prot_H-paniculata_contig17124.3979.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17124.3979.1
Unique Nameprot_H-paniculata_contig17124.3979.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length91
Homology
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Match: A0A8H7NVE6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NVE6_9APHY)

HSP 1 Score: 70.1 bits (170), Expect = 4.800e-12
Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 0
Query:    3 VERPNNKLVVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID 90
            VE+P    VV  + + ++K  E+  V K+K RL A G  Q+ G  + Q + P    AS +++L +AA  DWE+  +DF+ AYL   +D
Sbjct:  255 VEKPKGANVVGCVWVLRKKRDENNEVAKFKARLCAQGFSQVHGVDYDQTAAPTARLASLRLVLALAAANDWEVHQIDFKNAYLNGDLD 342          
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Match: A0A8H7TXH5_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7TXH5_9APHY)

HSP 1 Score: 69.7 bits (169), Expect = 6.710e-12
Identity = 31/88 (35.23%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    3 VERPNNKLVVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID 90
            VE P +  +V ++ + K+K  E  NV K+K RL A G  Q+ G  + + + P  + +S +++L +AA  DWE+  +DF+ AYL   +D
Sbjct:  751 VEPPKDVNIVGSVWVLKKKRDEHNNVAKFKARLCAQGFSQVYGIDYVETAAPTASLSSLRLVLALAAANDWEIHQIDFKNAYLNGDLD 838          
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Match: A0A6A3A122_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A122_HIBSY)

HSP 1 Score: 65.1 bits (157), Expect = 2.840e-10
Identity = 31/88 (35.23%), Postives = 47/88 (53.41%), Query Frame = 0
Query:    3 VERPNNKLVVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID 90
            V+ P  ++ V    L+K K   DG+V++YK RL A G  Q+  + F     P    ++  ++L +A   DWELRHVD   A+L   +D
Sbjct:  936 VKLPAGRIPVGCKWLFKLKRNPDGSVNRYKARLIAKGYSQVTSYDFTDMFSPVLKFSTFNVVLALAVSNDWELRHVDVNNAFLNGDLD 1023          
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Match: A0A4S4M1W0_9APHY (Uncharacterized protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1W0_9APHY)

HSP 1 Score: 65.1 bits (157), Expect = 2.840e-10
Identity = 32/89 (35.96%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    3 VERPNNKL-VVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID 90
            VERP + + VV + ++ + K    G +DKYK RL A G  Q+ G  + +   P    +S +++L IAA  +W+++  DF  AYL +P+D
Sbjct: 1189 VERPPDDVNVVDSKIVLRVKKNAAGEIDKYKARLVARGFTQVHGVDYFETFAPVAKLSSFRLLLAIAARNNWDIKSFDFSSAYLNSPLD 1277          
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Match: A0A4S4LP48_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LP48_9AGAM)

HSP 1 Score: 64.7 bits (156), Expect = 3.840e-10
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 0
Query:    3 VERPNNKLVVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID 90
            V+RP N  VV +  ++K K G  G + KYK RL A G  Q+ G  +     P     S +++L IAA  DWE+  +D + AYL   ++
Sbjct:  827 VDRPPNTNVVGSKWVFKVKRGSAGEIVKYKARLVAQGFTQVPGIDYTDTFVPIAKLDSIRVLLAIAARNDWEVHQMDVKNAYLNGHLE 914          
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Match: UPI000900A916 (uncharacterized protein LOC109132671 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000900A916)

HSP 1 Score: 63.9 bits (154), Expect = 4.430e-10
Identity = 27/85 (31.76%), Postives = 48/85 (56.47%), Query Frame = 0
Query:    6 PNNKLVVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID 90
            P  K V+ +  +++ K   DGN+++YK RL A GN+QI+G  ++    P     + +  L +A+++ WEL  +D   A+L   +D
Sbjct:   20 PPGKHVIGSQWVFRIKYRADGNIERYKARLVALGNKQIEGVDYKDTFSPVIKMTTVRAFLGVASVRGWELHQMDVHNAFLHGDLD 104          
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Match: A0A445H2V6_GLYSO (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445H2V6_GLYSO)

HSP 1 Score: 64.3 bits (155), Expect = 5.090e-10
Identity = 27/85 (31.76%), Postives = 46/85 (54.12%), Query Frame = 0
Query:    6 PNNKLVVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID 90
            P +K  +    +YK K   DG++++YK RL A G  Q++G  +    FP     + +++L +AA+  W LR +D   A+L   +D
Sbjct:   44 PPHKTAIGCRWIYKIKHRVDGSIERYKARLVAKGYTQMEGLDYLDTFFPVAKLTTVRLLLALAALNQWHLRQLDVNNAFLHGELD 128          
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Match: A0A6A2ZY21_HIBSY (Aminomethyltransferase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZY21_HIBSY)

HSP 1 Score: 64.3 bits (155), Expect = 5.280e-10
Identity = 31/88 (35.23%), Postives = 47/88 (53.41%), Query Frame = 0
Query:    3 VERPNNKLVVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID 90
            V+ P  ++ V    L+K K   DG+V++YK  L A G  Q+ G+ F     P    ++  ++L +A   DWELRHVD   A+L   +D
Sbjct:  750 VKLPACRIPVGCKWLFKLKRNLDGSVNRYKASLIAKGYSQVSGYDFTDTFSPVVKFSTFNVVLALAVSNDWELRHVDVNNAFLNGDLD 837          
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Match: A0A4Y1QYH0_PRUDU (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QYH0_PRUDU)

HSP 1 Score: 63.9 bits (154), Expect = 7.190e-10
Identity = 30/88 (34.09%), Postives = 49/88 (55.68%), Query Frame = 0
Query:    3 VERPNNKLVVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID 90
            V  P +K ++ +  +YK K   DG+V +YK RL A G  Q  GF F +   P     + +++L IAA+  W+LR +D + A+L   ++
Sbjct:  586 VPSPGDKNIIGSKWVYKIKRNPDGSVGRYKARLVAQGFSQEPGFDFGETFSPVVRHTTVRLVLSIAAMNQWKLRQLDVKNAFLHGDLE 673          
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Match: A0A146H565_MYCCL (Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H565_MYCCL)

HSP 1 Score: 63.9 bits (154), Expect = 7.260e-10
Identity = 31/88 (35.23%), Postives = 47/88 (53.41%), Query Frame = 0
Query:    3 VERPNNKLVVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID 90
            V RP+ + VV    + + K    G ++KYK RL A G  Q++G  + +   P    AS +++L IAA  DW++   DF  AYL   +D
Sbjct: 1097 VPRPSGRNVVDCKWVLRIKKNAAGEIEKYKARLVARGFTQVQGVDYYETFAPTAKIASIRLVLAIAARNDWDIDMFDFNSAYLNGELD 1184          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17124.3979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H7NVE6_9APHY4.800e-1236.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7TXH5_9APHY6.710e-1235.23Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3A122_HIBSY2.840e-1035.23Integrase catalytic domain-containing protein n=1 ... [more]
A0A4S4M1W0_9APHY2.840e-1035.96Uncharacterized protein (Fragment) n=1 Tax=Antrodi... [more]
A0A4S4LP48_9AGAM3.840e-1036.36Integrase catalytic domain-containing protein n=1 ... [more]
UPI000900A9164.430e-1031.76uncharacterized protein LOC109132671 n=1 Tax=Camel... [more]
A0A445H2V6_GLYSO5.090e-1031.76Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A2ZY21_HIBSY5.280e-1035.23Aminomethyltransferase n=1 Tax=Hibiscus syriacus T... [more]
A0A4Y1QYH0_PRUDU7.190e-1034.09Integrase catalytic domain-containing protein (Fra... [more]
A0A146H565_MYCCL7.260e-1035.23Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..90
e-value: 6.5E-13
score: 48.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17124contigH-paniculata_contig17124:4303..4575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17124.3979.1mRNA_H-paniculata_contig17124.3979.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17124 4171..4575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17124.3979.1 ID=prot_H-paniculata_contig17124.3979.1|Name=mRNA_H-paniculata_contig17124.3979.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bp
MQVERPNNKLVVSTMMLYKRKIGEDGNVDKYKCRLFAHGNRQIKGFHFQQ
ASFPAPAAASTKMMLLIAAIQDWELRHVDFEQAYLQAPID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2