prot_H-paniculata_contig1062.400.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1062.400.1
Unique Nameprot_H-paniculata_contig1062.400.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length326
Homology
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: D8LGP2_ECTSI (LIP1, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP2_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.060e-41
Identity = 100/239 (41.84%), Postives = 133/239 (55.65%), Query Frame = 0
Query:   11 EPNHARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLPGECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDLTSAGIDVGASRMPHEEREFDFMAKLLSSLKRDDAKSASSIPELMA------LLPGASDTDLEGCAGTVPVRFVGTRRDVLAPSPRGGEDVQAEFSVPRTPHIWVSAPNLNKGDEEHFHKFFEDVFRYHAAV 243
            +P+HARVLVVGPM AGKT+LV+S C         G   PT+GC+VDVKLL G   +RSIEFWD+GG PDAA AR MF E    AGVLLV+D+S  RS R+LR W+ +L SAGI +   +  +  R     +    SL+    +S    P+  +      L  G S T   G  G VP+  VG + D      R G  + +E  V    H+ V A  L+  +E  F +FF +VFR+H+ +
Sbjct:   10 DPHHARVLVVGPMAAGKTTLVHSFCHGGGGNGVPGNTLPTVGCSVDVKLLAGGHPNRSIEFWDVGGSPDAALARGMFFEGCEAAGVLLVYDVSIPRSLRDLRVWVAELDSAGISI-LGKSGNNGRSSATASSSGRSLR--SGRSTEYPPDFFSEGLAADLEGGGSGTAAVG-GGRVPLIVVGAKADTGEGVRREGGALASELGVG---HVAVCASKLSNEEEALFDRFFGEVFRHHSGL 241          
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A6H5JCT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT8_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 5.680e-36
Identity = 86/196 (43.88%), Postives = 106/196 (54.08%), Query Frame = 0
Query:   11 EPNHARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLPGECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDLTSAGIDV-GASRMPHEEREFDFMAKLLSSLKRDDAKSASSIPELMALLPGASDTDLEGCAGTVPVRFVGTRRDVLAPSPRGGEDVQAE 205
            +P+HAR+LVVGPM AGKT+LV+S C         G   PT+GC+VDVKLL G   +RSIEFWD+GG PDAA AR MF E    AGVLLV+D+S  RS R+LR W+ +L SAGI V G S            A    SL+  +         L A L G          G +P+  VG + D        GE V+ E
Sbjct:   10 DPHHARILVVGPMAAGKTTLVHSFCHGGVGNGVPGNRLPTVGCSVDVKLLAGGHPNRSIEFWDVGGRPDAALARGMFFEGCEAAGVLLVYDVSTPRSLRDLRVWVAELDSAGISVLGES---DNNGRSSATAPYARSLRSTEHPPYFFSEGLTADLEGGGSGTAAVGGGRIPLMVVGAKADT-------GEGVRRE 195          
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A0D2VT79_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VT79_CAPO3)

HSP 1 Score: 89.7 bits (221), Expect = 7.930e-17
Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = 0
Query:   13 NHARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLPGECVDRS--IEFWDIGGHPDAAPARRMFVEDSS-IAGVLLVFDLSNTRSARELRAWIKD-LTSAGIDVGASRMPH 132
            +  RVLV+G  G GKTSLV+ +CR +  R     P  T+GC++DVKL   EC  R+  IEFWD+GG       R++  + ++ IAG++LV+DLSN +S   LR W+ + L  A   V +S  PH
Sbjct:    3 DRVRVLVLGDSGVGKTSLVSLICRNEVLRS----PSWTVGCSIDVKLH--ECNGRTFCIEFWDVGGAAKYERTRQLLYDPANDIAGIVLVYDLSNNKSYTNLRRWLSEFLAGASAAVLSSPQPH 120          
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A7S2RJ66_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RJ66_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.750e-14
Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = 0
Query:   15 ARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLP--GECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDL 118
            ARVLVVG  G GKTSLV+ LC Y +    L  P  T+GCNV+VK  P  G+     ++F D+G H + + +R +F   + I GV+LV+D+SN++S   L+ WI +L
Sbjct:   25 ARVLVVGDSGVGKTSLVHKLC-YGEV---LNNPEWTVGCNVEVKYCPTDGDVPAGFVDFLDVGCHNNHSMSRSIFY--NGIDGVILVYDMSNSKSFTNLKKWIAEL 124          
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A024GTP2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTP2_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.410e-14
Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 0
Query:   16 RVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLP-----GECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDL-----TSAGIDVGASRMPH--EEREFDFMAKLLSSLKRDDAKSASSIPELMALLP 166
            R+LVVG  GAGKT+L+  LC   ++     P   T GC   V +       GE  +  IEF D+ GHP    +R++F     + G++LV DLSNT+S R LR W++++     T+ G+ V A+   H  ++  F  M KL+ + K+D   + +  P     LP
Sbjct:   19 RILVVGDSGAGKTTLLKKLCNVSEDVM-AHPHHWTTGCEQHVLMHTHTNQRGEHFNYFIEFVDVSGHPTYKQSRKVFYH--GVHGIILVQDLSNTKSYRHLRDWLREIASEQQTNGGV-VAATYSQHANDKSLFAAMPKLILANKKDRIGAPTKRPATYNDLP 177          
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A7S2RI26_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RI26_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.670e-14
Identity = 47/106 (44.34%), Postives = 67/106 (63.21%), Query Frame = 0
Query:   15 ARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLP--GECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDL 118
            ARVLVVG  G GKTSLV+ LC Y +    L  P  T+GCNV+VK  P  G+     ++F D+G H + + +R +F   + I GV+LV+D+SN++S   L+ WI +L
Sbjct:   25 ARVLVVGDSGVGKTSLVHKLC-YGEV---LNNPEWTVGCNVEVKYCPTDGDVPAGFVDFLDVGCHNNHSMSRSIFY--NGIDGVILVYDMSNSKSFTNLKKWIAEL 124          
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: UPI0008707EDC (rab-like protein 3 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0008707EDC)

HSP 1 Score: 80.1 bits (196), Expect = 6.830e-14
Identity = 48/111 (43.24%), Postives = 69/111 (62.16%), Query Frame = 0
Query:   16 RVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRP-TIGCNVDVKL---LPGECVDRS--IEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDLTS 120
            +VLV+G  G GK++ VN +C  K   +     RP TIGCNV+VKL    PG    R+  +E W+IGG+   A ARR+F +  S+ GV+LV+DL+N++S   L+ W+ D  S
Sbjct:   20 KVLVLGDSGVGKSAAVNLICTGKPANR----ARPSTIGCNVEVKLHDYKPGTNSQRTFFVELWEIGGNAGHAQARRVFYK--SVHGVILVYDLTNSKSHDNLKMWLADAFS 124          
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A024GT29_9STRA (PAS_3 domain-containing protein n=5 Tax=Albugo candida TaxID=65357 RepID=A0A024GT29_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 8.630e-13
Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 0
Query:   16 RVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKLLP-----GECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKDL-----TSAGIDVGASRMPH--EEREFDFMAKLLSSLKRDDAKSASSIPELMALLP 166
            R+LVVG  GAGKT+L+  LC   ++     P   T GC   V +       GE  +  IEF D+ GHP    +R++F     + G++LV DLSNT+S R LR W++++     T+ G+ V A+   H  ++  F  M KL+ + K+D   + +  P     LP
Sbjct:  447 RILVVGDSGAGKTTLLKKLCNVSEDVM-AHPHHWTTGCEQHVLMHTHTNQRGEHFNYFIEFVDVSGHPTYKQSRKVFYH--GVHGIILVQDLSNTKSYRHLRDWLREIASEQQTNGGV-VAATYSQHANDKSLFAAMPKLILANKKDRIGAPTKRPATYNDLP 605          
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: A0A1V9XBT1_9ACAR (Uncharacterized protein n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XBT1_9ACAR)

HSP 1 Score: 77.0 bits (188), Expect = 2.850e-12
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0
Query:   16 RVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKL---LPGECVDRS--IEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKD 117
            +VLV+G  G GK+S+V  +C  K   + L     TIGCNV+VKL     G    R   +EFW+IGG+   A ARR+F   +S+ G++LV DL+N++S   LR W+ D
Sbjct:   10 KVLVLGDSGVGKSSVVQLICSGKPAAKSLAS---TIGCNVEVKLHEYKQGTDQQRIFFVEFWEIGGNTGHANARRVFY--NSVHGIVLVHDLTNSKSHDHLRMWLAD 111          
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Match: UPI000BF828A6 (rab-like protein 3 isoform X1 n=1 Tax=Varroa jacobsoni TaxID=62625 RepID=UPI000BF828A6)

HSP 1 Score: 75.9 bits (185), Expect = 3.400e-12
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 0
Query:   16 RVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPTIGCNVDVKL---LPGECVDRS--IEFWDIGGHPDAAPARRMFVEDSSIAGVLLVFDLSNTRSARELRAWIKD 117
            +VLV+G  G GK+S+V  +C  +   + L     TIGCNV+VKL     G    R+  +EFW+IGG+   A ARR+F   +S+ G++LV DL+N++S   L+ W+ D
Sbjct:   10 KVLVLGDSGVGKSSVVQLICSGRPAARSLAS---TIGCNVEVKLHEYRQGTDQQRTFFVEFWEIGGNTGHANARRVFY--NSVHGIVLVHDLTNSKSHDHLKMWLAD 111          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1062.400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGP2_ECTSI1.060e-4141.84LIP1, Ras superfamily GTPase n=1 Tax=Ectocarpus si... [more]
A0A6H5JCT8_9PHAE5.680e-3643.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0D2VT79_CAPO37.930e-1742.74Uncharacterized protein n=2 Tax=Capsaspora owczarz... [more]
A0A7S2RJ66_9STRA1.750e-1444.34Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A024GTP2_9STRA4.410e-1434.36Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A7S2RI26_9STRA6.670e-1444.34Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
UPI0008707EDC6.830e-1443.24rab-like protein 3 n=1 Tax=Galendromus occidentali... [more]
A0A024GT29_9STRA8.630e-1334.36PAS_3 domain-containing protein n=5 Tax=Albugo can... [more]
A0A1V9XBT1_9ACAR2.850e-1242.99Uncharacterized protein n=1 Tax=Tropilaelaps merce... [more]
UPI000BF828A63.400e-1241.12rab-like protein 3 isoform X1 n=1 Tax=Varroa jacob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF08477Roccoord: 16..120
e-value: 3.8E-11
score: 43.2
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 15..236
NoneNo IPR availablePANTHERPTHR24073:SF128RAB-LIKE PROTEIN 3coord: 15..236
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1062contigH-paniculata_contig1062:17812..26779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1062.400.1mRNA_H-paniculata_contig1062.400.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1062 17812..26854 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1062.400.1 ID=prot_H-paniculata_contig1062.400.1|Name=mRNA_H-paniculata_contig1062.400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
MEYNAAPLLTEPNHARVLVVGPMGAGKTSLVNSLCRYKQERQHLGPPRPT
IGCNVDVKLLPGECVDRSIEFWDIGGHPDAAPARRMFVEDSSIAGVLLVF
DLSNTRSARELRAWIKDLTSAGIDVGASRMPHEEREFDFMAKLLSSLKRD
DAKSASSIPELMALLPGASDTDLEGCAGTVPVRFVGTRRDVLAPSPRGGE
DVQAEFSVPRTPHIWVSAPNLNKGDEEHFHKFFEDVFRYHAAVVGSCEGS
RAGRTEAWASPASTAGSATAFTSARRAEAFDPPRLANRRSRPHHAEARVP
ESGNLETFVGGWELGTEGKSWGGGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase