prot_H-paniculata_contig1717.3998.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1717.3998.1
Unique Nameprot_H-paniculata_contig1717.3998.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length243
Homology
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BLAST of mRNA_H-paniculata_contig1717.3998.1 vs. uniprot
Match: D8LEB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEB0_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 8.160e-66
Identity = 107/168 (63.69%), Postives = 135/168 (80.36%), Query Frame = 0 
Query:   74 EDWDPLSTEKMRAVTAGQGEFLAKRGFAGGLVSHFLRETDVEFKALQGGSSRGMNEAQIQEAELRFTEVFLPAVKGLKRHGSMDVVLDSLFEGEDNAGEFVVRFEVTITRCHPEDLEATSARAIRECAPAIRSAVTHEGVAPGDTHEVVFVGRPMWELVPPVWNFSNR 241
            E+   ++ E+MRA+T+GQGEFLA+RGFA GLVSHFL ET+ EF+ LQGG+S GMN  Q+++A  R  EVF+PAVK L+   S+DVVLDSLF+G D+AG+FVVRFEVT+TRCHPED++++ A A+RECA AI+ AV  EGV   DTHEVVFVGRPMWELV PV + S +
Sbjct:  304 EEGGQVAAERMRALTSGQGEFLARRGFAAGLVSHFLEETNCEFRVLQGGASCGMNAQQLEDAAARLEEVFVPAVKRLRARSSVDVVLDSLFQGADDAGDFVVRFEVTLTRCHPEDIDSSPAPALRECASAIKEAVRDEGVNDKDTHEVVFVGRPMWELVSPVLDLSAK 471
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1717.3998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEB0_ECTSI8.160e-6663.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.40coord: 54..225
e-value: 5.0E-6
score: 27.9
NoneNo IPR availableGENE3D3.90.640.10coord: 96..193
e-value: 5.0E-6
score: 27.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1717contigH-paniculata_contig1717:887..5142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1717.3998.1mRNA_H-paniculata_contig1717.3998.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1717 632..5321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1717.3998.1 ID=prot_H-paniculata_contig1717.3998.1|Name=mRNA_H-paniculata_contig1717.3998.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=243bp
MEMLEEEIDLSSAFRSNNDNNAAAAGSRECDPRGPMRATCDDCSGGQLRL
VYDVLVVDRGCGKCDTSLVPLTMEDWDPLSTEKMRAVTAGQGEFLAKRGF
AGGLVSHFLRETDVEFKALQGGSSRGMNEAQIQEAELRFTEVFLPAVKGL
KRHGSMDVVLDSLFEGEDNAGEFVVRFEVTITRCHPEDLEATSARAIREC
APAIRSAVTHEGVAPGDTHEVVFVGRPMWELVPPVWNFSNRR*
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