prot_H-paniculata_contig1716.3992.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1716.3992.1
Unique Nameprot_H-paniculata_contig1716.3992.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Match: D7G9H7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H7_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 9.570e-19
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:   11 ALGGVYSDDSCSVCLDEYEEGELLLQLTCGHVYHRVCIDLWLKDHCVCPC 60
            A  GVYSD+SCSVCLD+YEEG+ LLQ+TCGHV+HR CID WLK H VCPC
Sbjct:  183 ATRGVYSDNSCSVCLDDYEEGDELLQVTCGHVFHRACIDHWLKAHRVCPC 232          
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Match: A0A6H5JXK0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK0_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.030e-16
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 0
Query:   15 VYSDDSCSVCLDEYEEGELLLQLTCGHVYHRVCIDLWLKDHCVCPC 60
            +YSD+SCSVCLD+YEEG+ LLQ+TCGHV+HR CID WL  H VCPC
Sbjct:  267 LYSDNSCSVCLDDYEEGDELLQVTCGHVFHRACIDHWLMAHRVCPC 312          
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Match: A0A5J9VBE2_9POAL (RING-type domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9VBE2_9POAL)

HSP 1 Score: 67.4 bits (163), Expect = 1.880e-11
Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    3 AGGGDLEAALGGVYSDDSCSVCLDEYEEGELLLQL-TCGHVYHRVCIDLWLKDHCVCPCSGRCRLSHVNKFLDPTGKAAAGRNSRDA 88
            A GGDL+   GG   D++CSVCLD+ + G+++ QL +C H++H  CID+WL  H  CP   RC LS   K     GKA     + DA
Sbjct:  128 ADGGDLDLEAGG---DETCSVCLDDVQAGDMVRQLPSCKHLFHVECIDMWLHSHRTCPVC-RCNLSPPQKV---PGKATPAAPAADA 207          
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Match: A0A7S3V8L6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8L6_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.740e-11
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 0
Query:   18 DDSCSVCLDEYEEGELLLQLTCGHVYHRVCIDLWLKDHCVCP 59
            D SC +CL EYEEG++L Q+ CGHVYH+ CID W K+H  CP
Sbjct:  448 DPSCCICLCEYEEGDMLNQMKCGHVYHKECIDSWCKNHTRCP 489          
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Match: A0A7R9Z645_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z645_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.920e-11
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    8 LEAALGGVYSDD------SCSVCLDEYEEGELLLQLTCGHVYHRVCIDLWLKDHCVCP 59
            L+ A  G+  DD      SCS+CL +YEEGE L++L CGHVYH  C+  W+ +H  CP
Sbjct:  315 LDKAKAGIMMDDGNNEQPSCSICLGDYEEGERLIRLPCGHVYHEECVSAWVSNHVRCP 372          
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Match: A0A7S1VRK2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VRK2_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.780e-10
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    7 DLEAALGGVYSDD-SCSVCLDEYEEGELLLQLTCGHVYHRVCIDLWLKDHCVCP 59
            D + ++G +  +  SC++CL EYEEGE L++L CGHVYH  C+D W  +H  CP
Sbjct:  135 DSDDSVGDIEDEGPSCTICLGEYEEGEKLVKLPCGHVYHEECVDSWTTNHVRCP 188          
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Match: A0A835DTE5_9POAL (RING-type domain-containing protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835DTE5_9POAL)

HSP 1 Score: 64.7 bits (156), Expect = 2.430e-10
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    4 GGGDLEAALGGVYSDDSCSVCLDEYEEGELLLQLT-CGHVYHRVCIDLWLKDHCVCPCSGRCRL 66
            GGGD+E+ +      + CSVCL+++E GE++ +L  CGH++H  CID+WL+ H  CP   RC L
Sbjct:  142 GGGDIESGVDADAIVEQCSVCLEDFEAGEMVRRLPECGHMFHVECIDMWLESHRTCPVC-RCNL 204          
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Match: T1EKZ6_HELRO (RING-type domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EKZ6_HELRO)

HSP 1 Score: 60.1 bits (144), Expect = 4.640e-10
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:   18 DDSCSVCLDEYEEGELLLQLTCGHVYHRVCIDLWLKDHCVCP 59
            +DSC++CLD +EEG +  +L CGHVYH  CI  WLK +  CP
Sbjct:   10 NDSCTICLDNFEEGHIECELQCGHVYHPHCISDWLKKNYFCP 51          
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Match: A0A0E0G4A9_ORYNI (RING-type domain-containing protein n=1 Tax=Oryza nivara TaxID=4536 RepID=A0A0E0G4A9_ORYNI)

HSP 1 Score: 62.0 bits (149), Expect = 5.810e-10
Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    3 AGGGDLEAALGGVYSDDSCSVCLDEYEEGELLLQL-TCGHVYHRVCIDLWLKDHCVCPCSGRCRLS 67
            +GGGDLEA  G     + CS+CL+E   GE++ ++ +C H++H VCID+WL  H  CP   RC LS
Sbjct:   58 SGGGDLEAGNG-----EPCSMCLEELHTGEMVREMPSCKHLFHVVCIDMWLHSHRTCPMC-RCDLS 117          
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Match: D2VEK0_NAEGR (RING-type domain-containing protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VEK0_NAEGR)

HSP 1 Score: 59.7 bits (143), Expect = 6.420e-10
Identity = 21/46 (45.65%), Postives = 33/46 (71.74%), Query Frame = 0
Query:   14 GVYSDDSCSVCLDEYEEGELLLQLTCGHVYHRVCIDLWLKDHCVCP 59
            G + D SC+VC+ ++EE + L++L CGHV+H+ C+  WL +H  CP
Sbjct:    2 GEHCDQSCAVCICDFEECDELIRLPCGHVFHKDCVSTWLNEHNTCP 47          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1716.3992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9H7_ECTSI9.570e-1976.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JXK0_9PHAE1.030e-1673.91RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A5J9VBE2_9POAL1.880e-1143.68RING-type domain-containing protein (Fragment) n=1... [more]
A0A7S3V8L6_9STRA4.740e-1161.90Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9Z645_9STRA5.920e-1148.28Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1VRK2_9STRA1.780e-1048.15Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A835DTE5_9POAL2.430e-1045.31RING-type domain-containing protein n=2 Tax=Digita... [more]
T1EKZ6_HELRO4.640e-1054.76RING-type domain-containing protein n=1 Tax=Helobd... [more]
A0A0E0G4A9_ORYNI5.810e-1046.97RING-type domain-containing protein n=1 Tax=Oryza ... [more]
D2VEK0_NAEGR6.420e-1045.65RING-type domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 21..58
e-value: 5.4E-4
score: 29.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 19..60
e-value: 7.3E-10
score: 39.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 21..59
score: 10.601
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 8..68
e-value: 2.5E-14
score: 54.7
NoneNo IPR availablePANTHERPTHR45977FAMILY NOT NAMEDcoord: 18..71
NoneNo IPR availablePANTHERPTHR45977:SF4TARGET OF ERK KINASE MPK-1coord: 18..71
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 16..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1716contigH-paniculata_contig1716:1712..9086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1716.3992.1mRNA_H-paniculata_contig1716.3992.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1716 562..9086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1716.3992.1 ID=prot_H-paniculata_contig1716.3992.1|Name=mRNA_H-paniculata_contig1716.3992.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
IFAGGGDLEAALGGVYSDDSCSVCLDEYEEGELLLQLTCGHVYHRVCIDL
WLKDHCVCPCSGRCRLSHVNKFLDPTGKAAAGRNSRDAILLYRFPTWRRR
GQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD