prot_H-paniculata_contig17166.3996.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17166.3996.1
Unique Nameprot_H-paniculata_contig17166.3996.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length203
Homology
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 157 bits (398), Expect = 5.940e-44
Identity = 75/187 (40.11%), Postives = 117/187 (62.57%), Query Frame = 0
Query:    3 NLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVE-GKVKISAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHDLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIA 188
            ++G +  VLG+ +RRDR  G +TISQ +Y + +LKR+G ++C+ V TP+E GK      D     N+ EY+ ++    Y +  TRPD+A AV   ++ M  PS+  +   KR+ RY+    + G+ F GKS    L  + D DWA D++ R+ST+GY+F++NG  +SWCS++Q  V  S+T+AEY+A
Sbjct:   17 DMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDENPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVA 203          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A6S7KSC5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KSC5_PARCT)

HSP 1 Score: 155 bits (392), Expect = 1.370e-43
Identity = 81/189 (42.86%), Postives = 116/189 (61.38%), Query Frame = 0
Query:    1 MKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVE-GKVKISAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHDLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIA 188
            +++LG +S +LG+ ++RDR + T+TISQ  Y   VLKR+  +EC+ V TP+E GK     +D     N  EY+ ++    Y +  TRPD+A AV   ++ M  PS+  +   KRI RY+    + GITF  K     L  + D DWA D E R+ST+GYIF+++G  ISWCS+KQ  V  SST+AEY+A
Sbjct:   55 VEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDETPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMA 243          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177VUP4_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VUP4_9BASI)

HSP 1 Score: 159 bits (403), Expect = 1.950e-43
Identity = 81/199 (40.70%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    3 NLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKISAADRGKS-GNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGH-DLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 199
            +LG     LGI + R+  +GTIT+ Q  Y +EVL R+G  EC    TP++ K  +  A  G++  +  +++ +V    Y +  TRPD+AYAV    R   DP+        R+ RYL       +TFGG+ +G+  LE FVD DWA D +DR+ST+G++F + GGA+SW SRKQ  V  S+ +AEY+AAG  GR   +L
Sbjct:  135 DLGPAHHCLGIRISRNWEDGTITLDQERYAKEVLARFGMSECNAAKTPMDQKANLRKATDGEARADKKKFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRVAANRVLRYLKRTSGAKLTFGGQKDGNISLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGRESLML 333          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177T2R9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177T2R9_9BASI)

HSP 1 Score: 155 bits (392), Expect = 5.420e-43
Identity = 80/199 (40.20%), Postives = 114/199 (57.29%), Query Frame = 0
Query:    3 NLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKISAADRGKS-GNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGH-DLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 199
            +LG     LGI + R    GTIT+ Q  Y +EVL R+G  +C    TP++ K  +  A  G++  +  E++ +V    Y +  TRPD+AYAV    R   DP+        R+ RYL       +TFGG+ +G+  L  FVD DWA D +DR+ST+G++F + GGA+SW SRKQ  V  S+ +AEY+AAG  GR   +L
Sbjct:   34 DLGPAHHCLGIRISRSWEEGTITLDQERYAKEVLARFGMSDCNPAKTPMDQKASLRKAVDGEARADKKEFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRIAANRVLRYLKRTSGATLTFGGQKDGNVSLAGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREALML 232          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177V816_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia caries TaxID=13290 RepID=A0A177V816_9BASI)

HSP 1 Score: 161 bits (407), Expect = 2.870e-42
Identity = 82/199 (41.21%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    3 NLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKISAADRGKS-GNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGH-DLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 199
            +LG     LGI + R+  +GTIT+ Q  Y +EVL R+G  EC    TP++ K  +  A  G++  +  E++ +V    Y +  TRPD+AYAV    R   DP+        R+ RYL       +TFGG+ +G+  LE FVD DWA D +DR+ST+G++F + GGA+SW SRKQ  V  S+ +AEY+AAG  GR   +L
Sbjct:  540 DLGPAHHCLGIRISRNWEDGTITLDQERYAKEVLARFGMSECNAAKTPMDQKANLRKATDGEARADKKEFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRVAANRVLRYLKRTSGAKLTFGGQKDGNISLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGRESLML 738          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177VLY9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VLY9_9BASI)

HSP 1 Score: 159 bits (401), Expect = 1.860e-41
Identity = 82/199 (41.21%), Postives = 115/199 (57.79%), Query Frame = 0
Query:    3 NLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKI-SAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGH-DLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 199
            +LG     LGI + R+    TIT+ Q  Y +EVL R+G  +C    TP++ K  +  AAD     +  EY+ +V    Y +  TRPD+AYAV    R   DP+    +   R+ RYL       +TFGG  +G+ +LE FVD DWA D +DR+ST+G++F + GGA+SW SRKQ  V  S+ +AEY+AAG  GR   +L
Sbjct:  535 DLGPAHHCLGIRINRNWDEDTITLDQERYAKEVLARFGMSDCNPARTPMDQKTSLRKAADGEARADKREYQAIVGCLAYLAQGTRPDLAYAVSTLGRYGSDPTETHRTAANRVLRYLKRTSSAKLTFGGSRDGNVNLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVAGREALML 733          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177VM55_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177VM55_9BASI)

HSP 1 Score: 158 bits (399), Expect = 4.440e-41
Identity = 82/199 (41.21%), Postives = 114/199 (57.29%), Query Frame = 0
Query:    3 NLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKI-SAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGH-DLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 199
            +LG     LGI + R+  NGTIT+ Q  Y +EVL R+G  EC    TP++ K  +  A D     +  E++ +V    Y +  TRPD+AYAV    R   DP+        R+ RYL       +TFG + +G+  LE FVD DWA D +DR+ST+G++F + GGA+SW SRKQ  V  S+ +AEY+AAG  GR   +L
Sbjct: 1188 DLGPAHHCLGIRISRNWENGTITLDQERYAKEVLSRFGMTECNPAKTPMDQKASLRKATDDETRADKREFQAIVGCLAYLAQGTRPDLAYAVSTLGRFSSDPTETHRIAANRVLRYLKRTSGAKLTFGEQKDGNVSLEGFVDSDWAADRDDRRSTSGFVFTVGGGAVSWGSRKQGAVALSTAEAEYVAAGVVGRESLML 1386          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 156 bits (395), Expect = 1.510e-40
Identity = 81/189 (42.86%), Postives = 117/189 (61.90%), Query Frame = 0
Query:    1 MKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVE-GKVKISAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHDLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIA 188
            +++LG +S +LG+ ++RDR + T+TISQ  Y   VLKR+  +EC+ V TP+E GK     +D  +  N  EY+ ++    Y +  TRPD+A AV   ++ M  PS+  +   KRI RY+    + GITF  K     L  + D DWA D E R+ST+GYIF+++G  ISWCS+KQ  V  SST+AEY+A
Sbjct: 1061 VEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMA 1249          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: H3GBA2_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBA2_PHYRM)

HSP 1 Score: 152 bits (384), Expect = 3.010e-40
Identity = 78/195 (40.00%), Postives = 121/195 (62.05%), Query Frame = 0
Query:    1 MKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKISAADRG-KSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHD---LEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGE 191
            +K+ G L++ LG+E+  ++ + +I ISQG Y RE+L+++G+ +   V  P+E  V+++  +   KS  S  YR  +   MY +  TRPD+A+ + Q +R + +PS       KR+ RYL+   D GIT+  K +  D   LE + D DWA D E RKSTTG++F L GGAI+W SR+Q ++  S+ +AEY+AA E
Sbjct:  203 LKDQGRLTQYLGVEI--EQTHESIKISQGKYAREILEKFGYQDAHAVGNPMETNVRLAPLETDEKSETSFPYREAIGMLMYLATSTRPDLAFTLGQLSRFVANPSAKHVGAVKRVLRYLAGTVDYGITYARKQDEVDEVVLEGYSDSDWANDPEQRKSTTGFVFTLAGGAITWMSRRQSIIALSTAEAEYVAACE 395          
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Match: A0A177V4F2_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia walkeri TaxID=117179 RepID=A0A177V4F2_9BASI)

HSP 1 Score: 148 bits (374), Expect = 3.460e-40
Identity = 79/199 (39.70%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    2 KNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTPVEGKVKISAADRGKSGNSTE-YRGMVRSFMYASARTRPDIAYAVHQAARRMGDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHDLEEFVDDDWAEDVEDRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYIL 199
            K+LG    +LGIE++R+R   T+T+ QG Y REVL+R+G   C+   TP+E K+ ++    G+     + YR +V S M+ +  TR D  +      R + DPS  + +  KR+ R L    D  +TF G +NG  +  FVD DWA D  DRKST+G+   + GGA++W ++KQ  V +S+T+AEY+AAG  GR    L
Sbjct:   54 KDLGDAHHLLGIEIKRNREKRTLTMFQGRYAREVLERFGMSNCKPARTPMETKISLTPRAEGEEKADAQLYRAIVGSLMWLAMGTRVDYGFRDGFLGRFVSDPSVKNLTAAKRVLRDLKGTLDAELTFDG-TNGLRIAAFVDADWAGDKADRKSTSGFAIMMAGGAVTWGAKKQTAVAFSTTEAEYVAAGLAGRETIAL 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17166.3996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9D5L2_PARCT5.940e-4440.11Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A6S7KSC5_PARCT1.370e-4342.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VUP4_9BASI1.950e-4340.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177T2R9_9BASI5.420e-4340.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177V816_9BASI2.870e-4241.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VLY9_9BASI1.860e-4141.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VM55_9BASI4.440e-4141.21Integrase catalytic domain-containing protein n=1 ... [more]
A0A7D9IUY0_PARCT1.510e-4042.86Retrovirus-related Pol poly from transposon TNT 1-... [more]
H3GBA2_PHYRM3.010e-4040.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177V4F2_9BASI3.460e-4039.70Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 28..189
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 28..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17166contigH-paniculata_contig17166:1090..1776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17166.3996.1mRNA_H-paniculata_contig17166.3996.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17166 842..1892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17166.3996.1 ID=prot_H-paniculata_contig17166.3996.1|Name=mRNA_H-paniculata_contig17166.3996.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MKNLGSLSRVLGIEVRRDRPNGTITISQGSYTREVLKRYGFDECRGVPTP
VEGKVKISAADRGKSGNSTEYRGMVRSFMYASARTRPDIAYAVHQAARRM
GDPSRVDFSTCKRIFRYLSTVPDLGITFGGKSNGHDLEEFVDDDWAEDVE
DRKSTTGYIFELNGGAISWCSRKQQLVKWSSTDAEYIAAGEWGRRRYILG
SY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like