prot_H-paniculata_contig1718.4002.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1718.4002.1
Unique Nameprot_H-paniculata_contig1718.4002.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length615
Homology
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BLAST of mRNA_H-paniculata_contig1718.4002.1 vs. uniprot
Match: A0A6H5K945_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K945_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.180e-12
Identity = 63/192 (32.81%), Postives = 84/192 (43.75%), Query Frame = 0 
Query:  111 MGLEGKWTVEENEGS-----ATPTRTSALPGQLPMVTDDGQSWGEWAREWKRDPARKAVRLVKKWEADAKREGRLDDKQDISESAGFGDSKQTRRK-NRNKQKSAGLPXXXXXXXXXXXXXXXXXXXHLVVSEEGNGRSGGGEVDWSKGTPLVENKERDFAAQWQGEADRVSNLNPSEREKLAQNLRKALGK 296
            MGL+G+W V+  EG      A      ++PGQLP  T DGQ W EWAREW+ DP  KA RLV +W+A+AK           +E  G  D +  +RK  +NK+  AG                       +V  E                              Q +A  + +L+PS+REKLA+ LR ALGK
Sbjct:  107 MGLDGEWQVKSGEGKRARRGAGSDGFGSVPGQLPEKTRDGQDWAEWAREWREDPEGKADRLVSQWDAEAK----------ANEGGGLQDGRSKKRKAKKNKKGKAGPSRGVVGSGFGGPVRQTKSVPKGLVVSETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAKNLESLDPSDREKLAEQLRTALGK 288
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1718.4002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K945_9PHAE1.180e-1232.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..614
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..30
NoneNo IPR availableTMHMMTMhelixcoord: 16..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1718contigH-paniculata_contig1718:2766..9657 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1718.4002.1mRNA_H-paniculata_contig1718.4002.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1718 2436..9675 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1718.4002.1 ID=prot_H-paniculata_contig1718.4002.1|Name=mRNA_H-paniculata_contig1718.4002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=615bp
MARREACRSSQLPRHLLILSLLFLSSTSLSTGFLLFGGCAVCRHHVVASN
PRADDAIALATEKRRLRSRVRLLLTAEDENGIAGEGELAAAATEAEAGAE
TEGQRNAPSEMGLEGKWTVEENEGSATPTRTSALPGQLPMVTDDGQSWGE
WAREWKRDPARKAVRLVKKWEADAKREGRLDDKQDISESAGFGDSKQTRR
KNRNKQKSAGLPSRGFGDSARGGRATKGAPKHLVVSEEGNGRSGGGEVDW
SKGTPLVENKERDFAAQWQGEADRVSNLNPSEREKLAQNLRKALGKGSTD
NTTSKSSRKMDTDGGRASVVVSDDKGFGGGGSRKRGTKGTRRAQQRGGSA
ASVTAESMAIPVVAASHDPVVVPIGGAGTADDAKLAAAMGAATAARIKEG
RGGDQNTKSSTDIGQEAGALSLSEGSFDCEGSSAVKLGEGGDDNMNASGK
HETPKNSGGNDDDDDELARLRNLFGSSVKVTKPSFGERHAANSSIESGAP
LQGSEGGVENGKIIDGRPSATDVGVTAGVGNEKMSQSSVATGSGEVNEDE
DELKRLRVFGRGVSVSVKNASSFEGKIIQEGSADEEEQRLRSFGRASARV
VIDSDSGGAVDGTS*
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