEPGSSGRSATLASAEVDSAASCGQKRARGRMRVTLLVNVWLSHKPLEIAPLPQ 1287
+FW+ ++ P LE +AK +F+FH AN+ GY+ SGAEWW+Q R + FHWD+DE + T +P++ TVTYL++HGAPT+VL+ +G E R + LS+P L KH+ FDGRFLHGVP ++R R+T LVNVW+SH P + AP P+
Sbjct: 23 SFWLPANQTPRFTLEMLAKRIFEFHTANVK------------------------------------------GYDATKSGAEWWVQFRGSKSAHGKSIGFHWDRDEFYADRTDQNVHPQIGTVTYLSKHGAPTLVLDQIPIPKG---ESRDIHSGALSHPKLGKHICFDGRFLHGVPAELSRHLKDDNFT------------------------------------------------------RITFLVNVWISHIPTDTAPWPE 189
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Match: L1JH63_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JH63_GUITC) HSP 1 Score: 117 bits (293), Expect = 9.710e-25 Identity = 84/301 (27.91%), Postives = 121/301 (40.20%), Query Frame = 1
Query: 493 TFWVSSDAQPTTALEKIAKAVFDFHVANLPVPTLLHRSSVLPGRDRDGNTPTSNSKAKNTGEASDGDNGKSPGYELAFSGAEWWIQIREEGYHSDLGMPFHWDKDERLRETTGVMKYPEVSTVTYLTEHGAPTMVLESCATEQGVVVEGR-LRRAFLSYPSLFKHLAFDGRFLHGVPEIMTRKYSSRRVDSRSRSQQYPMERHPDPEQGHGALEPGSSGRSATLASAEVDSAASCGQKRARGRMRVTLLVNVWLSHKPLEIAPLPQAIAAMLSRAPDLPVLNFDHPVMFSPVRLPVNDAVS 1392
+FW++++A+P LE +AK +F+FH A++ GY+ SGAEWW+Q R + FHWD+DE + T +P++ TVTYL+EHGAPT+VL+ +G E R + LS+P L KH+ FDGRFLHGVP ++R + R+T LVN+W+SH P + AP P+ +S F PV FS + L AV+
Sbjct: 129 SFWLAANAKPRFTLEALAKQIFEFHTADVK------------------------------------------GYDETRSGAEWWVQFRGTKSAHGKSIGFHWDRDEFYADRTDQNVHPQIGTVTYLSEHGAPTLVLDQSPIPKG---ESRDIHSGALSHPKLGKHICFDGRFLHGVPAELSRHLKEDQFT------------------------------------------------------RITFLVNIWISHIPTDTAPWPEEDVKSMS--------TFSLPVSFSQILLRSPTAVT 322
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Match: C1EIM3_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EIM3_MICCC) HSP 1 Score: 115 bits (289), Expect = 5.150e-24 Identity = 80/269 (29.74%), Postives = 116/269 (43.12%), Query Frame = 1
Query: 490 ETFWVSSDAQPTTALEKIAKAVFDFHVANLPVPTLLHRSSVLPGRDRDGNTPTSNSKAKNTGEASDGDNGKSPGYELAFSGAEWWIQIREEGYHSDLGMPFHWDKDERLRETTGVMKYPEVSTVTYLTEHGAPTMVLESCATEQGVVVE---GRLRRAFLSYPSLFKHLAFDGRFLHGVPEIMTRKYSSRRVDSRSRSQQYPMERHPDPEQGHGALEPGSSGRSATLASAEVDSAASCGQKRARGRMRVTLLVNVWLSHKPLEIAPLPQ 1287
E+FW+++ ++P ALE++A+ VF+ HVA + DG ++ A SGAEWW+Q+R E + FHWDKDE L + GV +P +STVTYLT GAPT+VL+ VE G + + +LS+P KH+AFDGR LHG P + + RH + +G RV+ LVN+WL+++P I P P+
Sbjct: 117 ESFWLAAGSEPRCALEELARKVFELHVAGI-----------------DGT------------------------WDAAKSGAEWWVQVRHEDDGQKEAVSFHWDKDEDLVDDFGVNVHPAISTVTYLTTSGAPTLVLDHVPPMMYEDVEQFRGPVGQGYLSFPKRGKHIAFDGRLLHGAPRELAKP------------------RHVE-----------------------------------KGYERVSFLVNIWLNYRPRAIEPFPE 291
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Match: A0A7S4QU38_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QU38_9STRA) HSP 1 Score: 111 bits (278), Expect = 7.970e-23 Identity = 84/291 (28.87%), Postives = 120/291 (41.24%), Query Frame = 1
Query: 493 TFWVSSDAQPTTALEKIAKAVFDFHVANLPVPTLLHRSSVLPGRDRDGNTPTSNSKAKNTGEASDGDNGKSPGYELAFS---GAEWWIQIR---------EEGYHSDLGMPFHWDKDERLRETTGVMKYPEVSTVTYLTEHGAPTMVLESCATEQGVVVEGR---LRRAFLSYPSLFKHLAFDGRFLHGVPEIMTRKYSSRRVDSRSRSQQYPMERHPDPEQGHGALEPGSSGRSATLASAEVDSAASCGQKRARGRMRVTLLVNVWLSHKPLEIAPLPQAIAAMLSRAPD 1320
TFW+S+ +P LEK+AK +F H + + N + +K + G+ + FS G EWW+Q+R + G+ FHWDKDE LR+ V +P +STVTYLT++GAPT+V E + ++ + ++ AF+S+P KHL+FDGR LHG P + R S+E D +RVT LVN+WL HKPL I P+A S D
Sbjct: 66 TFWLSARDEPRCLLEKLAKDIFAHHAVVV----------------MNNNKGSKRAKNHHLGD-------------MEFSNACGCEWWVQLRPSPNQKRINSNSKEAQRGIQFHWDKDETLRDVADVFVHPHLSTVTYLTDNGAPTLVFEESMPNERLLDKTAGTGIKGAFVSWPLRGKHLSFDGRLLHGAPSDLLR-------------------------------------------SSETD------------ELRVTFLVNIWLYHKPLGIEKFPEAFLGRFSCVDD 272
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Match: A0A7S3Z950_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z950_9EUKA) HSP 1 Score: 112 bits (279), Expect = 8.000e-23 Identity = 100/335 (29.85%), Postives = 150/335 (44.78%), Query Frame = 1
Query: 307 NERDYASVRDDSTNTITGSKLPAVQFDTCCFEKLLPLDVNNDSLERTLRRD------AELIDVPDE---AETFWVSSDAQPTTALEKIAKAVFDFHVANLPVPTLLHRSSVLPGRDRDGNTPTSNSKAKNTGEASDGDNGKSPGYELAFSGAEWWIQIREEGYHSDLGMPFHWDKDERLRETTGVMKYPEVSTVTYLTEHGAPTMVLESCATEQ--GVVVEGRLRRAFLSYPSLFKHLAFDGRFLHGVPEIMTRKYSSRRVDSRSRSQQYPME-----RHPDPEQGHGALEPGSSGRSATLASAEVDSAASCGQKRARGRMRVTLLVNVWLSHKP 1263
++ ++ V D I G + +D FE + D SL ++RD A+ D E TFW++S+ +P LE+IAKA+F+ H TG +DG +P SGAE+W E G + +HWDKD E+ G+ +P V+TVTYLT+ GAPTM LE G + G +++ +LS+P + KH++FDGR+LHG P+ +T +S DSR +++ + R+P + H A + R +T V R+T LVNVWL+HKP
Sbjct: 6 SDDEHVEVCLDEHGRIGGFSSCGISYDFRAFEAINRSDA---SLISKIKRDCVKSFSAQSSDSSGEYSAGHTFWIASNDKPKCLLEQIAKAIFEQH----------------------------------TGAVTDGSKNHTP-LIAETSGAEFWSLCMESGD----AVGWHWDKDYAT-ESDGLNIHPHVATVTYLTDVGAPTMFLEKTVGSPIVGHSIAGPIKKGYLSWPQVGKHVSFDGRWLHGAPDELTDAFSRSNEDSRDSAEKEDTKSAKKRRNPPRSKKHQAKK----SRKSTARLTSVP-------------QRITFLVNVWLNHKP 280 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1721.4019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1721.4019.1 >prot_H-paniculata_contig1721.4019.1 ID=prot_H-paniculata_contig1721.4019.1|Name=mRNA_H-paniculata_contig1721.4019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=506bp MNERDYASVRDDSTNTITGSKLPAVQFDTCCFEKLLPLDVNNDSLERTLRback to top mRNA from alignment at H-paniculata_contig1721:12110..15968- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1721.4019.1 ID=mRNA_H-paniculata_contig1721.4019.1|Name=mRNA_H-paniculata_contig1721.4019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3859bp|location=Sequence derived from alignment at H-paniculata_contig1721:12110..15968- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1721:12110..15968- >mRNA_H-paniculata_contig1721.4019.1 ID=mRNA_H-paniculata_contig1721.4019.1|Name=mRNA_H-paniculata_contig1721.4019.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3036bp|location=Sequence derived from alignment at H-paniculata_contig1721:12110..15968- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |