mRNA_H-paniculata_contig17151.3989.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Match: A0A6H5KG25_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG25_9PHAE) HSP 1 Score: 402 bits (1033), Expect = 2.400e-129 Identity = 207/258 (80.23%), Postives = 234/258 (90.70%), Query Frame = 1
Query: 37 QAVLTGVIPVASAVGYLVMPSSKVAVSAIGAAVSGVGGVVARKKLVQARRESAPAQVARLLETKGVGNITPVELKETLGSFGLEGEDAEDILVEIFSKYVVAMCQHSATKTSEIKELSQLRETLGLDGLLMGEALYQAASPIYSQFVARTPSTELADEWSPNRRSLDKFLFLCDRMFEVCDTEEAYSFEMSRISKIFDITLPDVKSRCAAIAGPFYDKALTSAAAKWDAVKAEQLQRARKTLGMQDDVVTEMHKTVYR 810
+AVLTGVIPVASAVGYL MP VAVSA+GA SGVGG +AR+KL QARRESAPA VA LL+ KGVGNITP+E+ E+LGSFGLEGE+AED+L++IFSKYVVAMCQ+SATKTSEIKELS+LRETLGLDGLLMGEALYQAASP+YSQFV RTPS ELADEWSPNRR+LDKF+FLCDRMFEVCDTEEAYSFEMSRISK+FD+ L +VK RCAAIA PFY KAL SAAAKW++VKA+QL+RAR+TLGM ++V EMHK VYR
Sbjct: 96 KAVLTGVIPVASAVGYLAMPGG-VAVSAVGAVASGVGGNLARRKLKQARRESAPAHVAGLLDAKGVGNITPLEIMESLGSFGLEGEEAEDVLIQIFSKYVVAMCQNSATKTSEIKELSELRETLGLDGLLMGEALYQAASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVCDTEEAYSFEMSRISKMFDLNLGEVKERCAAIANPFYRKALGSAAAKWESVKADQLKRARQTLGMDEEVAHEMHKEVYR 352
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Match: A0A835YSG6_9STRA (IAP100 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG6_9STRA) HSP 1 Score: 254 bits (648), Expect = 3.590e-74 Identity = 129/258 (50.00%), Postives = 188/258 (72.87%), Query Frame = 1
Query: 37 QAVLTGVIPVASAVGYLVMPSSKVAVSAIGAAVSGVGGVVARKKLVQARRESAPAQVARLLETKGVGNITPVELKETLGSFGLEGEDAEDILVEIFSKYVVAMCQHSATKTSEIKELSQLRETLGLDGLLMGEALYQAASPIYSQFVARTPSTELADEWSPNRRSLDKFLFLCDRMFEVCDTEEAYSFEMSRISKIFDITLPDVKSRCAAIAGPFYDKALTSAAAKWDAVKAEQLQRARKTLGMQDDVVTEMHKTVYR 810
+AV TG+IP A+ VG+L+ P KV VSA+GAAV+G+ G +A++KL + +APA VA LL++KG+ N+ P ++ L ++G++G++A D+L++++ ++++AMC+ SATK ++I+EL LR+ LGLDG +G A Y+A++ +Y + V TP ELADE++P RR+LDKFLFL DRMFEV DTEEAY +EM RI K+F + DV +RC AIA PFY KAL +AAA+ D ++ L+ A KTLG+ D + EMH YR
Sbjct: 36 KAVSTGLIPAAAVVGFLITPGGKV-VSAVGAAVTGLAGTLAKRKLGDESKAAAPAAVAELLQSKGLTNVRPADITAVLATYGVQGDEASDLLIDVYRRFLLAMCKGSATKAADIRELRDLRQALGLDGEQIGTAHYEASTLLYRERVLFTPEEELADEYNPARRALDKFLFLADRMFEVSDTEEAYEYEMGRIRKVFGLDAADVNARCLAIARPFYAKALDAAAARLDTLRPGALELAEKTLGITDVMRDEMHLEAYR 292
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Match: A0A7S4MJ83_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MJ83_9STRA) HSP 1 Score: 170 bits (430), Expect = 3.180e-44 Identity = 94/257 (36.58%), Postives = 160/257 (62.26%), Query Frame = 1
Query: 49 TGVIPVASAVGYLVMPSSKVAVSAIGAAVSGVGGVVARKKLVQARRESAPAQVARLLETKGVGNITPVE-LKETLGSFGLEGEDAEDILVEIFSKYVVAMCQHSATKTSEIKELSQLRETLGLDGLLMGEALYQAASPIYSQFVARTPSTELADEWSPNRRSLDKFLFLCDRMF-EVCDTEEAYSFEMSRISKIFDITLPDVKSRCAAIAGPFYDKALTSAAAKWDA--VKAEQLQRARKTLGMQDDVVTEMHKTVY 807
T IP A+A+G+L+ PS ++A A+G+A++GV G++ + ++ A +A +A+ + GV + + + + +FG+E ED E++ +++ +Y+ M ++ KT ++KELSQLR L +D L +GEA AA Y Q TP +L D P+R S+DKFLFL +R F + +T+EA+ FEMSR++K F I L + R A ++ PFY +AL S +K ++ V ++ L+RARK+LG+ D + +++H + +
Sbjct: 107 TAAIPAAAALGFLMTPSRRLAAHAVGSAITGVAGIIGKSRIDAATEAAAKPAIAQAIIDLGVDDDGLADAIADVKDTFGVEDEDFEEMCSDVYRRYLTGMVKNPIAKTGDLKELSQLRAALEMDNLGVGEAHASAAKEFYRQTCLFTPEEDLDDPGHPDRMSIDKFLFLSERAFRQAGETDEAFKFEMSRVAKAFKIQLDEALDRVAEVSEPFYRRALASTRSKLESGQVSSDMLRRARKSLGIDDVMASDLHISTF 363
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Match: A0A7S2UAH8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAH8_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.250e-36 Identity = 96/268 (35.82%), Postives = 153/268 (57.09%), Query Frame = 1
Query: 58 IPVASAVGYLVMPSSKVAVSAIGAAVSGVGGVVARKKLVQARRESAPAQVARLLETKGVGNITPVELKETLGS----FGLEGEDAEDILVEIFSKYVVAMCQHSA-TKTSEIKELSQLRETLGLDGLLMGEALYQAASPIYSQFVARTPSTELADEWSPNRRSLDKFLFLCDRMFEVC-DTEEAYSFEMSRISKIFDI--------------TLPDVKSRCAAIAGPFYDKALTSAAAKWD--AVKAEQLQRARKTLGMQDDVVTEMH 795
+PV++ VG+++ PS ++A +G+ V+G G + + +L A +A +A+ + G+ + L + S + +E D E +I+ Y++ M +++ KT+E+KEL +L++ LGL LL+GEA AA +Y Q TP ELAD P+R +LDKFLFL +R F +T EA+S+EMSRI+K FDI + ++ R A +A PFY +AL S AK D AV+ + L+RAR T+G+ ++V +MH
Sbjct: 104 VPVSAVVGFVMTPSRRLAAHTVGSIVTGSLGAIGKSRLDMAASAAALPAIAQAVIDHGLDASSEASLTSAIASVKSTYNMEDGDFEAACGDIYKSYLIGMVKNNPIAKTAELKELVRLKDVLGLGNLLVGEAHATAAKDLYRQTCLFTPEEELADVDHPDRMALDKFLFLSERTFVGNGETPEAFSYEMSRIAKAFDIKITKSNAAAADVGGAMSEIMERVAHVAEPFYRRALVSTRAKLDSGAVQPDVLKRARATVGISEEVARDMH 371
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Match: A0A448YYM0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYM0_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.770e-35 Identity = 94/257 (36.58%), Postives = 150/257 (58.37%), Query Frame = 1
Query: 58 IPVASAVGYLVMPSSKVAVSAIGAAVSGVGGVVARKKLVQARRESAPAQVARLLETKGVGN--ITPVELKETLGSFGL-EGEDAEDILVEIFSKYVVAMCQHSAT-KTSEIKELSQLRETLGLDGLLMGEALYQAASPIYSQFVARTPSTELADEWSPNRRSLDKFLFLCDRMFEVC-DTEEAYSFEMSRISKIFDITLPDVKSRCAAIAGPFYDKALTSAAAKWDA--VKAEQLQRARKTLGMQDDVVTEMHKTVY 807
IPV++A+G+ ++PS ++A A GA ++GV G V + KL +A +A+ + G+ + T +K S G+ + ED + + +++SKY++ M + + K+SE KEL +L+ +LGLD LL+GEA AA Y TP +L D P+R+++DKFLFL +R + +T+EA+ FEM+R++K ++L D R A + PFY +AL S AK V L+RAR+TLG+ DD +MH +
Sbjct: 96 IPVSAALGFGIVPSRRLAAHAAGAIITGVAGAVGKSKLDAVTEAAALPAIAQAIIDHGIEDPATTYGYVKSLQESHGIVDSEDFQLLCADVYSKYLLGMVKFNPMPKSSEPKELGKLKASLGLDNLLVGEAHAAAADEWYRTTCLFTPEEDLEDPDHPDRQAMDKFLFLTERALKQGNETDEAFRFEMTRVAKSMKLSLMDAMFRVADVQQPFYARALVSTRAKLGEGKVSGAMLERARQTLGIDDDTAHDMHVACF 352
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Match: B7GEF3_PHATC (Translocator of the inner chloroplast envelope membrane 110k n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEF3_PHATC) HSP 1 Score: 144 bits (362), Expect = 3.780e-35 Identity = 91/258 (35.27%), Postives = 150/258 (58.14%), Query Frame = 1
Query: 58 IPVASAVGYLVMPSSKVAVSAIGAAVSGVGGVVARKKLVQARRESAPAQVARLLETKGVGN----ITPVELKETLGSFGLEGEDAEDILVEIFSKYVVAMCQHSAT-KTSEIKELSQLRETLGLDGLLMGEALYQAASPIYSQFVARTPSTELADEWSPNRRSLDKFLFLCDRMFEVC-DTEEAYSFEMSRISKIFDITLPDVKSRCAAIAGPFYDKALTSAAAKW--DAVKAEQLQRARKTLGMQDDVVTEMHKTVY 807
IP+++A+G+ ++PS ++A +GA +G+ G V + +L +A +A+ + G+ + VE +T FGL ED + EI++ Y++ M +++ T KTSE+KEL ++ L LD L +GEA AA+ Y TP+ +L D P+R+++DKFLFL +R + +T+EA+SFEM R++K FD++ +V R A PFY +AL S +K + V + L+RARKTLG+ D ++H +
Sbjct: 118 IPLSAALGFGLVPSRRLAAHTVGALFTGIAGAVGKSRLDALTESNAKPAIAQAIVEAGLDDPDKAAAAVENVKT--QFGLLDEDFAILTTEIYTAYLLGMVKYNPTAKTSELKELETVKNVLQLDNLQVGEAHAAAAAEWYRTTCLFTPTEDLEDPSHPDRQAMDKFLFLTERALKQGGETDEAFSFEMKRVAKAFDLSYTEVLERVAETVEPFYQRALKSTRSKLGTNQVSSAMLERARKTLGVSDATAKDLHVACF 373
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Match: A0A7S4EEP3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEP3_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.030e-33 Identity = 93/259 (35.91%), Postives = 146/259 (56.37%), Query Frame = 1
Query: 58 IPVASAVGYLVMPSSKVAVSAIGAAVSGVGGVVARKKLVQARRESAPAQVARLLETKGVGNITPV-----ELKETLGSFGLEGEDAEDILVEIFSKYVVAMCQHSAT-KTSEIKELSQLRETLGLDGLLMGEALYQAASPIYSQFVARTPSTELADEWSPNRRSLDKFLFLCDRMFEVCD-TEEAYSFEMSRISKIFDITLPDVKSRCAAIAGPFYDKALTSAAAKWDAVKAEQ--LQRARKTLGMQDDVVTEMHKTVY 807
IPV++A+G+ ++PS ++A A GA V+GV G + + KL A +A+ + G+ + LKET G ++ +D + + +++SKY++ M + + K+SE KEL +L+ LGL LL+GEA AA Y TP +L D P+R+++DK LFL +R + D T+ A+ FEM+R+SK ++L D R A + PFY +AL S AK K + L+RAR+TLG+ DD +MH +
Sbjct: 110 IPVSAALGFGIVPSRRLAAHAAGAIVTGVAGAIGKSKLDAVTESVALPNIAQTIIDYGIEDPATTYGYVKSLKETHGI--IDDDDFQLMCADVYSKYLLGMVKFNPMPKSSEPKELGKLKTALGLSNLLVGEAHAAAAEEWYRTTCLFTPEEDLDDPDHPDRQAMDKLLFLTERALKQGDETDAAFRFEMARVSKFMKLSLVDGMYRVADVQQPFYARALVSTRAKLGEGKVSEAMLERARQTLGIDDDTAHDMHVACF 366
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Match: A0A7S4C080_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C080_CHRCT) HSP 1 Score: 133 bits (335), Expect = 1.450e-31 Identity = 85/261 (32.57%), Postives = 147/261 (56.32%), Query Frame = 1
Query: 28 VIIQAVLTGVIPVASAVGYLVMPSSKVAVSAIGAAVSGVGGVVARKKLVQARRESAPAQVARLLETKGVGNITPVELKETLGSFGLEGEDAEDILVEIFSKYVVAMCQHSATKTSEIKELSQLRETLGLDGLLMGEALYQAASPIYSQFVARTPSTELADEWSPNRRSLDKFLFLCDRMFEVCDTEEAYSFEMSRISKIFDITLPDVKSRCAAIAGPFYDKALTSAAAKWDAVKAEQLQRARKTLGMQDDVVTEMHKTVYR 810
++ Q + V+ ++A G+ + PS K+A++A+G A++G G+V RKKL RR+SA VA LL +KG+ +T EL G++ + + L E++ ++ + + +TSE+ EL +L E L L G +Y A +YS+ R + AD S ++R L+KF+F+ +R+ + ++EE Y +E +R+ KIF ++ + K+R A PFY++ L + +V AEQL R R +LG+ D +H V++
Sbjct: 40 IVAQGTMASVVAASAAAGFFLTPSRKLALNAVGGAITGGLGLVVRKKLSDQRRDSAAIGVANLL-SKGLDAVTASELAAVAEHHGVDKQAFQKQLAELYFVFLSSCMESPRIETSELSELKKLIELLRLSHAQTGMQVYAAGRALYSRH--RAYIEDEAD--SDSKRLLNKFIFIAERLLSLDESEEGYRYEATRLQKIFSLSASEWKTRAEDAATPFYEQTLDMIV-QGKSVSAEQLSRVRASLGISDAKADTLHADVFK 294
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Match: R1ELU4_EMIHU (Tic110 n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ELU4_EMIHU) HSP 1 Score: 133 bits (335), Expect = 1.460e-31 Identity = 81/254 (31.89%), Postives = 142/254 (55.91%), Query Frame = 1
Query: 49 TGVIPVASAVGYLVMPSSKVAVSAIGAAVSGVGGVVARKKLVQARRESAPAQVARLLETKGVGNITPVELKETLGSFGLEGEDAEDILVEIFSKYVVAMCQHSATKTSEIKELSQLRETLGLDGLLMGEALYQAASPIYSQFVARTPSTELADEWSPNRRSL-DKFLFLCDRMFEVCDTEEAYSFEMSRISKIFDITLPDVKSRCAAIAGPFYDKALTSAAAKWDAVKAEQLQRARKTLGMQDDVVTEMHKTVY 807
T ++ A+AVGY++MPSS++AV+A+GAA +G G+V RKK+ + RRE+ A LL+ +G+ +T E+ +FG++ + L E+F Y+ A + +E+ EL QL+E LG+ +G +Y A +YS+ A S ++ + + ++L K++FL +R+F ++EE Y +E R ++F ++ D R A+A PFY L A + A QL R +LG+ + ++H+ ++
Sbjct: 75 TALVAAAAAVGYVLMPSSRIAVNAVGAAATGALGLVGRKKIDEERREAXXXXXAALLK-RGLSAVTADEIASLAPAFGVDKPRYQKQLSELFLYYLSACLEGKQVLPAELSELLQLKELLGMSAAQVGNQVYAAGRALYSRHRAYLESDVESEPLAADAQALLSKYIFLAERLFAKDESEEGYRYESLRAQRLFGLSPADWSDRAEAVAVPFYAGTLDKAVLQAVPATAAQLGGMRDSLGVSEATAAQLHRDIF 327
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Match: A0A7S0LEM0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LEM0_9EUKA) HSP 1 Score: 129 bits (325), Expect = 3.110e-30 Identity = 84/257 (32.68%), Postives = 138/257 (53.70%), Query Frame = 1
Query: 37 QAVLTGVIPVASAVGYLVMPSSKVAVSAIGAAVSGVGGVVARKKLVQARRESAPAQVARLLETKGVGNITPVELKETLGSFGLEGEDAEDILVEIFSKYVVAMCQHSATKTSEIKELSQLRETLGLDGLLMGEALYQAASPIYSQFVARTPSTELADEWSPNRRSLDKFLFLCDRMFEVCDTEEAYSFEMSRISKIFDITLPDVKSRCAAIAGPFYDKALTSAAAKWDAVKAEQLQRARKTLGMQDDVVTEMHKTVY 807
Q + GV+ A+A GY +MPSSK+AV+AIG AV+G G++AR +LV+ R+++A VA LL KG+ ++ + G+ + + E+F Y+ ++ + +T+E+ EL +L + L L +G ++ A +YS A E +D +R LDKF+FL +R+ ++EE Y +E R+ +IF +++ + SR A PFY K L SA + + + QL R LG+ +H VY
Sbjct: 92 QGAMAGVVAAAAAAGYALMPSSKIAVNAIGGAVTGGVGLLARARLVEQRKDAASLAVAVLL-AKGIDTVSDDAISAVGDRHGVGKKRFQQQKAELFLLYMNSVLRKPDIETTELSELKRLIKVLRLSNAQVGMQVHAAGRTVYSTNRAYIEDEEDSD----GKRILDKFVFLAERLIAADESEEGYKYEAMRLQRIFSLSVGEWNSRAEDAAVPFYRKTLDSAVMQGASATSAQLVTVRDALGVSASKAQSLHDEVY 343 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17151.3989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17151.3989.1 >prot_H-paniculata_contig17151.3989.1 ID=prot_H-paniculata_contig17151.3989.1|Name=mRNA_H-paniculata_contig17151.3989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=273bp MIGRDVSFYVIIQAVLTGVIPVASAVGYLVMPSSKVAVSAIGAAVSGVGGback to top mRNA from alignment at H-paniculata_contig17151:357..5286- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17151.3989.1 ID=mRNA_H-paniculata_contig17151.3989.1|Name=mRNA_H-paniculata_contig17151.3989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4930bp|location=Sequence derived from alignment at H-paniculata_contig17151:357..5286- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17151:357..5286- >mRNA_H-paniculata_contig17151.3989.1 ID=mRNA_H-paniculata_contig17151.3989.1|Name=mRNA_H-paniculata_contig17151.3989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1638bp|location=Sequence derived from alignment at H-paniculata_contig17151:357..5286- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |