prot_H-paniculata_contig17113.3974.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17113.3974.1
Unique Nameprot_H-paniculata_contig17113.3974.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length50
Homology
BLAST of mRNA_H-paniculata_contig17113.3974.1 vs. uniprot
Match: A0A6H5KPX0_9PHAE (Mon2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX0_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.090e-14
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    1 PQLRNCAVNTLFSAAVGNGGSLTEEEWKQFLLDVTFPLIEKVSSSS 46
            P+LRNCAVNTLFSAAVGNG  L+E +WKQFL +VTFPLIE+V  S+
Sbjct:  480 PELRNCAVNTLFSAAVGNGDGLSESDWKQFLQEVTFPLIEQVLEST 525          
BLAST of mRNA_H-paniculata_contig17113.3974.1 vs. uniprot
Match: D8LQH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH8_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 2.090e-14
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    1 PQLRNCAVNTLFSAAVGNGGSLTEEEWKQFLLDVTFPLIEKVSSSS 46
            P+LRNCAVNTLFSAAVGNG  L+E +WKQFL +VTFPLIE+V  S+
Sbjct: 1407 PELRNCAVNTLFSAAVGNGDGLSESDWKQFLQEVTFPLIEQVLEST 1452          
BLAST of mRNA_H-paniculata_contig17113.3974.1 vs. uniprot
Match: A0A835YQS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.010e-11
Identity = 24/42 (57.14%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    1 PQLRNCAVNTLFSAAVGNGGSLTEEEWKQFLLDVTFPLIEKV 42
            P++RNCA+NTLFSA +GNG + ++++W+Q+LL+VTFPL+ +V
Sbjct: 1186 PEVRNCAINTLFSALIGNGSTFSDQQWQQYLLEVTFPLLGEV 1227          
BLAST of mRNA_H-paniculata_contig17113.3974.1 vs. uniprot
Match: A0A6G0X7J0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7J0_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 1.410e-5
Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    1 PQLRNCAVNTLFSAAVGNGGSLTEEEWKQFLLDVTFPLIEKVSS 44
            P++RNCA+NTLF  AV +G +   EEW  FL     PL E+++S
Sbjct:  987 PEVRNCAINTLFGTAVTHGANFRLEEWTTFLQGTVLPLAEELAS 1030          
BLAST of mRNA_H-paniculata_contig17113.3974.1 vs. uniprot
Match: A0A1V9Z8H9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z8H9_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 9.250e-5
Identity = 22/47 (46.81%), Postives = 28/47 (59.57%), Query Frame = 0
Query:    1 PQLRNCAVNTLFSAAVGNGGSLTEEEWKQFLLDVTFPLIEKVSSSST 47
            P++RNCA+NTLF  AV +G      EWK F+ D   PL  K+S   T
Sbjct: 1018 PEVRNCAINTLFGMAVTHGSQFGLVEWKLFIEDTVLPLGTKLSVQVT 1064          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17113.3974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KPX0_9PHAE2.090e-1473.91Mon2_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LQH8_ECTSI2.090e-1473.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YQS4_9STRA7.010e-1157.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6G0X7J0_9STRA1.410e-547.73Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9Z8H9_9STRA9.250e-546.81Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17113contigH-paniculata_contig17113:254..403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17113.3974.1mRNA_H-paniculata_contig17113.3974.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17113 254..403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17113.3974.1 ID=prot_H-paniculata_contig17113.3974.1|Name=mRNA_H-paniculata_contig17113.3974.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=50bp
PQLRNCAVNTLFSAAVGNGGSLTEEEWKQFLLDVTFPLIEKVSSSSTVLS
back to top