prot_H-paniculata_contig1710.3969.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1710.3969.1
Unique Nameprot_H-paniculata_contig1710.3969.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length239
Homology
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Match: D7G6X6_ECTSI (RL10P_insert domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X6_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 3.520e-127
Identity = 187/232 (80.60%), Postives = 205/232 (88.36%), Query Frame = 0
Query:    1 MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRSKLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQVGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGSLGTWPVSMMDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAVFTISLLCRWSAGEFEQLMEPGNAEAGGGDAMI 232
            MPRS R QKVSLTKT KKGRELKQGIV++VRKCVDEYPS+YVFSF NLRSKLLKEVR+DFR+DSRFFMGKNKVM++ALGK+ +DEYQDNL+QVSK L+GQVGLLFT RP +EV  YF ALAVADHAPPGFVHDETI LPTGSLG WPVSMM+QFRKLGVVVEVE+GVLVNRKAI MCT GEPI+PEGAKLLALYD+KIA FT+SLLCRWS GEFE L E      G  DAM+
Sbjct:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFREDSRFFMGKNKVMILALGKSEQDEYQDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGEFEALAE------GTDDAMV 226          
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Match: A0A835Z2W2_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W2_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.860e-78
Identity = 124/220 (56.36%), Postives = 158/220 (71.82%), Query Frame = 0
Query:    1 MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRSKLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQVGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGSLGTWPVSMMDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAVFTISLLCRWSAGEFEQLMEP 220
            MP+S R + VSLT T KKGR LKQ ++ D+R  +D +  ++VF + N+RS+L+K+VR+DFR DSRFFMGKN +M  ALG +VEDEY DNL+QVS+ +RGQ GLL T+R ++ V+ YF+ LAV + A  GF   ETI LP G    WPV MMDQ RKLG+ VEV+D  L  RK   MC KG+ +TPE AKLL L+DRKI+VF I L CRWS G+FE+   P
Sbjct:    1 MPKSKRNKTVSLTSTAKKGRTLKQAVIKDIRDHIDSHQRLFVFRYDNMRSRLMKDVRLDFRGDSRFFMGKNTIMQRALGTSVEDEYSDNLRQVSRHIRGQCGLLVTNRSQEAVLSYFADLAVPEFANAGFFAQETITLPVGPT-QWPVGMMDQLRKLGLQVEVQDSQLWLRKECDMCKKGQALTPEQAKLLTLHDRKISVFKIKLTCRWSEGDFEEYAAP 219          
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Match: M4C3P0_HYAAE (Ribosome assembly factor mrt4 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C3P0_HYAAE)

HSP 1 Score: 206 bits (524), Expect = 2.760e-63
Identity = 111/235 (47.23%), Postives = 160/235 (68.09%), Query Frame = 0
Query:    1 MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRSKLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQVGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGSLGTWPVSMMDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAVFTISLLCRWSAGEFEQLMEPGNAEAGGGDAMIDDD 235
            MP+S R++  +LT+  KKG ELK+ +V  +R  VD Y S YVFSF N+R+   K+VRMDF KDSRFF+GKNKVM +ALG++ EDEY +NL ++SK + G  GLLFT++PRDEVV YF+ L+V+D+   GFV  +TI +P G L  +  SM++  R LG+ V++++GV++  +   +C  G+ +TPE AKLL  +D K+A F + +L  WS   +E+L    +A   G D M D+D
Sbjct:    1 MPKSKRQRTKTLTQANKKGNELKKNVVEAIRNAVDTYESAYVFSFQNMRTSHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEDEYAENLFRLSKDVSGNTGLLFTNKPRDEVVDYFAKLSVSDYPRAGFVATDTITIPEGPLPQFIGSMLESLRGLGLPVDLKNGVVMLSRNYTICKSGQTLTPEQAKLLVHFDHKLAEFKLVMLSVWSKDTYERLSAD-DAVTSGEDDMEDED 233          
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Match: A0A6V1SP53_HETAK (Ribosome assembly factor mrt4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SP53_HETAK)

HSP 1 Score: 205 bits (521), Expect = 4.450e-63
Identity = 114/213 (53.52%), Postives = 142/213 (66.67%), Query Frame = 0
Query:    1 MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRSKLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQVGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGSLGTWPVSMMDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAVFTISLLCRWSAGE 213
            MP+S R++KVSLTKT  KGR+ KQ +V  VR+ +DE+ ++Y F F N+RS   KE R D+R DSRFF+GKNK+M IALG+T EDEYQD L+ +SK L G VGLL TSRPRDEV  YFS  +  D A  G +  ET+ L  GSL  +P  MM + RKLG+ VEV D VL   +   +C  GEPI  E AKLL     K+A F ISL+ RWS  +
Sbjct:    1 MPKSKRDKKVSLTKTDSKGRQQKQKMVQKVREAIDEFDALYTFRFDNMRSNNFKECRADWR-DSRFFLGKNKLMQIALGRTPEDEYQDGLRSISKELVGNVGLLMTSRPRDEVESYFSNFSKKDFAKAGAIAPETVTLERGSLN-FPAYMMSEIRKLGLTVEVRDAVLELMEDATICVAGEPIGVEAAKLLEHMQLKLATFQISLVSRWSEAD 211          
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Match: A0A8K1CRH8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRH8_PYTOL)

HSP 1 Score: 204 bits (520), Expect = 1.040e-62
Identity = 113/237 (47.68%), Postives = 159/237 (67.09%), Query Frame = 0
Query:    1 MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRSKLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQVGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGSLGTWPVSMMDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAVFTISLLCRWSAGEFEQLMEPGNAEAGGGDAMIDDDEE 237
            MPRS R++   LTK+ KKG ELKQ +V  +R+ VD Y S Y FSF N+R+   KEVR+DFR DSRFF+GKNKVM +ALG+T E+EY D+L +++  + G VGL FT+R R EV+ YF+ L+  D A  GFV  E + +P G L  +  S ++  R LG+ V+++ GV+V R+   +C +G+ +TPE A+LL  +DRK+A F ++ L  WS G FE+L E  N EAG     +D+DE+
Sbjct:    1 MPRSRRQRVKPLTKSEKKGSELKQRVVDSIREAVDTYESAYAFSFQNMRTNHFKEVRLDFR-DSRFFLGKNKVMKLALGRTKEEEYADDLFKLAADVNGSVGLFFTNRDRQEVIDYFNKLSFTDFARSGFVATEAVSVPEGPLPQFIGSQLESLRTLGLPVDLKKGVVVLRQDYTICKEGQTLTPEQARLLQHFDRKMATFKLTPLSVWSKGSFERLAE--NPEAG---MEVDEDED 231          
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Match: I2CRG5_NANGC (Ribosome assembly factor mrt4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRG5_NANGC)

HSP 1 Score: 204 bits (519), Expect = 1.900e-62
Identity = 113/219 (51.60%), Postives = 146/219 (66.67%), Query Frame = 0
Query:    1 MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRSKLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQVGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGS--LGTWPVSMMDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAVFTISLLCRWSAGEFEQL 217
            MPRS R+QKVSLTKT  KG+E K G +  VR+ +D + S+YVFSF ++RS   K+VR+D+R DSRFFMGKNKVM  ALG   EDE++DNL+ +SK L GQVGLL T+R R+EV+ YF    V D A PG + D  + L      L  +P SM   FRKLG+ +E ++G LV  +A  +C KG+ ITPE AKL+   D  +  F I L+C W  GEFE+L
Sbjct:   22 MPRSRRDQKVSLTKTTSKGKEQKAGTIAKVREALDSFTSLYVFSFQHMRSSKFKDVRIDWR-DSRFFMGKNKVMQKALGLLPEDEFRDNLRFLSKRLSGQVGLLATNRSREEVLTYFENFKVQDFAKPGVIADADVTLEPSKDPLHFFPTSMFQLFRKLGLNLETKNGKLVLLEAFPVCRKGKAITPEQAKLMTHLDLPLVDFRIRLVCCWRDGEFEEL 239          
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Match: H3GA64_PHYRM (Ribosome assembly factor mrt4 n=24 Tax=Phytophthora TaxID=4783 RepID=H3GA64_PHYRM)

