mRNA_H-paniculata_contig17105.3972.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Match: D8LE38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE38_ECTSI) HSP 1 Score: 265 bits (677), Expect = 4.240e-88 Identity = 122/163 (74.85%), Postives = 142/163 (87.12%), Query Frame = 1
Query: 1 ANTLVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGSPQRILPSLPGIMRAIRTAISCKNPELLVFTCTALCTLASGNKEVGAALVPHYKMFLNVFNMFVNVVKNTGDKIDYGQRNRQDIGEAITATLETLERYGGKYSFARIKQCIPT 489
A+ LVWVCPLEQLDY YYLPMFFDGIRCLE+PC TLARQGV DLL AA+G PQRILPSLP IMRA+R AISCKNP +++F C+AL LA+GNKEVG ALV +YKMFL+VFN+F+N K+TGDKIDYGQRN QD+GEA++ T+ETLER GGK++FA IK CIPT
Sbjct: 39 ASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGYPQRILPSLPNIMRALRVAISCKNPGVIIFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDVGEAVSCTVETLERNGGKHAFAHIKHCIPT 201
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Match: A0A7S2Y192_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y192_9STRA) HSP 1 Score: 176 bits (446), Expect = 8.930e-51 Identity = 81/162 (50.00%), Postives = 113/162 (69.75%), Query Frame = 1
Query: 10 LVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGSPQRILPSLPGIMRAIRTAISCKNPELLVFTCTALCTLASGNKEVGAALVPHYKMFLNVFNMFVNVVKNTGDKIDYGQRNRQDIGEAITATLETLERYGGKYSFARIKQCIPTCE 495
L+W+CPL+ LDY +YLPMFF+GIRC EDP K +A QGV +LL+A+KG P+RILP+LP +++ +R A+ K P++++ + +L N +G A+VP+Y+ L+VFN+F +N GD +DYGQR DI I TLE LER GG+ SFA IK +PT E
Sbjct: 232 LLWICPLQTLDYEHYLPMFFEGIRCTEDPYKYMASQGVMELLDASKGYPERILPTLPEVVKYLRMALMSKLPDIIITALRCIQSLVLCNVGIGEAMVPYYRQLLSVFNLFRGKRRNLGDGMDYGQRKGDDINSVIDETLEVLERTGGEDSFANIKYMVPTYE 393
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Match: A0A835YJW5_9STRA (Parkin co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJW5_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.590e-47 Identity = 84/164 (51.22%), Postives = 105/164 (64.02%), Query Frame = 1
Query: 4 NTLVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGSPQRILPSLPGIMRAIRTAISCKNPELLVFTCTALCTLASGNKEVGAALVPHYKMFLNVFNMFVN--VVKNTGDKIDYGQRNRQDIGEAITATLETLERYGGKYSFARIKQCIPT 489
LVWVCPL+QLDY+YYLP+F DGIRC DPCK LARQG+ DLL AA G+P+R++P L I A+R A + EL+ +TC L TL EVG ALVPHYK FL++ N +N +KN K + G + D+ I TL+ LER GG FA IK +PT
Sbjct: 174 GVLVWVCPLQQLDYHYYLPLFLDGIRCTADPCKMLARQGLLDLLSAATGTPERVVPLLKDIAMALRNACLTDSQELVAYTCKVLETLVGIGPEVGLALVPHYKAFLSLLNKHINDAPLKNAQGK-EIGHNRKLDLSVLIEETLQMLERSGGSGVFAVIKHAVPT 336
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Match: A0A6S9H4I7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H4I7_HETAK) HSP 1 Score: 165 bits (418), Expect = 3.230e-47 Identity = 79/162 (48.77%), Postives = 108/162 (66.67%), Query Frame = 1
Query: 10 LVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGSPQRILPSLPGIMRAIRTAISCKNPELLVFTCTALCTLASGNKEVGAALVPHYKMFLNVFNMFVNVVKNTGDKIDYGQRNRQDIGEAITATLETLERYGGKYSFARIKQCIPTCE 495
L WVCPL+ LDY++YLP+FFDGIR E P K LARQGV +LLEAA+G P+R+LP LP ++ +R A+ ++P +L+ + L N VG ALVP+Y+ L+V N+F+ +N GD +DYGQR +D+ + LE LER GG +FA IK +PT E
Sbjct: 171 LTWVCPLQTLDYDHYLPIFFDGIRATEQPYKFLARQGVRELLEAARGYPERVLPCLPEVVAGLRRALDTRDPPVLLAALGCVEELVGCNAGVGEALVPYYRQLLSVMNLFLAKRENLGDAMDYGQRRGEDLAARVGEVLEALERTGGPDAFANIKYSVPTYE 332
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Match: F0Y431_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y431_AURAN) HSP 1 Score: 160 bits (405), Expect = 1.650e-46 Identity = 77/165 (46.67%), Postives = 104/165 (63.03%), Query Frame = 1
Query: 1 ANTLVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGSPQRILPSLPGIMRAIRTAISCKNPELLVFTCTALCTLASGNKEVGAALVPHYKMFLNVFNMFVNVVKNTGDKIDYGQRNRQDIGEAITATLETLERYGGKYSFARIKQCIPTCE 495
N L W+CPL QLDY +YLP+F DGIRC E P + +ARQG +L+E AKG P +LP LP +++ IR A++ K+P+++ AL + N VG ALVP Y+ L+V N+F +N GD I YGQR D+G A+ TLE LE+ GG +F IK +P E
Sbjct: 61 GNNLSWICPLLQLDYEHYLPIFLDGIRCTESPYQFVARQGFDELIEEAKGFPDCVLPCLPDLIKPIRLALNTKDPDIVHAALRALQKIVLSNYGVGEALVPFYRQLLSVMNLFFTKRQNLGDAIFYGQRKGTDLGTAVLETLELLEKTGGPNAFVNIKYMVPAYE 225
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Match: A0A7S2FEA0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEA0_9STRA) HSP 1 Score: 159 bits (403), Expect = 7.290e-46 Identity = 77/165 (46.67%), Postives = 105/165 (63.64%), Query Frame = 1
Query: 1 ANTLVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGSPQRILPSLPGIMRAIRTAISCKNPELLVFTCTALCTLASGNKEVGAALVPHYKMFLNVFNMFVNVVKNTGDKIDYGQRNRQDIGEAITATLETLERYGGKYSFARIKQCIPTCE 495
AN L WVCPL LDY +YLP+F DGIRC E+P LARQG +LLE A+G P R++P +P +++ +R A++ +P++++ T L L N VG ALVP+Y+ L+V N+F+ N GD IDY Q D+ AI TLE LE+ GG +F IK +PT E
Sbjct: 90 ANGLSWVCPLHNLDYEHYLPIFVDGIRCTENPYCFLARQGCHELLEGAQGYPDRVIPCIPELIKPLRLALTTNHPDIILAALTFLKELVLCNYGVGEALVPYYRQLLSVLNLFLTKRTNIGDAIDYSQFKGNDMSTAIMETLEVLEKNGGSNAFINIKYMVPTYE 254
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Match: A0A7S4ED43_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED43_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.130e-41 Identity = 73/164 (44.51%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 4 NTLVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGSPQRILPSLPGIMRAIRTAISCKNPELLVFTCTALCTLASGNKEVGAALVPHYKMFLNVFNMFVNVVKNTGDKIDYGQRNRQDIGEAITATLETLERYGGKYSFARIKQCIPTCE 495
NTL W CPL QLDY +YLP+F DGIRC + K +ARQG +++E AKG P +LP +P +++ IR A++ +P+++V AL + N VG A+VP Y+ L N+F +N GD+I YGQR D+G A+ TLE LE+ GG +F IK +P E
Sbjct: 202 NTLSWACPLLQLDYEHYLPIFLDGIRCTDARYKFVARQGFDEMIEEAKGFPDCVLPVVPALIKPIRLALATHDPDIVVAGLNALQKVVLSNYGVGEAMVPFYRQLLQPMNLFYTKRQNIGDQIFYGQRKGTDLGTAVLETLELLEKTGGPNAFVNIKSYVPVYE 365
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Match: A0A8C4FMN4_9TELE (Parkin coregulated n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4FMN4_9TELE) HSP 1 Score: 145 bits (366), Expect = 1.260e-40 Identity = 72/165 (43.64%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 1 ANTLVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGSPQRILPSLPGIMRAIRTAISCKNPELLVFTCTALCTLASGNKEVGAALVPHYKMFLNVFNMFVNVVKNTGDKIDYGQRNRQDIGEAITATLETLERYGGKYSFARIKQCIPTCE 495
N + W +E+LDY +YLP+FFDG+ E P + ARQG+ D+LE GS +ILP++P ++ I+ A++ +N +++ T L L + VG ALVP+Y+ L + N+F N+ +N+GDKIDY Q+ R++IG+ I TLE LERYGG+ +F IK +PT E
Sbjct: 63 GNRIAWKVDIEKLDYYHYLPLFFDGLCETEHPYEFFARQGIHDMLEHG-GS--KILPTVPQLIIPIKNALNTRNRQVICTTLKVLQHLVVSGEMVGEALVPYYRQILPILNIFKNINRNSGDKIDYSQQKRENIGDLIQETLEVLERYGGEDAFINIKYMVPTYE 224
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Match: A0A0M9GB55_9TRYP (Putative mitochondrial PACRGB n=2 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9GB55_9TRYP) HSP 1 Score: 147 bits (372), Expect = 1.550e-40 Identity = 74/164 (45.12%), Postives = 104/164 (63.41%), Query Frame = 1
Query: 4 NTLVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGSPQRILPSLPGIMRAIRTAISCKNPELLVFTCTALCTLASGNKEVGAALVPHYKMFLNVFNMFVNVVKNTGDKIDYGQRNRQDIGEAITATLETLERYGGKYSFARIKQCIPTCE 495
TL+W + +LDY++YLP+FFDG+R LE+P +A QG DLLE +ILP++P I+ ++TA++ ++P++L + L VG ALVP+Y+ L VFN+F N KN GD++DYGQRN QD+ I TL LERYGG ++ IK IPT E
Sbjct: 155 RTLMWKVDVSKLDYHHYLPIFFDGLRELEEPFSFVAHQGSLDLLE---NGGAKILPTVPQIIMPLKTALNTRHPDVLRKVFHVIQKLVVSGDHVGEALVPYYRQLLPVFNLFKNRTKNMGDRMDYGQRNSQDLSSLINDTLYLLERYGGPDAYINIKYMIPTYE 315
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Match: A0A8C3ZIR9_9TELE (Parkin coregulated n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZIR9_9TELE) HSP 1 Score: 145 bits (366), Expect = 1.570e-40 Identity = 72/165 (43.64%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 1 ANTLVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGSPQRILPSLPGIMRAIRTAISCKNPELLVFTCTALCTLASGNKEVGAALVPHYKMFLNVFNMFVNVVKNTGDKIDYGQRNRQDIGEAITATLETLERYGGKYSFARIKQCIPTCE 495
N + W +E+LDY +YLP+FFDG+ E P + ARQG+ D+LE GS +ILP++P ++ I+ A++ +N +++ T L L + VG ALVP+Y+ L + N+F N+ +N+GDKIDY Q+ R++IG+ I TLE LERYGG+ +F IK +PT E
Sbjct: 71 GNRIAWKVDIEKLDYYHYLPLFFDGLCETEHPYEFFARQGIHDMLEHG-GS--KILPTVPQLIIPIKNALNTRNRQVICTTLKVLQHLVVSGEMVGEALVPYYRQILPILNIFKNINRNSGDKIDYSQQKRENIGDLIQETLEVLERYGGEDAFINIKYMVPTYE 232 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17105.3972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig17105.3972.1 >prot_H-paniculata_contig17105.3972.1 ID=prot_H-paniculata_contig17105.3972.1|Name=mRNA_H-paniculata_contig17105.3972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp ANTLVWVCPLEQLDYNYYLPMFFDGIRCLEDPCKTLARQGVCDLLEAAKGback to top mRNA from alignment at H-paniculata_contig17105:2461..5443- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig17105.3972.1 ID=mRNA_H-paniculata_contig17105.3972.1|Name=mRNA_H-paniculata_contig17105.3972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2983bp|location=Sequence derived from alignment at H-paniculata_contig17105:2461..5443- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig17105:2461..5443- >mRNA_H-paniculata_contig17105.3972.1 ID=mRNA_H-paniculata_contig17105.3972.1|Name=mRNA_H-paniculata_contig17105.3972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at H-paniculata_contig17105:2461..5443- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |