mRNA_H-paniculata_contig17147.3987.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17147.3987.1
Unique NamemRNA_H-paniculata_contig17147.3987.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Match: D7FPW1_ECTSI (Sulfate permease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW1_ECTSI)

HSP 1 Score: 472 bits (1214), Expect = 1.670e-162
Identity = 240/315 (76.19%), Postives = 275/315 (87.30%), Query Frame = 1
Query:    1 KGLAFATVAGIPLLYGLYIVWMPPFIYSLFGMSIHVSFGPFALVGLFISDALGNRGYKPCDGLCRHDTEQTREYLEACTILTFMVSVWYFIMALLKLGEPLAILLADPVINGFVCASAILVANSQAWEKRTAINWASVAVGVGSIVVYFTLRRCNAHLKSKGVTGFFVPEALSAVIVSTLFSWVVDLDGVYGVDIVGPIPPGLPPPRFPRLDKLTSLEMVEDFAGVALVAAIVAFIITHSIAKSLAGSTEIKATPQLFAFGAANLVGSIFSSLPGSASLSRAAIIDALDARTIVHNVFTFALMTAVLLFLSPLLE 945
            +GLAFATV+GIP+LYGLYIVW PPF YSLFG+S+HVS+GPFALVGLFISDAL  RGY+PCDGLCRH T++T+ YLEACTI+TFMVS+WYF+MA+  LGEPLA+LLADPVI+GFV ASA+LVANSQ WE R  INW SV +GVGS++VYF LRR NA++K +GV GFFVPEAL+ VI+ST  SW  DL+G   V IVG IPPGLP P+FPRLDKLT+   VED AGVALVAA+V+FIITHSIAKSLAG+ EIKATPQL AFG ANL GSIFS+LPGSASLSRAAIIDAL ARTI+HNVFTF+LMT VLLFLSPLL+
Sbjct:   47 QGLAFATVSGIPILYGLYIVWAPPFFYSLFGVSLHVSYGPFALVGLFISDALRIRGYQPCDGLCRHKTDETQAYLEACTIITFMVSMWYFLMAMFNLGEPLAMLLADPVISGFVTASALLVANSQLWEVRDTINWWSVTMGVGSMLVYFALRRGNAYIKDRGVAGFFVPEALTVVILSTFLSWAFDLEGTQDVAIVGTIPPGLPAPKFPRLDKLTTFAQVEDMAGVALVAALVSFIITHSIAKSLAGAQEIKATPQLLAFGVANLAGSIFSALPGSASLSRAAIIDALGARTIIHNVFTFSLMTLVLLFLSPLLK 361          
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Match: A0A6H5L827_9PHAE (SulP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L827_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 4.520e-109
Identity = 177/236 (75.00%), Postives = 202/236 (85.59%), Query Frame = 1
Query:  238 ILTFMVSVWYFIMALLKLGEPLAILLADPVINGFVCASAILVANSQAWEKRTAINWASVAVGVGSIVVYFTLRRCNAHLKSKGVTGFFVPEALSAVIVSTLFSWVVDLDGVYGVDIVGPIPPGLPPPRFPRLDKLTSLEMVEDFAGVALVAAIVAFIITHSIAKSLAGSTEIKATPQLFAFGAANLVGSIFSSLPGSASLSRAAIIDALDARTIVHNVFTFALMTAVLLFLSPLLE 945
            ++TFMVS+WYF+MA+  LGEPLA+LLADPVI+GFV ASA+LVANSQ WE R  INW SV +GVGS++VYF LRR NA++KS+GV GFFVPEAL+ VI+ST  SW  DL+G   V IVG IPPGLP P+FPRLDKLT+   VED AGVALVAA+V+FIITHSIAKSLAG+ EIKATPQL AFG ANL GSIFS+LPGSASLSRAAIIDAL ARTI+HNVFTF LMT VLLFLSPLL+
Sbjct:    1 MITFMVSMWYFLMAIFNLGEPLAMLLADPVISGFVTASALLVANSQLWEVRDTINWWSVTMGVGSMLVYFALRRGNAYIKSRGVAGFFVPEALTVVILSTFVSWAFDLEGTQDVAIVGTIPPGLPAPKFPRLDKLTTFAQVEDMAGVALVAALVSFIITHSIAKSLAGAQEIKATPQLLAFGVANLAGSIFSALPGSASLSRAAIIDALGARTIIHNVFTFVLMTLVLLFLSPLLK 236          
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Match: UPI00064522B8 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064522B8)

HSP 1 Score: 140 bits (352), Expect = 2.390e-33
Identity = 108/343 (31.49%), Postives = 171/343 (49.85%), Query Frame = 1
Query:    1 KGLAFATVAGIPLLYGLYIVWMPPFIYSLFGMSIHVSFGPFALVGLFISDALGNRGYKPCDGLCRHDTEQTREYLEACTILTFMVSVWYFIMALLKLGEPLAILLADPVINGFVCASAILVANSQAWE---------------------KRTAINWASVAVGVGSIVVYFTLRRCNAHLKSKGVTGFFVPEALSAVIVSTLFSWVVDLDGVYGVDIVGPIPPGLPPPRFPRLDKLTS-----LEMVEDFAGVALVAAIVAFIITHSIAKSLAG--STEIKATPQLFAFGAANLVGSIFSSLPGSASLSRAAIIDALDARTIVHNVFTFALMTAVLLFLSPLLE 945
            +G+A+A VA +P++YGLY   +P F Y +FG S H+SFGPFA++ L + + +        +G+   D++          +L F+  ++  I+ L + G  +A  L+DPV  GFV   A+++ +SQ                        K    NW S+ + V  IV    +++ N     K      +P  L  V++ T  SWV  L+   G+D+VGPIP GLP P FP +          L MV +    ALV  +V FI + SI  ++A   + +I    +L A GA++ +GS F S P  ASLSR A+  +  ART V +  T  ++ + L FL+ +++
Sbjct:  254 QGMAYALVADLPMVYGLYSSIVPIFAYCVFGTSRHLSFGPFAIISLLVLETV--------NGVVG-DSQDMELRTSIAILLAFVCGLYQIILGLFRFGF-VANFLSDPVKTGFVSGCALIIGSSQFKHIFGYKVEASDCLPVLLVRYLIKIKEANWWSILIAVAGIVFLLGMKKFNQRFNLK------LPGPLIIVMILTFISWVFKLEERTGIDVVGPIPSGLPIPTFPTIPARDGRDNNWLHMVINITPGALVLILVGFISSVSIGATIAEKYNYDIDPNQELIALGASDFIGSFFLSFPVGASLSRTAVNASSGARTQVASFITALVIVSSLFFLTHIIK 580          
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Match: UPI0003B3FE14 (sulfate permease n=1 Tax=Salisaeta longa TaxID=503170 RepID=UPI0003B3FE14)

HSP 1 Score: 137 bits (345), Expect = 8.310e-33
Identity = 116/336 (34.52%), Postives = 165/336 (49.11%), Query Frame = 1
Query:    1 KGLAFATVAGIPLLYGLYIVWMPPFIYSLFGMSIHVSFGPFALVGLFISDALGNRGYKPCDGLCRHDTEQTREYLEACTILTFMVSVWYFIMALLKLGEPLAILLADPVINGFVCASAILVANSQ---------------------AWEKRTAINWASVAVGVGSIVVYFTLRRCNAHLKSKGVTGFFVPEALSAVIVSTLFSWVVDLDGVYGVDIVGPIPPGLPPPRFPRLDKLTSLEMVEDFAGVALVAAIVAFIITHSIAKSLAG--STEIKATPQLFAFGAANLVGSIFSSLPGSASLSRAAIIDALDARTIVHNVFTFALMTAVLLFLSPL 939
            + +A+A +AG+P +YGLY    PP IY++ G S H++ GP AL  L ++  L         GL       + EY+     LT +  V+   M L + G   A LL+ PVI G   A+AI++A SQ                     A +   + +  S+A+G G + V   LRR             +VP AL  V+ +TL SW+ ++    GVDIVG IP GLP PR P L    SL  +E     AL  A+V F+   S+ +  A   +  I A  +L   GAAN +GS+F  +P S S SR+A+ D   ART + NV    ++   LLFL+PL
Sbjct:   38 QAMAYAVIAGLPPIYGLYAALAPPLIYAVLGSSRHLAIGPVALDMLIVAAGLS--------GLA---ATGSAEYVALTIALTALAGVFQVGMGLAQFGFA-ANLLSRPVITGLTTAAAIIIAGSQLGTLMGISLPQSQYVHVLVTAAIQNVESTHLLSLAIGGGCVAVLVLLRRLAP----------WVPGALVVVVGATLVSWLGNVQAA-GVDIVGSIPTGLPEPRLPDL----SLANIELLWPAALTLALVQFMKNASLGRVFATRHNYTINANQELVGIGAANAIGSLFQGIPASGSFSRSAVNDQAGARTPMANVMASVVIILTLLFLTPL 346          
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Match: A0A7C5L862_9BACT (Solute carrier 26 family protein n=1 Tax=Phaeodactylibacter sp. TaxID=1940289 RepID=A0A7C5L862_9BACT)

HSP 1 Score: 133 bits (334), Expect = 2.380e-31
Identity = 105/336 (31.25%), Postives = 162/336 (48.21%), Query Frame = 1
Query:    1 KGLAFATVAGIPLLYGLYIVWMPPFIYSLFGMSIHVSFGPFALVGLFISDALGNRGYKPCDGLCRHDTEQTREYLEACTILTFMVSVWYFIMALLKLGEPLAILLADPVINGFVCASAILVANSQ---------------------AWEKRTAINWASVAVGVGSIVVYFTLRRCNAHLKSKGVTGFFVPEALSAVIVSTLFSWVVDLDGVYGVDIVGPIPPGLPPPRFPRLDKLTSLEMVEDFAGVALVAAIVAFIITHSIAKSLAGST---EIKATPQLFAFGAANLVGSIFSSLPGSASLSRAAIIDALDARTIVHNVFTFALMTAVLLFLSP 936
            +G+A+A +AG+P +YGLY   +P  IY++FG S  ++ GP A+  L  +  +G         L    TE    Y++    L  MV +  F++ + ++G  L   L+ PVI+GF  A+A+++  SQ                     A+EK   IN+A++AVG+  I +   L+R N            +P +L AV    L  W++ L   YGV IVG IP GLPP   P  D  +   ++      AL  A V F+ + SIAK++       +I A  +L A G A + GS F S P     +R A+ D   ART +  + +  ++   LLF +P
Sbjct:   38 QGMAYAMLAGLPPIYGLYAATVPLIIYAIFGTSRQLAVGPVAMGSLLTATGVGM--------LAESGTEA---YIQLAITLALMVGLLQFLLGIFRMGF-LVNFLSHPVISGFTSAAALIIGFSQLKHLLGIEIPRSHHIHEILFQAFEKADQINYATLAVGISGIALILILKRINRS----------IPGSLIAVFFGILLVWLLGLSERYGVKIVGKIPEGLPPFSIPNFDGASLRALMPT----ALTVAFVGFMESISIAKAIQAKHRDYKIDANQELIALGLAGIGGSFFKSYPVMGGFARTAVNDQAGARTGLAGIISAGVILLTLLFFTP 347          
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Match: A0A2E1AQH7_9FLAO (Sodium-independent anion transporter n=1 Tax=Muricauda sp. TaxID=192149 RepID=A0A2E1AQH7_9FLAO)

HSP 1 Score: 130 bits (327), Expect = 2.280e-30
Identity = 107/337 (31.75%), Postives = 167/337 (49.55%), Query Frame = 1
Query:    1 KGLAFATVAGIPLLYGLYIVWMPPFIYSLFGMSIHVSFGPFALVGLFISDALGNRGYKPCDGLCRHDTEQTREYLEACTILTFMVSVWYFIMALLKLGEPLAILLADPVINGFVCASAILVANSQA---------------------WEKRTAINWASVAVGVGSIVVYFTLRRCNAHLKSKGVTGFFVPEALSAVIVSTLFSWVVDLDGVYGVDIVGPIPPGLPPPRFPRLDKLTSLEMVEDFAGVALVAAIVAFIITHSIAKSLAGST---EIKATPQLFAFGAANLVGSIFSSLPGSASLSRAAIIDALDARTIVHNVFTFALMTAVLLFLSPL 939
            +G+A+A +AG+P +YGLY   +P F+Y++ G S  ++ GP A+  L ++  +G                 T +Y+ A   LT +V +   ++ +LK+G      L+ PVINGF  A+AIL+   Q                      +E  T +N  ++ +GV  I++   LRR N  L          P  L AVIV  L    + L+   G+ +VG IP GLP  + PR+      E +  F  +AL  A+  F+ + SIAK+L       E+ A  +L A G +N++GS F S   S   SR+A+ D   A+T +  VF+  ++ A+LLFL+PL
Sbjct:   37 QGMAYAMIAGLPPIYGLYAALVPQFVYAITGSSRQLAVGPVAMDSLLVAAGIGAM-----------QLANTEDYIAAVLFLTLLVGLVQLLLGILKMGF-FVNFLSKPVINGFTSAAAILIGLGQLKHILGVDLPQSGKIYVLLGSIFENITEVNLLTLGMGVLVILMIIGLRRINKRL----------PIPLLAVIVGILAVVFLGLEAK-GIKVVGEIPKGLPSFQVPRM----KWENIGQFLPIALTVALFGFMESISIAKTLEEKHPEYELDANQELRALGLSNILGSFFQSFSVSGGFSRSAVNDEAGAKTNMSLVFSTLVIAAILLFLTPL 346          
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Match: A0A1Q3H3A2_9BACT (Sodium-independent anion transporter n=2 Tax=Cytophagales TaxID=768507 RepID=A0A1Q3H3A2_9BACT)

HSP 1 Score: 130 bits (327), Expect = 2.350e-30
Identity = 107/339 (31.56%), Postives = 171/339 (50.44%), Query Frame = 1
Query:    1 KGLAFATVAGIPLLYGLYIVWMPPFIYSLFGMSIHVSFGPFALVGLFISDALGNRGYKPCDGLCRHDTEQTREYLEACTILTFMVSVWYFIMALLKLGEPLAILLADPVINGFVCASAILVANSQ---------------------AWEKRTAINWASVAVGVGSIVVYFTLRRCNAHLKSKGVTGFFVPEALSAVIVSTLFSWVVDLDGVYGVDIVGPIPPGLPPPRFP--RLDKLTSLEMVEDFAGVALVAAIVAFIITHSIAKSLAG---STEIKATPQLFAFGAANLVGSIFSSLPGSASLSRAAIIDALDARTIVHNVFTFALMTAVLLFLSPL 939
            +G+A+A +AG+P +YGLY   +P  IY++ G S  ++ GP A+  L ++            G+    T  T EY+    +L FM+     +  + +LG  L   L+ PVI+GF  A+A ++  +Q                     A  K   ++WA++A+GVG I+V   ++    + K+       +P AL  V++S L  +++ LD V GV IV  +P GLP P  P   LDK+++L         AL  A++AF+   S+AK++       EI A  +L A G ANL+GS F S PG+   SR A+ D   A+T V  + +  ++   L+ L+PL
Sbjct:   38 QGMAYAYIAGLPPVYGLYAALVPQIIYAILGTSRQLAVGPVAMDSLLVAS-----------GVSVMATSGTEEYITLAIMLAFMMGAMQLLFGIFRLGF-LVNFLSRPVISGFTSAAAFIIGLNQLKHLMGVELPRSNQVHQLIYNALLKLEKVHWATLAIGVGGIIV---IKLVKKYRKA-------IPAALVVVVLSILVVYLLRLDLV-GVQIVQQVPGGLPVPALPSFNLDKMSALMPT------ALTLALIAFMEAISVAKAVQARHKDYEIDANQELIALGTANLIGSFFKSYPGTGGFSRTAVNDQGGAKTGVAALVSAIVVALTLIALTPL 347          
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Match: A0A6H5LEN1_9PHAE (SulP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEN1_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 2.790e-30
Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 1
Query:    1 KGLAFATVAGIPLLYGLYIVWMPPFIYSLFGMSIHVSFGPFALVGLFISDALGNRGYKPCDGLCRHDTEQTR 216
            +GLAFATV+GIP+LYGLYIVW PPF YSLFG+S+HVS+GPFALVGLFISDAL  RGY+PCDGLCR   E+T+
Sbjct:   51 QGLAFATVSGIPILYGLYIVWAPPFFYSLFGVSLHVSYGPFALVGLFISDALRIRGYQPCDGLCRDQPEETK 122          
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Match: A0A523GMD0_9BACT (Solute carrier 26 family protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A523GMD0_9BACT)

HSP 1 Score: 129 bits (325), Expect = 3.820e-30
Identity = 104/336 (30.95%), Postives = 163/336 (48.51%), Query Frame = 1
Query:    1 KGLAFATVAGIPLLYGLYIVWMPPFIYSLFGMSIHVSFGPFALVGLFISDALGNRGYKPCDGLCRHDTEQTREYLEACTILTFMVSVWYFIMALLKLGEPLAILLADPVINGFVCASAILVANSQ---------------------AWEKRTAINWASVAVGVGSIVVYFTLRRCNAHLKSKGVTGFFVPEALSAVIVSTLFSWVVDLDGVYGVDIVGPIPPGLPPPRFPRLDKLTSLEMVEDFAGVALVAAIVAFIITHSIAKSLAGSTEIKATP--QLFAFGAANLVGSIFSSLPGSASLSRAAIIDALDARTIVHNVFTFALMTAVLLFLSPL 939
            +G+A+A +AG+P +YGLY   +P  +Y+LFG S H++ GP A+V L ++  +G     P  G           ++E   +L  MV +  F++ L + G  +   L+ PV+ GF  A+A+++  SQ                     A       + A++ VGVGSI+V   L+R N             P AL  V++ T   W        G+ IVG +P GLP    P  D    LEM++    VA+  A+V+F+ + ++AK  A     K  P  +L   G AN++GS+F S P +   SR A+ +   ART +  V + A++   LLFL+ L
Sbjct:   36 QGMAYALLAGLPPIYGLYASLVPLLVYALFGSSRHLAVGPVAMVSLLVAAGVG-----PLSG------GDAGTFVELSIVLALMVGIIQFVLGLARFGF-ITNFLSHPVLTGFTSAAALIIGFSQLKHLLGIDIERSSHVHEIVLSAAASIGGTHLATLLVGVGSILVILGLKRWNKTF----------PGALVVVVLGTTLVWYFGASAT-GIKIVGTVPGGLPSFYVPSFD----LEMIQALIPVAMTIALVSFMESIAVAKVYATKHRYKIDPNRELIGLGLANILGSVFQSFPTTGGFSRTAVNEQAGARTKIAAVISAAVIAVTLLFLTSL 344          
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Match: A0A2P6C037_9BACT (Sodium-independent anion transporter n=1 Tax=Salinibacter sp. 10B TaxID=1923971 RepID=A0A2P6C037_9BACT)

HSP 1 Score: 129 bits (325), Expect = 4.710e-30
Identity = 111/333 (33.33%), Postives = 169/333 (50.75%), Query Frame = 1
Query:    1 KGLAFATVAGIPLLYGLYIVWMPPFIYSLFGMSIHVSFGPFALVGLFISDALGNRGYKPCDGLCRHDTEQTREYLEACTILTFMVSVWYFIMALLKLGEPLAILLADPVINGFVCASAILVANSQAWEKRTAINWASVAVGVGSIVVYFTLRRC-----NAHLKSKGVTGF-------------FVPEALSAVIVSTLFSWVVDLDGVYGVDIVGPIPPGLPPPRFPRLDKLTSLEMVEDFAGVALVAAIVAFIITHSIAKSLAG--STEIKATPQLFAFGAANLVGSIFSSLPGSASLSRAAIIDALDARTIVHNVFTFALMTAVLLFLSPL 939
            +G+A+A +AG+P +YGLY   +P   Y LFG S H++ GP A+  L +   +G         L +  TE+   Y+    +LT MV +   +M +++LG  +A LL+ PVI G   A+A++++ SQ        N   + +G  S  V+  L+       + HL + G+ G               VPEAL  V  STL SW  +LD  YGV+I+G +P GLP P        +S   +     VA+  A+V F+   S+ +  A      I A  +L   GA+N  GS+F S+P S S SR+A+ D   A+T + N+F   ++   LLFL+PL
Sbjct:   44 QGMAYAVIAGMPPIYGLYAGLVPLLTYPLFGSSKHLALGPVAIDMLIVGAGIG--------ALAQAGTER---YVALAILLTAMVGLMQMMMGMMQLGF-VANLLSRPVIAGLTSAAALIISTSQLG------NLLGMELG-RSQYVHVLLQEALQNVASTHLLTLGIGGVCILTLILLPRWMPLVPEALVVVGGSTLASWFFELDE-YGVEIIGAVPTGLPRPEV----WASSFSDLNALLPVAITLALVQFMKNVSLGRVFAARHGYTIDANRELVGVGASNFFGSLFQSIPTSGSFSRSAVNDQAGAQTPLANIFAAIIIALTLLFLTPL 352          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17147.3987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPW1_ECTSI1.670e-16276.19Sulfate permease n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5L827_9PHAE4.520e-10975.00SulP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
UPI00064522B82.390e-3331.49hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI0003B3FE148.310e-3334.52sulfate permease n=1 Tax=Salisaeta longa TaxID=503... [more]
A0A7C5L862_9BACT2.380e-3131.25Solute carrier 26 family protein n=1 Tax=Phaeodact... [more]
A0A2E1AQH7_9FLAO2.280e-3031.75Sodium-independent anion transporter n=1 Tax=Muric... [more]
A0A1Q3H3A2_9BACT2.350e-3031.56Sodium-independent anion transporter n=2 Tax=Cytop... [more]
A0A6H5LEN1_9PHAE2.790e-3077.78SulP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A523GMD0_9BACT3.820e-3030.95Solute carrier 26 family protein n=1 Tax=Bacteroid... [more]
A0A2P6C037_9BACT4.710e-3033.33Sodium-independent anion transporter n=1 Tax=Salin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17147contigH-paniculata_contig17147:328..5377 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score476.5
Seed ortholog evalue9.8e-132
Seed eggNOG ortholog2880.D7FPW1
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.secondary active sulfate transmembrane transporter activity
EggNOG OGsCOG0659@1,KOG0236@2759
Ec32 ortholog descriptionSTAS domain
Ec32 orthologEc-01_008480.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size945
Cds size945
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929353.9615414-CDS-H-paniculata_contig17147:327..4281622929353.9615414-CDS-H-paniculata_contig17147:327..428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 328..428 -
1691480827.2875984-CDS-H-paniculata_contig17147:327..4281691480827.2875984-CDS-H-paniculata_contig17147:327..428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 328..428 -
1622929353.976471-CDS-H-paniculata_contig17147:1147..12411622929353.976471-CDS-H-paniculata_contig17147:1147..1241Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 1148..1241 -
1691480827.2981057-CDS-H-paniculata_contig17147:1147..12411691480827.2981057-CDS-H-paniculata_contig17147:1147..1241Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 1148..1241 -
1622929353.993741-CDS-H-paniculata_contig17147:2079..22761622929353.993741-CDS-H-paniculata_contig17147:2079..2276Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 2080..2276 -
1691480827.3073015-CDS-H-paniculata_contig17147:2079..22761691480827.3073015-CDS-H-paniculata_contig17147:2079..2276Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 2080..2276 -
1622929354.0124674-CDS-H-paniculata_contig17147:3054..32321622929354.0124674-CDS-H-paniculata_contig17147:3054..3232Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 3055..3232 -
1691480827.3162055-CDS-H-paniculata_contig17147:3054..32321691480827.3162055-CDS-H-paniculata_contig17147:3054..3232Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 3055..3232 -
1622929354.0488334-CDS-H-paniculata_contig17147:4125..41881622929354.0488334-CDS-H-paniculata_contig17147:4125..4188Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 4126..4188 -
1691480827.3250723-CDS-H-paniculata_contig17147:4125..41881691480827.3250723-CDS-H-paniculata_contig17147:4125..4188Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 4126..4188 -
1622929354.0828707-CDS-H-paniculata_contig17147:4506..46021622929354.0828707-CDS-H-paniculata_contig17147:4506..4602Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 4507..4602 -
1691480827.3364275-CDS-H-paniculata_contig17147:4506..46021691480827.3364275-CDS-H-paniculata_contig17147:4506..4602Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 4507..4602 -
1622929354.099325-CDS-H-paniculata_contig17147:5161..53771622929354.099325-CDS-H-paniculata_contig17147:5161..5377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 5162..5377 -
1691480827.3509462-CDS-H-paniculata_contig17147:5161..53771691480827.3509462-CDS-H-paniculata_contig17147:5161..5377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17147 5162..5377 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17147.3987.1prot_H-paniculata_contig17147.3987.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17147 328..5377 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17147.3987.1

>prot_H-paniculata_contig17147.3987.1 ID=prot_H-paniculata_contig17147.3987.1|Name=mRNA_H-paniculata_contig17147.3987.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=315bp
KGLAFATVAGIPLLYGLYIVWMPPFIYSLFGMSIHVSFGPFALVGLFISD
ALGNRGYKPCDGLCRHDTEQTREYLEACTILTFMVSVWYFIMALLKLGEP
LAILLADPVINGFVCASAILVANSQAWEKRTAINWASVAVGVGSIVVYFT
LRRCNAHLKSKGVTGFFVPEALSAVIVSTLFSWVVDLDGVYGVDIVGPIP
PGLPPPRFPRLDKLTSLEMVEDFAGVALVAAIVAFIITHSIAKSLAGSTE
IKATPQLFAFGAANLVGSIFSSLPGSASLSRAAIIDALDARTIVHNVFTF
ALMTAVLLFLSPLLE
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mRNA from alignment at H-paniculata_contig17147:328..5377-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17147.3987.1 ID=mRNA_H-paniculata_contig17147.3987.1|Name=mRNA_H-paniculata_contig17147.3987.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5050bp|location=Sequence derived from alignment at H-paniculata_contig17147:328..5377- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGGACTAGCATTTGCGACGGTGGCCGGGATTCCGCTCCTCTACGGCCT TTACATTGTATGGATGCCTCCCTTCATCTATTCTCTGTTCGGCATGAGCA TCCACGTGAGCTTTGGGCCCTTCGCACTTGTCGGTCTCTTCATCAGCGAC GCCCTGGGGAATAGGGGATACAAACCTTGCGATGGCTTATGCCGCCATGA TACTGAGCAGACCCGGGTGAGAAGTCTGCACCTCCATTTTTTTTCACTAG CAAGGTTGGGGGGTGTCCCGTGGCGAGGGGGATTAGAGGCTTGTTGCGTT TTAAGCAGTATGTTGAGAAGGCTCTCATGAGTTGGGGCCATTTGTAGATG GATAATATTGTGCGTATGTGTAATCCCGCTCACTAGCTCGTGTGTTGAGA ATTATGTGTTTGTGAATACGATGATCCCATGCTAGACTTGCTCCCGCGGG TGCTGCTCTCGGCCTCTGTTATTGAGTCTAGGTTCGAGGATGTATGGTGT GTACACACAGCCTCACTCTCAATGGACATGAGATCTGTTGGGTTAAAAAA ATCTTGCGAGTCGTTACAATTTATCTCGCAGAACGCTAATTGATTTTTTA TCCTTTAGTCGGGGCTTGGAAACGTTAGGGACGTTGGGGATATGCTCTTC ACAAGGGATTTAGTTCTGTACCGATTTTGATAGTTTGTAACCGATCAGTG TGTTACTGAGTACTCGGGTGAATAAATAGCTCCCGGTACTCGTTTTGATT TGTGTTTCTTGATGATGGCCGGCAGGAGTACCTGGAAGCCTGCACGATAC TAACGTTCATGGTGAGCGTGTGGTACTTCATCATGGCCCTGTTGAAGCTG GGAGAGCCGCTGGCCATTCTGGTGAGTCATCGTGAGTACACAAACACTGT CACGTTATGATGAATCACATGGGGGAAAATGCTCCTGAGGTTAACGGGTA GTCGGTTCTTTTCGCTGAGAACTCTATACAATGTAGCTGGCAGTCGCTCG CTCATGAATGCTATTGCTCCGTTTTATGATGTCTTCCCGTGGCACTTAAC CTGGCATCGCTTTCGTTGATTTCTGTCACCCTCTCTCCCTTTTCCGTGCC TGCGTTTCGATCCTTCGGTTTTACATCTTGTTTTCTTGTTGCTCGTCCGC AATGTTGTTTTCGGCAACAACAACAAACTCGAACGACAGCTGGCTGATCC TGTCATAAACGGGTTCGTTTGTGCGAGTGCCATACTGGTGGCCAATTCTC AGGTGACGGGCTGAACGTGGGAACTCGGGATACCCCGATATTGGTTACTT TTCAATTTGTTATCCTTGATATTCGTCCGATGTTGCCCTCTATCGTAAGG TGATAATACCGTAATATTCATGTGTGCTTCGCTGCTGGGCCGATTGACGG CGACTGGTGGCCCAACTTCCCCACCCCCTGATCTCTTGAAGGTTATTTGA GGACCCAACCCCTCACTTCACCCGCCAACTGTCCACCCGCGTGTACGCCA TCCTGTCGATTGGTGCAAGTCCAGGTGTGCACGTTCCTGCAGATTCAGCA CACAGATGGGCGAAATTCGGGTGTCGTGGGAACGCTGTTACAGGCAAGAG GGCGAGGGAGAGGGGCGTGTGTGTGGGTGTGTGTGTGAGAGAGAGAGAGA CAAAAACATTCGACAGTATAAGGGTGGAACATCTTCGATATCGTAGATGG TAGTAAACTCACTAGTAGTGGTGGATGATGACAGGGTAATGGTGGGAAAT AGGCAATACATATGGATGGGGGCGGGGGGCGGGGGGATAAAAGGATCAGT GGAGCATATTGCTACTGCGATACTGCAGTTTGTGTAGCGGACAATCCAAT CCATCCCTCTGTCAATGGTCCGTGCCGGTGTTGAAAATTTGACCGCTGTA CTTATCTTTGCGATCCTCTCCGCACACCGTCTGTTGAATAATACACCCGT ATTAGGCATGAAAATCGGGCAGGCTCCAGGAAATTACCAAGCCCTCGGGA TGTTTTCAGGCCTTCAAATACTAGGCCGTACGAATGCCCCTCCTTAAATA TTCATGCGTTTTTGGCAATGACACGCGATGATGCATTTTGAGCCCCCCTA TTGACCGTCCGCTCTTACGTTGTGTGTTCGGTTGGGATTGTGTAGGCGTG GGAAAAGCGCACCGCCATCAATTGGGCATCTGTTGCGGTGGGCGTGGGGT CGATAGTGGTCTACTTTACCCTCCGGCGCTGCAACGCCCACCTCAAGAGC AAAGGCGTCACCGGCTTTTTTGTACCCGAGGCGCTGTCGGCAGTCATCGT ATCCACGCTGTTCTCCTGGGTTGGTGAGTCTCGTCGTGTTCAATTTGAAC GCGATTGCATGAAGGAAAGTAATGACGTTACCAATATCTGTTGGATGAAA AACTGAATCCATTTAGCACTCTGGAGAGTCGGGGAGTTGTTGTAGAGAAA TACAAGAGGTTGGCGGGTTACATACGTTTAGTTCTTGTTGCTGTTCGTTT TTTCTCGCGGCAAAAACTTGTATCGTTCTGTCAGGGTTTTGCTGATCATT TCAAAAACGGATTTCGATCTTGCTTACTCCCGCCTAGTGTTTGGTTTCGC TCAATTGTTTGTACCTCTTGCAACCGATATTTCACTCGTCGGACAAAACC AGTTTGTAAATCGTCTGTCGATTTTAAGAAACATGCGCGAAACGTCCTGT AAATTATGTGTCTGCTCAAGGCGGACAGACCGCTTTACGACGGAACGTTG GTCATTATTTGCTTGATTCAGACCAGCTTTCTCAAACTGTGGTCAGAACG TCTAAAAGTGTATAAGATGCGTTCTTGGATATTTTATATAATCTGAGATG CTCAACTAAAATATGACACAATGACAAAAGTAGAAAATCTTGAGAGAAAA AAACAAAAAAACAAAAAAAAACTCATGAGCTGGTTTTGTTCTGTCGGATG TGTATGTTTGCGTGTAAATGGCGTATCTTGGTTACCCTATCTTCTCCCTC CTCGCCCACGCGCGGCCAAACACATTTGCGCACGTAAAACAAACACGAAG CCGGTTTGTTTTGTCTCTCCGTTCCGTTTTCCGATTTTTTCCCCCCTAAA GTCGACCTTGATGGGGTATACGGAGTAGACATTGTGGGGCCGATTCCGCC CGGGCTTCCGCCTCCGCGGTTTCCTCGTCTTGATAAGCTCACGTCGCTGG AGATGGTGGAGGATTTTGCTGGGGTAGCGCTCGTTGCAGCGATCGTGGCG TTCATCATAACCCATAGCATTGCCAAGAGCCTCGCCGGGTCGACGGAGGT ACGCGCTCTCCTCCACTCGCTCCCTGCCCCTCCCTAATTTTGTCCGTCCC TCCGCTCTCGGCCTTCTCTTGCATGTGGTGTGTTATGGGAGTTTTTTTTT TTTTTTTTTGTCATTTGTCAATGTTTTTGTTGGTCCCTAGAAGCAGTTTG TGTCTGTACAACGTTTTATTGTCTAGTCTCTCTTTATGTGCTTGATTGTT TGTTTGTTTGTTTTCGAGCGTTGATGTGTGCTTTATCGACGTTTGTTTTT GGCGACTGTCGGGTTGGCGAGTGCGTGAGTGAGTGAGGTACATGCTACCC GAGAAACCGAGTGCGTCATGAAGGCTACAGCGGTATATACAGTGTACGCT GGCCCTATGCGGGATGAGAGAACGTGCGAGCACAAGCGCTGTTAACACAT ATTCGCAGTTGAATTGGTGCGCTCTGAAAAGTTCTGAAACGTAGAAAAAC TGCCTTTAGGTGTGTTTGGTTGCTTTTGCAGATATGCTGCTGTTATCACG TAAATGGACAACATTGTAGACAAGTTATCTCGCCTTTCTGAACGAAGGAG ATGATGAATACGCTCAGCATTATGGGTGCTTTGTGGTGCTCGTATTCCAT GGCCTATGGTATGAGTATATCTGGACTGATTTTGAGAGTGGACCGTTAGG CTCTTTCTCCACTGGCGCCCACTTTGTTCCCGGACGTCGGCTCAGCTTGA GGCCAAGAAAAATAGCACGCCGCTCATCTTTCTTGCGTGTATGCGTTTAT GTGTGTGTGTTTCTCCACTCACGTTATCGTCTCGTCTTGCTTCGTTTTGC GTTGTTACGCTGTTTTTGGCGTCGAGGTACGCACAGATCAAGGCAACCCC TCAGCTCTTCGCTTTCGGGGCCGCGAACCTTGTGGGGTCTATTTTCTCGT CTTTGCCGGGATCGGCCTCTTTAAGCCGTGGTAAGCTAACGTGTCAAAAC CGAAGTTATTAAAAAGTCATGAACGCGTCGTTTTTCTATTTTGGGGGAGG TTGTACAGTGGCCTCAATATAGTAGTTTTTATCAACGAATCACAAATATC GACTAGGTTGAAACTCTAAGGATTGAGGAAGCGAAAGTCGAGAAAACGTT CGCGGTGACTGTCTACTTGGCAGCGGCGGTAGGTGTGTGTTCAACACGCG GGGGGGGGGCATTTTCTTCACCGCAGCATAGAATTTTGGGGGAAAAACAA AAATGAAGGAAATACACTCTTTGAACAAGTGGAGGATGCAGTTGAATAGG GGTGTTGTTTTTCTCTGTTGGCTAGGACTGACTGAAGAAGGATACATTCT CTGAAGGAAGAAATCGTTATGCTTGATCGAGCTTCATGTCTGCTGCAGCA CGGATGTGGTGTATTAACCCAATGTGTGGTGGCTTGGCATGCGTTGAAAC AATGTGGCAACAATAGTGAAGGATCCACTGCGGTCTTATGCTTTTAGCAA ATTTGAAATGCACAATCCGCACCTTCGTTTTGTGTGTGTTTTTATTACCC GTTTTTTACCGATTGATTCTCGTTTACTGCTGCTATCGCTCCGGCGACCG GTGTTGGTTTTCTGATCACGTGGACCTCCTCCCCCTTTCCTCTCCCCTCC CTCCCCTCTGTATGGAACAAACGCACCACACCGTGTAACACCGAAACAGC GGCCATCATCGATGCTCTTGACGCACGTACCATCGTGCACAACGTATTCA CGTTCGCTCTCATGACCGCGGTGCTGCTCTTCCTCAGCCCACTGCTAGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig17147:328..5377-

>mRNA_H-paniculata_contig17147.3987.1 ID=mRNA_H-paniculata_contig17147.3987.1|Name=mRNA_H-paniculata_contig17147.3987.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1890bp|location=Sequence derived from alignment at H-paniculata_contig17147:328..5377- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGGACTAGCATTTGCGACGGTGGCCGGGATTCCGCTCCTCTACGGCCT
TTACATTGTATGGATGCCTCCCTTCATCTATTCTCTGTTCGGCATGAGCA
TCCACGTGAGCTTTGGGCCCTTCGCACTTGTCGGTCTCTTCATCAGCGAC
GCCCTGGGGAATAGGGGATACAAACCTTGCGATGGCTTATGCCGCCATGA
TACTGAGCAGACCCGGAAGGGACTAGCATTTGCGACGGTGGCCGGGATTC
CGCTCCTCTACGGCCTTTACATTGTATGGATGCCTCCCTTCATCTATTCT
CTGTTCGGCATGAGCATCCACGTGAGCTTTGGGCCCTTCGCACTTGTCGG
TCTCTTCATCAGCGACGCCCTGGGGAATAGGGGATACAAACCTTGCGATG
GCTTATGCCGCCATGATACTGAGCAGACCCGGGAGTACCTGGAAGCCTGC
ACGATACTAACGTTCATGGTGAGCGTGTGGTACTTCATCATGGCCCTGTT
GAAGCTGGGAGAGCCGCTGGCCATTCTGGAGTACCTGGAAGCCTGCACGA
TACTAACGTTCATGGTGAGCGTGTGGTACTTCATCATGGCCCTGTTGAAG
CTGGGAGAGCCGCTGGCCATTCTGCTGGCTGATCCTGTCATAAACGGGTT
CGTTTGTGCGAGTGCCATACTGGTGGCCAATTCTCAGCTGGCTGATCCTG
TCATAAACGGGTTCGTTTGTGCGAGTGCCATACTGGTGGCCAATTCTCAG
GCGTGGGAAAAGCGCACCGCCATCAATTGGGCATCTGTTGCGGTGGGCGT
GGGGTCGATAGTGGTCTACTTTACCCTCCGGCGCTGCAACGCCCACCTCA
AGAGCAAAGGCGTCACCGGCTTTTTTGTACCCGAGGCGCTGTCGGCAGTC
ATCGTATCCACGCTGTTCTCCTGGGTTGGCGTGGGAAAAGCGCACCGCCA
TCAATTGGGCATCTGTTGCGGTGGGCGTGGGGTCGATAGTGGTCTACTTT
ACCCTCCGGCGCTGCAACGCCCACCTCAAGAGCAAAGGCGTCACCGGCTT
TTTTGTACCCGAGGCGCTGTCGGCAGTCATCGTATCCACGCTGTTCTCCT
GGGTTGTCGACCTTGATGGGGTATACGGAGTAGACATTGTGGGGCCGATT
CCGCCCGGGCTTCCGCCTCCGCGGTTTCCTCGTCTTGATAAGCTCACGTC
GCTGGAGATGGTGGAGGATTTTGCTGGGGTAGCGCTCGTTGCAGCGATCG
TGGCGTTCATCATAACCCATAGCATTGCCAAGAGCCTCGCCGGGTCGACG
GAGTCGACCTTGATGGGGTATACGGAGTAGACATTGTGGGGCCGATTCCG
CCCGGGCTTCCGCCTCCGCGGTTTCCTCGTCTTGATAAGCTCACGTCGCT
GGAGATGGTGGAGGATTTTGCTGGGGTAGCGCTCGTTGCAGCGATCGTGG
CGTTCATCATAACCCATAGCATTGCCAAGAGCCTCGCCGGGTCGACGGAG
ATCAAGGCAACCCCTCAGCTCTTCGCTTTCGGGGCCGCGAACCTTGTGGG
GTCTATTTTCTCGTCTTTGCCGGGATCGGCCTCTTTAAGCCGTGATCAAG
GCAACCCCTCAGCTCTTCGCTTTCGGGGCCGCGAACCTTGTGGGGTCTAT
TTTCTCGTCTTTGCCGGGATCGGCCTCTTTAAGCCGTGCGGCCATCATCG
ATGCTCTTGACGCACGTACCATCGTGCACAACGTATTCACGTTCGCTCTC
ATGACCGCGGTGCTGCTCTTCCTCAGCCCACTGCTAGAGCGGCCATCATC
GATGCTCTTGACGCACGTACCATCGTGCACAACGTATTCACGTTCGCTCT
CATGACCGCGGTGCTGCTCTTCCTCAGCCCACTGCTAGAG
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