HSP 1 Score: 204 bits (518), Expect = 2.230e-62
Identity = 107/227 (47.14%), Postives = 155/227 (68.28%), Query Frame = 0
Query:    1 MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRSKLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQVGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGSLGTWPVSMMDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAVFTISLLCRWSAGEFEQLM-EPGNAEAG 226
            MP+S R++   LT+  KKG ELKQ +V  +R  VD Y S YVFSF N+R+   K+VRMDF KDSRFF+GKNKVM +ALG++ E+EY +NL ++SK + G  GLLFT++P +EVV YF+ L+V+DH   GFV  ET+ +P G L  +  SM++  R LG+ V++++GV+V  +   +C  G+ +TPE AKLL  +D K+A F + +L  WS  +++++  E  NA  G
Sbjct:    1 MPKSKRQRTKPLTQANKKGNELKQNVVEAIRNAVDTYASAYVFSFQNMRTNHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLFRLSKDVSGSTGLLFTNKPHEEVVAYFAKLSVSDHPRSGFVATETVTIPEGPLPQFIGSMLESLRGLGLPVDLKNGVIVLSRNYTICKPGQTLTPEQAKLLVHFDHKMAEFKLVMLSLWSKDKYQRIAAEDANATTG 226          
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Match: A0A3F2RLT2_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLT2_9STRA)

HSP 1 Score: 200 bits (509), Expect = 5.790e-61
Identity = 109/235 (46.38%), Postives = 159/235 (67.66%), Query Frame = 0
Query:    1 MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRSKLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQVGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGSLGTWPVSMMDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAVFTISLLCRWSAGEFEQLMEPGNAEAGGGDAMIDDD 235
            MP+S R++  +LT+  KKG  LKQ +V  VR  VD Y S YVFSF N+R+   K+VRMDF KDSRFF+GKNKVM +ALG++ E+EY +NL ++SK + G  GLLFT++P +EV+ YFS L+V+D+   GFV  ET+ +P G L  +  SM++  R LG+ V+++ GV+V  +   +C  G+ +TPE AKLL  +DRK+A F + +L  WS  ++++L    +A   G D+  D+D
Sbjct:    1 MPKSKRQRTKALTQADKKGNALKQNVVDAVRNAVDTYTSAYVFSFQNMRTNHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLFRLSKDVSGNTGLLFTNKPHEEVLDYFSKLSVSDYPRSGFVVTETVTVPEGPLPQFIGSMIESLRGLGLPVDLKKGVVVLSQNYTICKTGQAVTPEQAKLLVHFDRKMAEFKLVVLSVWSKDKYQRLASE-DATTTGDDSTEDED 233          
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Match: A0A6G0X521_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X521_9STRA)

HSP 1 Score: 200 bits (509), Expect = 6.760e-61
Identity = 102/219 (46.58%), Postives = 152/219 (69.41%), Query Frame = 0
Query:    1 MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRSKLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQVGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGSLGTWPVSMMDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAVFTISLLCRWSA-GEFEQLM 218
            MP+S R ++  LT+T KKG ELK+G+V  +R  +DEY ++YVFSF N+R+   K VR DF  +SRFF+GKNKVM +ALG+T E+EY DNL +++  + G VGLL T++  DEV  YF  L++ D+A  GFV  ET+ +P G    +  SM++  R+LG+ V+++ GV+V      +C +G+ +TPE AKLL  +D+K++ F + LL RWS+ G+FE+L+
Sbjct:    1 MPKSKRVRQKPLTQTNKKGAELKKGVVESIRNAIDEYKTVYVFSFENMRTNHFKVVRADF-SESRFFLGKNKVMKVALGRTPEEEYADNLYKLASDISGSVGLLMTNKSHDEVADYFKKLSIEDYAKSGFVSTETVTIPAGPQPQFVGSMVESLRQLGLPVDLKSGVIVLNNDHTICKEGQTLTPEQAKLLVHFDKKMSNFHVELLSRWSSDGKFERLV 218          
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Match: K3WRY3_GLOUD (Ribosome assembly factor mrt4 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRY3_GLOUD)

HSP 1 Score: 200 bits (508), Expect = 6.800e-61
Identity = 108/237 (45.57%), Postives = 157/237 (66.24%), Query Frame = 0
Query:    1 MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRSKLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQVGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGSLGTWPVSMMDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAVFTISLLCRWSAGEFEQLMEPGNAEAGGGDAMIDDDEE 237
            MP+S R++  +LTK  KK  +LKQ +V  VR+ VD Y +++ FSF N+R+   KEVRMDFR DSRFF+GKNKVM +ALG+T  +EY DNL ++S+ L G VGLLFT +  DEV +YF+ L+  D A  GFV  ET+ +P G L  +  SM++  R LG+ V+++ G +V  +   +C +G+ +TPE  KLL  +DRK+A F + +L  WS GE+++L +         +A+ DDD+E
Sbjct:    1 MPKSKRQRTKALTKVDKKTSDLKQKVVESVREAVDSYATLFAFSFVNMRTNHFKEVRMDFR-DSRFFLGKNKVMKVALGRTEAEEYADNLSKISRDLNGNVGLLFTDKTEDEVTEYFNKLSEKDFARSGFVATETVQVPQGPLPQFIGSMVESLRTLGLPVDLKKGNVVLNQDYTICKEGQTLTPEQCKLLVHFDRKMAEFKLVMLSSWSKGEYKRLADASV------NAIEDDDDE 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1710.3969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6X6_ECTSI3.520e-12780.60RL10P_insert domain-containing protein n=2 Tax=Ect... [more]
A0A835Z2W2_9STRA1.860e-7856.36Ribosome assembly factor mrt4 n=1 Tax=Tribonema mi... [more]
M4C3P0_HYAAE2.760e-6347.23Ribosome assembly factor mrt4 n=1 Tax=Hyaloperonos... [more]
A0A6V1SP53_HETAK4.450e-6353.52Ribosome assembly factor mrt4 n=1 Tax=Heterosigma ... [more]
A0A8K1CRH8_PYTOL1.040e-6247.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
I2CRG5_NANGC1.900e-6251.60Ribosome assembly factor mrt4 (Fragment) n=1 Tax=N... [more]
H3GA64_PHYRM2.230e-6247.14Ribosome assembly factor mrt4 n=24 Tax=Phytophthor... [more]
A0A3F2RLT2_9STRA5.790e-6146.38Ribosome assembly factor mrt4 n=1 Tax=Phytophthora... [more]
A0A6G0X521_9STRA6.760e-6146.58Ribosome assembly factor mrt4 n=1 Tax=Aphanomyces ... [more]
K3WRY3_GLOUD6.800e-6145.57Ribosome assembly factor mrt4 n=1 Tax=Globisporang... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.105.20coord: 125..203
e-value: 6.8E-58
score: 197.3
NoneNo IPR availableGENE3D3.30.70.1730coord: 30..211
e-value: 6.8E-58
score: 197.3
NoneNo IPR availablePANTHERPTHR45841FAMILY NOT NAMEDcoord: 1..219
NoneNo IPR availableSUPERFAMILY160369Ribosomal protein L10-likecoord: 20..155
IPR04063760S ribosomal protein L10P, insertion domainPFAMPF17777RL10P_insertcoord: 128..193
e-value: 5.8E-13
score: 48.6
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 19..120
e-value: 1.9E-22
score: 79.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1710contigH-paniculata_contig1710:3556..7753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1710.3969.1mRNA_H-paniculata_contig1710.3969.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1710 3284..8269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1710.3969.1 ID=prot_H-paniculata_contig1710.3969.1|Name=mRNA_H-paniculata_contig1710.3969.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp
MPRSAREQKVSLTKTVKKGRELKQGIVTDVRKCVDEYPSIYVFSFANLRS
KLLKEVRMDFRKDSRFFMGKNKVMMIALGKTVEDEYQDNLKQVSKCLRGQ
VGLLFTSRPRDEVVKYFSALAVADHAPPGFVHDETIVLPTGSLGTWPVSM
MDQFRKLGVVVEVEDGVLVNRKAIKMCTKGEPITPEGAKLLALYDRKIAV
FTISLLCRWSAGEFEQLMEPGNAEAGGGDAMIDDDEEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040637RL10P_insert
IPR001790Ribosomal_L10P