prot_H-paniculata_contig17139.3982.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17139.3982.1
Unique Nameprot_H-paniculata_contig17139.3982.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length140
Homology
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Match: D8LU68_ECTSI (Heat Shock transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU68_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 6.040e-32
Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = 0
Query:    1 MPRCFKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKVRRGFFPDVPPEFAYDVHG 68
            MPR FKQNK+SSFQRQLNLYGFRKLVRG EAGGYMHPLFE+GK  QLS+VRRGFFP++PPEFA+DVHG
Sbjct:   90 MPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEIPPEFAHDVHG 157          
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Match: A0A6H5JLW3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW3_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.920e-29
Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 MPRCFKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKVRRGFFPD------VPPEFAYDVHG 68
            MPR FKQNK+SSFQRQLNLYGFRKLVRG EAGGYMHPLFE+GK  QLS+VRRGFFP+      +PPEFA+DVHG
Sbjct:   67 MPRFFKQNKYSSFQRQLNLYGFRKLVRGNEAGGYMHPLFERGKPEQLSQVRRGFFPEEEAFPQIPPEFAHDVHG 140          
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Match: A0A835YPY0_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPY0_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.060e-21
Identity = 43/85 (50.59%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    1 MPRCFKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKVRRGFFPDVPPEFAYDVHGGFGEPTSSAGDGAEADT 85
            +P+ FK +KFSSFQRQLNLYGFRK+VRG E+GGYMH  F++G+   L  V+RG+ P  PPE+   ++G     + + G+ +EAD+
Sbjct:   29 LPKHFKHDKFSSFQRQLNLYGFRKIVRGRESGGYMHKDFQRGRLDLLKHVKRGYMPPCPPEYEKKIYG-----SGARGEDSEADS 108          
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Match: A0A835Z533_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z533_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.420e-21
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 MPRCFKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKVRRGFFPDVPPEFAYDVHGGFG 71
            +P  FK +KFSSFQRQLNLYGFRK+VRG EAGGYMH  F++G+A  L  VRRG  P  PP++   ++G  G
Sbjct:   40 LPTHFKHDKFSSFQRQLNLYGFRKIVRGKEAGGYMHKDFQRGRADLLPHVRRGHMPPCPPQYERKIYGSGG 110          
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Match: A0A835Z0U6_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U6_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 5.030e-18
Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    1 MPRCFKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKVRRGFFPDVPPEFAYDVHG 68
            +P+ FK +KFSSFQRQLNLYGFRK+V+G E+G Y+H  F +G    L +VRRG  P  PP + + V+G
Sbjct:   42 LPQYFKHDKFSSFQRQLNLYGFRKIVKGNESGCYIHTYFRRGHPELLKQVRRGQMPPCPPRYEHKVYG 109          
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Match: A0A6H5L4Y2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y2_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 6.340e-18
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    5 FKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKVRRGFFPDVPPEFAYDVHG 68
            FK NKFSSFQRQLNLYGFRK+V+G E+G YMHP+F + +   LS+VRRG  P  PPE+   V+G
Sbjct:   49 FKHNKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPDLLSEVRRGIVPPCPPEYTRKVYG 112          
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Match: D7FI12_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI12_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 8.280e-18
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    5 FKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKVRRGFFPDVPPEFAYDVHG 68
            FK NKFSSFQRQLNLYGFRK+V+G E+G YMHP+F + +   LS+VRRG  P  PPE+   V+G
Sbjct:   68 FKHNKFSSFQRQLNLYGFRKIVKGRESGCYMHPMFLRDRPELLSEVRRGVVPPCPPEYTRKVYG 131          
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Match: A0A835YN41_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN41_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.110e-16
Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 0
Query:    1 MPRCFKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKVRRGFFPDVPPEFAYDVHGGFGEPTSSAG 78
            +P+ FK +KFSSFQRQLNLYGFRK+V+G E+G Y+H  F++G    L +VRRG  P  PP +   V+G    P   AG
Sbjct:   62 LPQYFKHDKFSSFQRQLNLYGFRKIVKGRESGCYIHCYFQRGHPELLKQVRRGQVPPCPPRYERKVYGCSTRPRQGAG 139          
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Match: A0A6H5KNL3_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNL3_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 8.680e-15
Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = 0
Query:    5 FKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKVRRGFFPDVPPEFAYDVHG 68
            FK NKFSSFQRQLNLYGFRK+V+G E+G YMHP F +    +L++V+RG  P  PP ++  ++G
Sbjct:   49 FKHNKFSSFQRQLNLYGFRKVVKGRESGCYMHPSFLRDSPEKLTEVKRGVVPPCPPCYSRKIYG 112          
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Match: A0A6H5JIP5_9PHAE (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIP5_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.330e-13
Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    5 FKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKVRRGFFPDVPPEFAYDVHG 68
            F+ NKFSSF+RQLNLYG+RK+++G +AG YMHP F++G+   L +V++G  P        ++HG
Sbjct:   95 FRHNKFSSFRRQLNLYGYRKVIKGPDAGAYMHPFFQRGRPELLGEVKKGKVPHYEMHGVNEIHG 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17139.3982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU68_ECTSI6.040e-3285.29Heat Shock transcription factor (Partial) (Fragmen... [more]
A0A6H5JLW3_9PHAE1.920e-2978.38HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A835YPY0_9STRA1.060e-2150.59HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A835Z533_9STRA2.420e-2159.15HSF-type DNA-binding-domain-containing protein (Fr... [more]
A0A835Z0U6_9STRA5.030e-1854.41HSF-type DNA-binding-domain-containing protein (Fr... [more]
A0A6H5L4Y2_9PHAE6.340e-1862.50HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D7FI12_ECTSI8.280e-1862.50Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
A0A835YN41_9STRA1.110e-1651.28HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A6H5KNL3_9PHAE8.680e-1556.25HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
A0A6H5JIP5_9PHAE1.330e-1348.44HSF_DOMAIN domain-containing protein (Fragment) n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..54
e-value: 2.0E-12
score: 49.2
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 1..52
e-value: 3.8E-11
score: 43.5
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 1..107
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17139contigH-paniculata_contig17139:1256..3715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17139.3982.1mRNA_H-paniculata_contig17139.3982.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17139 216..4382 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17139.3982.1 ID=prot_H-paniculata_contig17139.3982.1|Name=mRNA_H-paniculata_contig17139.3982.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=140bp
MPRCFKQNKFSSFQRQLNLYGFRKLVRGVEAGGYMHPLFEKGKAGQLSKV
RRGFFPDVPPEFAYDVHGGFGEPTSSAGDGAEADTADNALRRRRKLDCQR
QRRHRQSDSQGKRRKRAGGGAATGGSANGSSATGVSKTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR000232HSF_DNA-bd
IPR027725HSF_fam
IPR036390WH_DNA-bd_sf