prot_H-paniculata_contig17184.4004.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig17184.4004.1
Unique Name	prot_H-paniculata_contig17184.4004.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	93

Homology

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BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Match: A0A6H5KM67_9PHAE (Histidine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM67_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 1.430e-46
Identity = 83/91 (91.21%), Postives = 87/91 (95.60%), Query Frame = 0

Query:    1 MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRNR 91
            MRVREQ FTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLA++ VGNIKRFHIAKV  R++
Sbjct:  241 MRVREQAFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLALHGVGNIKRFHIAKVYRRDQ 331

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BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Match: D7G588_ECTSI (Histidyl-tRNA Synthetase Similar to Histidine Ammonia-Lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G588_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 4.180e-46
Identity = 83/91 (91.21%), Postives = 87/91 (95.60%), Query Frame = 0

Query:    1 MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRNR 91
            MRVREQ FTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLA++ VGNIKRFHIAKV  R++
Sbjct:  517 MRVREQAFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLALHGVGNIKRFHIAKVYRRDQ 607

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BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Match: A0A835Z9D3_9STRA (AA_TRNA_LIGASE_II domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D3_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.500e-45
Identity = 82/91 (90.11%), Postives = 86/91 (94.51%), Query Frame = 0

Query:    1 MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRNR 91
            MRVREQ F AIR VFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLA+N+VGNIKRFHIAKV  R++
Sbjct:  522 MRVREQAFEAIRRVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLALNSVGNIKRFHIAKVYRRDQ 612

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BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Match: B8CDX2_THAPS (Histidine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDX2_THAPS)

HSP 1 Score: 159 bits (401), Expect = 9.260e-45
Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 0

Query:    1 MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRNR 91
            M +R++ FT IR VFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFAR+LAVNAVGNIKRFHI KV  R++
Sbjct:   19 MSIRDKAFTIIRRVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARFLAVNAVGNIKRFHIGKVYRRDQ 109

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BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Match: A0A7S2LH49_9STRA (Histidine--tRNA ligase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LH49_9STRA)

HSP 1 Score: 159 bits (401), Expect = 3.230e-43
Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 0

Query:    1 MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRNR 91
            M +R++ FT IR VFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFAR+LAVNAVGNIKRFHI KV  R++
Sbjct:  491 MAIRDKAFTIIRRVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARFLAVNAVGNIKRFHIGKVYRRDQ 581

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BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Match: A0A8B9C8J7_9AVES (AA_TRNA_LIGASE_II domain-containing protein n=2 Tax=Anatidae TaxID=8830 RepID=A0A8B9C8J7_9AVES)

HSP 1 Score: 146 bits (368), Expect = 4.480e-43
Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRN 90
            M +RE+VF+AI N FKRHGA  IDTPVFELKETLTGKYGEDSKLIYDL DQGGELL+LRYDLTVPFARYLA+N + NIKR+HIAKV  R+
Sbjct:    1 MAIRERVFSAIINCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRD 90

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BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Match: A0A7S1UVS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UVS9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.190e-42
Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 0

Query:    1 MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRNR 91
            MR+R+Q F  IR VF+ HGAVEIDTPVFELK+TLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFAR+LA+N+VGNIKR+HI KV  R++
Sbjct:  239 MRIRQQAFDIIRRVFQSHGAVEIDTPVFELKDTLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARFLALNSVGNIKRYHIGKVYRRDQ 329

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BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Match: A0A7S1B383_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B383_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.740e-42
Identity = 73/91 (80.22%), Postives = 82/91 (90.11%), Query Frame = 0

Query:    1 MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRNR 91
            M +R+Q F  IR VF+RHGAVEIDTPVFELKETLTGKYGEDSKLIY+LADQGGELLALRYDLTVP AR+LA+N+VGNIKRFHI KV  R++
Sbjct:   21 MMIRDQAFQIIRRVFRRHGAVEIDTPVFELKETLTGKYGEDSKLIYNLADQGGELLALRYDLTVPLARFLALNSVGNIKRFHIGKVYRRDQ 111

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BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Match: K0RV05_THAOC (Histidine--tRNA ligase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RV05_THAOC)

HSP 1 Score: 155 bits (393), Expect = 3.360e-42
Identity = 76/91 (83.52%), Postives = 83/91 (91.21%), Query Frame = 0

Query:    1 MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRNR 91
            M +R+Q F+ IR VF RHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGE+LALRYDLTVPFAR+LAVN+VGNIKRFHI KV  R+R
Sbjct:  387 MAIRQQAFSIIRRVFLRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGEMLALRYDLTVPFARFLAVNSVGNIKRFHIGKVYRRDR 477

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BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Match: A0A7S2RAZ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RAZ5_9STRA)

HSP 1 Score: 150 bits (380), Expect = 4.970e-42
Identity = 73/91 (80.22%), Postives = 82/91 (90.11%), Query Frame = 0

Query:    1 MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRNR 91
            M +R++ FT IR VF+ HGAVEIDTPVFELK+TLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFAR+LA+N VGNIKRFHI KV  R++
Sbjct:  260 MMIRDKAFTIIRRVFRSHGAVEIDTPVFELKDTLTGKYGEDSKLIYDLADQGGELLALRYDLTVPFARFLALNNVGNIKRFHIGKVYRRDQ 350

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig17184.4004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KM67_9PHAE	1.430e-46	91.21	Histidine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP...	[more]
D7G588_ECTSI	4.180e-46	91.21	Histidyl-tRNA Synthetase Similar to Histidine Ammo...	[more]
A0A835Z9D3_9STRA	2.500e-45	90.11	AA_TRNA_LIGASE_II domain-containing protein (Fragm...	[more]
B8CDX2_THAPS	9.260e-45	85.71	Histidine--tRNA ligase n=1 Tax=Thalassiosira pseud...	[more]
A0A7S2LH49_9STRA	3.230e-43	85.71	Histidine--tRNA ligase n=1 Tax=Skeletonema marinoi...	[more]
A0A8B9C8J7_9AVES	4.480e-43	80.00	AA_TRNA_LIGASE_II domain-containing protein n=2 Ta...	[more]
A0A7S1UVS9_9STRA	1.190e-42	80.22	Hypothetical protein (Fragment) n=1 Tax=Grammatoph...	[more]
A0A7S1B383_9STRA	1.740e-42	80.22	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
K0RV05_THAOC	3.360e-42	83.52	Histidine--tRNA ligase (Fragment) n=1 Tax=Thalassi...	[more]
A0A7S2RAZ5_9STRA	4.970e-42	80.22	Hypothetical protein (Fragment) n=1 Tax=Eucampia a...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041715	Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain	PFAM	PF13393	tRNA-synt_His	coord: 3..73 e-value: 7.3E-12 score: 45.2
None	No IPR available	GENE3D	3.30.930.10		coord: 1..92 e-value: 1.1E-37 score: 131.6
None	No IPR available	PANTHER	PTHR11476:SF7	HISTIDYL-TRNA SYNTHETASE	coord: 1..91
None	No IPR available	PANTHER	PTHR11476	HISTIDYL-TRNA SYNTHETASE	coord: 1..91
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 1..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig17184	contig	H-paniculata_contig17184:1135..1963 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig17184.4004.1	mRNA_H-paniculata_contig17184.4004.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig17184 1135..1966 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig17184.4004.1 ID=prot_H-paniculata_contig17184.4004.1|Name=mRNA_H-paniculata_contig17184.4004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
MRVREQVFTAIRNVFKRHGAVEIDTPVFELKETLTGKYGEDSKLIYDLAD
QGGELLALRYDLTVPFARYLAVNAVGNIKRFHIAKVGDRNRA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR041715	HisRS-like_core