mRNA_H-paniculata_contig171.3966.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Match: D7FSV8_ECTSI (Sister chromatid cohesion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV8_ECTSI) HSP 1 Score: 1125 bits (2909), Expect = 0.000e+0 Identity = 643/1047 (61.41%), Postives = 748/1047 (71.44%), Query Frame = 1
Query: 55 AHLLGQWEPAG---LSKDSLTLAHDGTLRLSRRLLVERELCSRGLDAILGHLLALLRDPATSFRARAVKRLGGIVDADASIMAREAVRMSVTSSFLDEAVSVRQVASYRPPLRLTPVSKLDGFYLPLTTLMYA--GVSRAIPRPSRLPRLSHGFTGTPSR-VSRTGGVSRAGLEVSAEDGVVVRPVAVQLMEVVYGVKDNSWLVKLLRGMIFGPGSGDKQRKDCSKKREASVRRCKMLVKALVEVQLGLDDGISAVSEG---PLKELPKQLLACVDTLSVMCKASPALLAAHVETLLPYLKGENGLSNAEESAVCQQVSDMVYETLPLLQHTDMTRMTELSQDLVRLAYRFGSAVVHSSLRCLARQAESLVQLVTHDASPLLDLLQSFYSRLHCHRNDVR--QGARLEVFEILRLYLTTAKDPEIRSKALQGLGQLLIGAPRLMLLADKCGVVGAALEQSAGDAVLAQALRCWKDILAAEEERVETGLAIDDMEATGVTVAQRVQGDQDAESSVVGGVLQMHLNAVLSHLFHRNKAVRAAAITLLGVMLRQGLVNPVDVVPQLLALGGDSAQFVRGEAFRLLTVEDSKNSEFVRTRLLDGLFMAYTFQQLILSDWRPLLPSHDPASGGRGG-CSLVGPAYTMCVRPQRPTRYSCLKQLMSLFAETKAREVRSFVQFAQQRVGV----------------VHLAGQDPATRLDGSGTPGVGVTVPPSYRNGGSGVSRAGSLGSMKDGLRTLGPLDVRALSFVCCTLAGLPYEVQEEPLFIVDYVNRQMSLQGSQCLELLHTLLTRNGIQTPPXXXXXXXXXXXXXGGVA-RSNAVPSASTHADDCADQENQEALQRLHPAKGGTQPDRKYGTFLCASRGLWFRCVLQDGIGRLRRTCSAAAAFSMLLRLKRYLKIAYGLTLAKCQSYRPNDSTKATEKQAQVPNPPPEAFSPFSS-RKGGAREAFNPAALGAAAERAAETLATGSAQELAKFYLELRGLANDDPEDYSAWDNVAAAAL-------GEAADTGSTGYGSETVKRGRKRG 3084
AHLLGQW+ G S D+LTLAHDGTLRL RRL+VERELC RGLDAIL HLLA LRDPATS RARAVKRL G+VDAD ++M R+ VR+SVTSSFLDEAVSVRQ + P P + G T ++ + + R P P R+PRL G + + +R V R AVQ+MEVV+GVKDN WLVKLLRGMI GPG+GDKQ+KD SKKREAS+RRCK LV+ALV VQLGLD+G+SAV G PL+ELP+QLLACV TL V+C+ASP+LLA HV++LLPYLKGENGL+ AEES +C+QVSDMVYE LPL+++ D+T+MTEL+ DLV+LAYRFGSAVVH+SLRCLAR LV+LVTHDA PLL LLQSFYS LH HR DV+ QGARLEVFE+LR+Y T AK P +RSKALQGLGQLLIGAPRLMLLAD+ GVVGAAL + GD VL QALRC+KDIL AEE+RVETGLA DMEATGVTVAQRVQGDQD ESSVVGGVLQMHL AVLS LFHRN+ VRAAAI+LLGVMLRQGLVNPVDVVPQLLALGGDSA FVR EAFRLLTVEDSKN EF+RTRLLDGLFMAYTFQQ +L DWRPLLPS DPA+GG GG CS+VGPAYT+CVRPQRP+RYSCL+ LMSLF+E KA E+ SFV A++++GV G+DP G PPS + + +SR+ SLGS G GPLD+RALSFVCCTLAGLPY+VQEEPLF++DYVNRQMSLQGSQCLELLHTLL R G+ TPP R S AD + + + P++ T P LR+TCSAAAAFSMLLRLK YLK AYGLT A+CQSY+PN++TKA EKQAQ PNPPPE F+PF++ +KG + + +++ AAA AAE L +GS EL+ FY+ELR LA DDPEDY+ W+ + A G D GS + KRG+KRG
Sbjct: 1136 AHLLGQWKSDGGCSSSWDALTLAHDGTLRLCRRLVVERELCKRGLDAILAHLLAFLRDPATSLRARAVKRLAGVVDADGTLMGRDVVRVSVTSSFLDEAVSVRQDQALTSPGAKRP--RRSGSARKTTAMLSSLPQLPRKPPLPLRVPRLLRGSSPSKARNVGRGSXXXXXXXXXXXXXXXXXXXXAVQVMEVVHGVKDNDWLVKLLRGMICGPGAGDKQKKDRSKKREASLRRCKALVQALVNVQLGLDEGVSAVPPGTGSPLEELPQQLLACVATLGVLCRASPSLLAPHVQSLLPYLKGENGLTAAEESEICRQVSDMVYEALPLMKNPDLTQMTELADDLVQLAYRFGSAVVHASLRCLAR----LVRLVTHDAKPLLSLLQSFYSSLHRHRTDVQHHQGARLEVFEMLRVYFTKAKGPHLRSKALQGLGQLLIGAPRLMLLADQHGVVGAALAKGTGDEVLVQALRCFKDILEAEEDRVETGLARVDMEATGVTVAQRVQGDQDGESSVVGGVLQMHLAAVLSRLFHRNRVVRAAAISLLGVMLRQGLVNPVDVVPQLLALGGDSAGFVRAEAFRLLTVEDSKNGEFIRTRLLDGLFMAYTFQQHVLCDWRPLLPSTDPAAGGTGGGCSIVGPAYTLCVRPQRPSRYSCLRLLMSLFSEAKAWELASFVSSAKEKLGVSSAGVXXXXXXXXXXXXXXGGEDP-----------FGGATPPSAKRARNSLSRSSSLGS--GGRGKTGPLDMRALSFVCCTLAGLPYQVQEEPLFVIDYVNRQMSLQGSQCLELLHTLLARKGVPTPPPDSDDIDEDDLGLHAARERQEGGHRVSVVADLTTPENSSQNGNPRAPSRSATAPPAXXXXXXXXXXXXXXXXXXXXXXXHLRKTCSAAAAFSMLLRLKVYLKSAYGLTAARCQSYKPNEATKANEKQAQSPNPPPETFNPFTTAKKGAGKSVVDTSSIAAAATSAAEVLNSGSPVELSAFYMELRRLAQDDPEDYAGWEGLEEAVSDGQDGGGGGETDAGSGSDSNVPKKRGKKRG 2163
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Match: A0A6H5JQE5_9PHAE (Sister chromatid cohesion protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQE5_9PHAE) HSP 1 Score: 859 bits (2220), Expect = 1.190e-297 Identity = 490/812 (60.34%), Postives = 579/812 (71.31%), Query Frame = 1
Query: 577 VVVRPVAVQLMEVVYGVKDNSWLVKLLRGMIFGPGSGDKQRKDCSKKREASVRRCKMLVKALVEVQLGLDDGISAVSEGPLKELPKQLLACVDTLSVMCKASPALLAAHVETLLPYLKGENGLSNAEESAVCQQVSDMVYETLPLLQHTDMTRMTELSQDLVRLAYRFGSAVVHSSLRCLARQAESLVQLVTHDASPLLDLLQSFYSRLHCHRNDVRQGARLEVFEILRLYLTTAKDPEIRSKALQGLGQLLIGAPRLMLLADKCGVVGAALEQSAGDAVLAQALRCWKDILAAEEERVETGLAIDDMEATGVTVAQRVQGDQDAESSVVGGVLQMHLNAVLSHLFHRNKAVRAAAITLLGVMLRQGLVNPVDVVPQLLALGGDSAQFVRGEAFRLLTVEDSKNSEFVRTRLLDGLFMAYTFQQLILSDWRPLLPSHDPASGGRGG-CSLVGPAYTMCVRPQRPTRYSCLKQLMSLFAETKAREVRSFVQFAQQRVGV-VHLAGQDPATRLDGSGTPGVGVTVPPSYRNGGSGVSRAGSLGSMKDGLRTLGPLDVRALSFVCCTLAGLPYEVQEEPLFIVDYVNRQMSLQGSQCLELLHTLLTRNGIQTPPXXXXXXXXXXXXXGGVA-RSNAVPSASTHADDCADQENQEALQRLHPAKGGTQPDRKYGTFLCASRGLWFRCVLQDGIGRLRRTCSAAAAFSMLLRLKRYLKIAYGLTLAKCQSYRPNDSTKATEKQAQVPNPPPEAFSPFSS-RKGGAREAFNPAALGAAAERAAETLATGSAQELAKFYLELRGLANDDPEDYSAWDNV 3000
+ V VAVQLMEVV+GVKDN WLVKLLRGMI GPG+GDKQ+KD SKKREAS+RRCK L +ALV VQLGLD+G+SAV V+C+ASP+LLA HV++LLPYLKGENGL+ A+ES +C+QVSDMVYE LPL+++ D+T+MTEL+ DLV+LAYRFGSAVVH+SLRCLAR D DL QGARLEVFE+LR+Y T AK P +RSKALQGLGQLLIGAPRLMLLAD+ GVVGAAL + AGD VL QALRC+KDIL AEE+RVETGLA DMEATGVTVAQRVQGDQD ESSVVGGVLQMHL AVLS LFHRN+ V NPVDVVPQLLALGGDSA FVR EAFRLLTVEDSKN EF+RTRLLDGLFMAYTFQQ +L DWRPLLPS DPA+GG GG CS+VGPAYT+CVRPQRP+RYSCL+ L+SLF+E KA E+ SFV +++++GV + G R+ G P VG T P + R S +SR+ SLG + +GPLD+RALSFVCCTLAGLPY+VQEEPLF++DYVNRQMSLQGSQCLELLHTLL R G+ TPP R S AD + N E ++ T P G ++ G+ ++ + LR+TCSAAAAFSMLLRLK YLK AYGLT A+CQSY+PN++TKA EKQAQ PNPPPE F+PF++ +KG + + +++ AAA AAE L +GS EL+ FY+ELR LA DDPEDY+ W+ +
Sbjct: 1 MAVTAVAVQLMEVVHGVKDNDWLVKLLRGMICGPGAGDKQKKDRSKKREASLRRCKALAQALVNVQLGLDEGVSAVPPD------------TGRWGVLCRASPSLLAPHVQSLLPYLKGENGLTAAQESEICRQVSDMVYEALPLMKNPDLTQMTELADDLVQLAYRFGSAVVHASLRCLARFYAFGGDEGGGDGHQ--DLEGGGPWGFGLADQVTEQGARLEVFEMLRVYFTKAKGPHLRSKALQGLGQLLIGAPRLMLLADQHGVVGAALAEGAGDEVLVQALRCFKDILEAEEDRVETGLARVDMEATGVTVAQRVQGDQDGESSVVGGVLQMHLAAVLSRLFHRNRVV-----------------NPVDVVPQLLALGGDSAGFVRAEAFRLLTVEDSKNGEFIRTRLLDGLFMAYTFQQHVLCDWRPLLPSTDPAAGGMGGGCSIVGPAYTLCVRPQRPSRYSCLRLLLSLFSEAKAWELSSFVSSSKEKLGVSCVVVGSGDRGRVGGE-DPFVGATHPSAKRARNS-LSRSSSLGPSERA--KMGPLDMRALSFVCCTLAGLPYQVQEEPLFVIDYVNRQMSLQGSQCLELLHTLLARKGVPTPPPDSDDIEEDDLGLHAARERQEGGHRVSGVADLTTPEHNSENGNPRALSRSATAPPAVGGDGASSAAGMGAANAEEENMMHLRKTCSAAAAFSMLLRLKVYLKSAYGLTAARCQSYKPNEATKANEKQAQSPNPPPETFNPFTTAKKGAGKNVVDTSSIAAAAASAAEVLDSGSPVELSAFYMELRRLAQDDPEDYAGWEGL 777
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Match: A0A835Z2V2_9STRA (Sister chromatid cohesion protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2V2_9STRA) HSP 1 Score: 429 bits (1102), Expect = 8.040e-125 Identity = 346/1035 (33.43%), Postives = 477/1035 (46.09%), Query Frame = 1
Query: 52 AAHLLGQWEP-------AGLSKDSLTLAHDGTLRLSRRLLVERELCS-RGLDAILGHLLALLRDPATSFRARAVKRLGGIVDADASIMAREAVRMSVTSSFLDEAVSVRQVA-----SYRPPLRLTPVSKLDGFYLPLTTLMYAGVSRAIPRPSRLPRLSHGFTGTPSRVSRTGGVSRAGLE----VSAEDGV--VVRPV----------------------------AVQLMEVVYGVKDNSWLVKLLRGMIFGPGSGDKQRKDCSKKREASVRRCKMLVKALVEVQLGLDDGISAVSEGPLKELPKQLLACVDTLSVMCKASPALLAAHVETLLPYLKGENGLSNAEESAVCQQVSDMVYETLPLLQHTDMTRMTELSQDLVRLAYRFGSAVVHSSLRCLARQAESLVQLVTHDASPLLDLLQSFYSRLH------------------------CHRNDVRQGARLE---------------------------------------VFEILRLYLT----------TAKDPEIRSKALQGLGQLLIGAPRLMLLADKCGVVGAALEQSAGDAV--LAQALRCWKDILAAEEERVETGLAIDDMEATGVTVAQRVQGDQDAESSVVGGVLQMHLNAVLSHLFHRNKAVRAAAITLLGVMLRQGLVNPVDVVPQLLALGGDSAQFVRGEAFRLLTVEDSKNSEFVRTRLLDGLFMAYTFQQLILSDWRPLLPSHDPASGGRGGCSLVGPAYTMCVRPQRPTRYSCLKQLMSLFAETKAREVRSFVQFAQQRVGVVHLAGQDPATRLDGSGTPGVGV-----TVPPSYRNGGSGVSRAGSLGSMKDGLRTLGPLDVRALSFVCCTLAGLPYEVQEEPLFIVDYVNRQMSLQGSQCLELLHTLLTRNGIQTPPXXXXXXXXXXXXXGGVARSNAVPSASTHADDCADQENQEALQRLHPAKGGTQPDRKYGTFLCASRGLWFRCVLQDGIGRLRRTCSAAAAFSMLLRLKRYLKIAYGLTLAKCQSYRPNDSTKATE 2775
A H L QWEP L L + RL+R LLV RELCS +GL +L H +A+L A+ R R VK L G+V AD ++M E VR ++ F DE++SVR+ A Y V L+ ++ LM V + + R G T R + A +E V ED + ++R A+Q+MEV VK WLV L+RG+IFGP GDK R D K RE ++ C LV ALVE L LD+G + L +QLLA + L V A P LL HV+TL PYLKGENGL+ +ES +C VSD++ + +PLL D+ + ++ DL RLAYRFGSAVV SS+ CLA +V VTHD SP++DLL+ YS L C + ++ A L+ V+ ILRL+ + TA E+++KALQ L LL+G+PRLMLLA K G+VG AL+QS G LAQAL W+ +L AEEERVE+G A + MEA G++VAQRV+GDQD+ESSVVGGVLQ+H+ AV L+H N +GLV+P++ VP L+AL D A VR EA R + VED K + V+ R++DG+F+AY + LLP+ DP S G S+ Y+ C++ R L+ + SLF E +V+ +Q A+ R+ H PA + + G V ++ R GG G+ PL +R L F+ LA LPY+ +EEPL ++ ++N+ +SL GS+ AL+R A G P G L+ CS+AAA MLL+LK +LK + L+ A+CQ++ P+++T E
Sbjct: 683 AEHFLQQWEPPAATVVNGSLGWTEAVLNAEPQARLARHLLVHRELCSAKGLQFLLQHTMAMLSASASGVRCRVVKGLSGVVGADPALMGLEMVRHAMEERFHDESISVREAAVNMVGQYVLQGGPDGVDLLETYH---RALMERLVDVGVSVRKSVVRTLRGCLSTYPCHKRRSEICSALVERSSIVKEEDTIRDIIRDTFQDLWFSEPAPKDEALSQGEQQQHVEACALQMMEVAAEVKSRDWLVVLIRGLIFGPAEGDKGRADSFKHREVAMGMCHKLVAALVEFLLRLDEGTPLNCK--LDTSAQQLLATITLLHVFSSAYPQLLVPHVDTLYPYLKGENGLTFVDESQLCLGVSDVIKQVVPLLPRPDLQSLQQVVADLKRLAYRFGSAVVQSSIECLA----CIVGQVTHDPSPIMDLLEKCYSYLFKYHRAAKGVDPKFLQRALIITGHVCRFHSLKPSASLDLELQQEEEGGSSQAADGLLQSQATDQLPPQLPQDGALRVVYNILRLFASKGALFYRDAPTAIAAEVQAKALQALSSLLVGSPRLMLLAQKHGLVGGALDQSKGHTARALAQALCSWRHVLVAEEERVESGAARETMEAAGISVAQRVRGDQDSESSVVGGVLQLHVPAVRRLLYHENV---------------EGLVDPLETVPHLVALQSDPAAPVRSEAMRQIMVEDEKRRDVVQMRVMDGMFLAYAWTAAAPV---VLLPADDPISDAHGPSSVFSAIYSTCIQQAFGARNVFLRHVTSLFEERSRDKVKVLMQTARDRL---HQHASTPALQTATAAGAGPSVRQRRQSLLTKQREGGPGIDE---------------PLQLRLLWFLAMMLAHLPYDKEEEPLLVIYHINKIVSLYGSEIAL------------------------------------------------------ALRRQMGALGLPLPSNDSDXXXXXXXXXXXXXXXXTGAAALK--CSSAAAMCMLLQLKHHLKQTHHLSDARCQAFAPSETTAKGE 1616
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Match: W7TH99_9STRA (Sister chromatid cohesion protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH99_9STRA) HSP 1 Score: 357 bits (916), Expect = 9.060e-100 Identity = 320/1022 (31.31%), Postives = 460/1022 (45.01%), Query Frame = 1
Query: 109 LAHDGTLRLSRRLLVERELCSRGLDAILGHLLALLRDPATSFRARAVKRLGGIVDADASIMAREAVRMSVTSSFLDEAVSVRQ-----VASYRPPLRLTPVSKLDGFYLPLTT----------------------------LMYAGVSRAIPRPSRLPR-------LSHGF------TGTPSRVSRTGGVSRAGLEVSAEDGVV-----------------VRPVAVQLMEVVYGVKDNSWLVKLLRGMIFGPGSGDKQRKDCSKKREASVRRCKMLVKALVEVQLGLDDGISAVSEGPLKELP---KQLLACVDTLSVMCKASPALLAAHVETLLPYLKGENGLSNAEESAVCQQVSDMVYETLPLLQHTDMTRMTELSQDLVRLAYRFGSAVVHSSLRCLARQAESLVQLVTHDASPLLDLLQSFY--------------------SRLHCHRNDVRQG-------------------------------------ARLEVFEILRLYLTTAKDPEIRSKALQGLGQLLIGAPRLMLLADKCGVVGAALEQSAGDA---VLAQALRCWKDILAAEEERVETGLAIDDMEATGVTVAQRVQGDQDAESSVVGGVLQMHLNAVLSHLFHRNKAVRAAAITLLGVMLRQGLVNPVDVVPQLLALGGDSAQFVRGEAFRLLTVEDSKNSEFVRTRLLDGLFMAYTFQQLILSDWR-----PLLPSHDPASGGRGGC----SLVGPAYTMCVRPQRPTRYSCLKQLMSLFAETKAREV-----RSFVQFAQQRVGVVHLAGQDPATRLDGSGTPGVGVTVPPSYRNGGSGVSRAGSLGSMKDGLRTLGPLDVRALSFVCCTLAGLPYEVQEEPLFIVDYVNRQMSLQGSQCLELLHTLLTRNGIQTPPXXXXXXXXXXXXXGGVARSNAVPSASTHADDCADQENQEALQRLHPAKGGTQPDRKYGTFLCAS--RGLWFRCVLQDGIGRLRRTCSAAAAFSMLLRLKRYLKIAYGLTLAKCQSYR 2748
L + + L+ L V R L + L +L LLALL ++RAR +K G I+++D +M V+ +V F DEA SVRQ V Y L S D +Y PL L R + R S + + F G S S G +E DG V + V +Q++EV+ GV + WLV LL G++FGP G + +K+ ++R+ ++C +V+ LV + L LD+G L EL KQLLA + TL V +A P L HV+TLLPYLKGEN L AEE+A+C +V+ MV LP L H D ++ +DLV + Y+FG+A +H++++CLA + + D +L L +FY +R HR V G A + + +L LYLT KD +KA+Q L L G LML A + VVG L G A V QAL+ +++L AEE RVE+G A M GV+V QRV+GDQDAE+S+VGGV+Q HL+++ LF R+ +R AA+ +L V+ RQGLVNP+ +P L+AL D +R A+R L +E K+ EF+ R+L+G+ ++YTFQ+ ILS L+ + + GG GG S +GP Y+ C+R R RYS L+ L++LF E AR+V R +Q Q+ + T S +GV + D G LD L++V LA LP++VQEEPLF+V ++R +SLQG L + LLT G G A NA +T C D++ + + K G + R +L S G R + + +L+ A + +LL LK +LK Y L+ +CQ R
Sbjct: 668 LPTEAVVHLNHALAVSRPLL-QSLGLLLFRLLALLGQGQAAWRARVMKAFGNILESDPLLMLDAQVKQAVVDRFQDEATSVRQATVELVGKYV----LQQPSLFDSYYQPLXXXXXXXXXXXXXXXXXXXXXXLQRCPTHPLRTEICRRLVGRASMVKEEDTVKDLVQDSFQAMWFSVGVSSEASAGEGGKEDEVEGDGSDGHVADEEIGWKLKKLSEEERLTAVGLQMVEVIAGVANTDWLVALLTGLLFGPNEGGQGKKERGRQRKVVAQQCGRVVEVLVNLLLELDEGNQPPLGSKLPELATPAKQLLAVIATLHVFSRADPRFLLPHVDTLLPYLKGENHLEAAEEAALCCKVAQMVGLVLPHLSHPDRAVYAQVGRDLVLITYQFGAATIHAAVQCLANLC---ICVQGGDPGLILGLANTFYRVLLKFREKPSFAPQEADYTTRSSTHRALVVLGCVCRYYPGFFPPSGAAEGALPLAMLDEPLAEELTCENAFVMSYRLLSLYLT--KDLSTETKAVQALCLLFTGCMPLMLTAQRDHVVGRMLTPRGGVARAPVRLQALKSLREVLLAEETRVESGAARARMMQAGVSVRQRVKGDQDAEASIVGGVIQEHLDSIKHLLFDRDDQLRTAALGILSVLHRQGLVNPLQTLPALVALQADPFSAIRAHAYRQLLIEHEKHPEFLPARILEGVSLSYTFQRRILSGRARGGTGELISAVVSSGGGEGGWEGRQSFLGPVYSTCLRQNRKHRYSFLRNLLALFEEKTARDVHAKANRQMLQKQQEXXXXXXXXXRHGNTARHTS----IGVPT------------------AAADPKGQKGSLDPHFLAYVAQLLAYLPFDVQEEPLFLVHSISRTVSLQGLTLLGEMKALLTALGKDRK---------------GKAVGNAAWKGATTLG-CCDEDEDDDYGGMDEVKNG-EGARGTSGYLGVSVPTGSPSRATM---LAQLKDKAGTAMSLCLLLHLKHWLKNVYVLSDERCQEVR 1637
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Match: A0A7S2LBU9_9STRA (Sister chromatid cohesion protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LBU9_9STRA) HSP 1 Score: 243 bits (620), Expect = 3.050e-62 Identity = 269/1022 (26.32%), Postives = 436/1022 (42.66%), Query Frame = 1
Query: 109 LAHDGTLRLSRRLLVERELCSRGLDAILGHLLALLRDPATSFRARAVKRLGGIVDADASIMAREAVRMSVTSSFLDEAVSVRQVA----------------SYRPPLRLTPVSK-----------------LDGFYLPLTTLMYAGVSRAIPRPSR--LPRLSH---------------GFTGTPSRVSRTGGVSRAGLEVSAEDGVVVRPVAVQLMEVVYGVKDNSWLVKLLRGMIFGPGSGDKQRKDCSKKR--EASVRRCKMLVKALVEVQLGLDDGISAVSEGPLKELPKQLLACVDTLSVMCKASPALLAAHVETLLPYLKGENGLSNAEESAVCQQVSDMVYETLPLLQHTDMTRMT--ELSQDLVRLAYRFGSAVVHSSLRCLAR------------QAESLVQLVTHDASPLL---DLLQSFYSRLHCHRNDVRQG---------------------------------ARLEV-------FEILRLYLTTAKDPEIRSKALQGLGQLLIGAPRLMLLADKCGVVGAALEQSAGDAVLAQALRCWKDILAAEEERVETGLAIDDMEAT-GVTVAQRVQGDQDAESSVVGGVLQMHLNAVLSHLFHRNKAVRAAAITLLGVMLRQGLVNPVDVVPQLLALGGD-SAQFVRGEAFRLLTVEDSKNSEFVRTRLLDGLFMAYTFQQLILSDWR-------PLLPSHDPASGGRGGCSLVGPAYTM--CVRPQRPTRYSCLKQLMSLFAETKAREVRSFVQFAQQRVGVVHLAGQDPATRLDGSGTPGVGVTVPPSYRNGGSGVSRAGSLGSMKDGLRTLGPLDVRALSFVCCTLAGLPYEVQEEPLFIVDYVNRQMSLQGSQCLELLHTLLTRNGIQTPPXXXXXXXXXXXXXGGVARSNAVPSASTHADDCADQENQEALQRLHPAKGGTQPDRKYGTFLCASRGLWFRCVLQDGIGRLRRTCSAAAAFSMLLRLKRYLKIAYGLTLAKCQSYRPNDSTKATEKQAQVPNPPPEAF 2814
L DG R+ L+ ELC + +LG +L L+ D S R +VK + +V+ D ++M + VR V+ F DE++SVR+ A ++ PL V K + Y +A + RA R + L H G TG+P++ S+ G ++ + + V+ Q++EVV N L L++G++FG GDK +K+ +K+ E S +CK+LVKAL+E+ L +D + ++ KQL+A + TL V + P L+ HV+TL+PYLKG+NG+ E +AV QVS M+ ++ R+T EL DLV + Y+F S V S++ LA+ Q + L++L T S LL D+ F S R++VR+ A+L++ F + YL+ +D + +L+ + + I PR++L+A++ G++ + + A +V ++LRCW+DIL +EE+R+++G A MEA VT+++R+ GDQD +S++ G VL H + + +++ VR I L+G +LRQGL+NP++ VP LLA+ GD R A +LL E K + +R R+ G+ A+ FQ+ + SD L+ D G + G + A +R ++ R LK ++SLF + DP + S A L P+ L+F L LPY +PLFIV + + +L G L LL GG D C ++ ++++ K G F A +GL + G+L C AA LL+LK++L+ AY ++ A+ SY P++ EK + + PP +F
Sbjct: 542 LTDDGNQRIMTSLVASSELCV-SFNRLLGVILRLMGDKLASLRKLSVKAILQVVNIDPALMTQPTVRKEVSRCFHDESISVREAAVSLVGDYIIQSPNLAAAFHAPLLERIVDKGXXXXXXXXXXXXXXXLSNPTYEGRVAACHAMMQRAADRKEDDGVRDLIHETFHTLWFNSKAFDMGITGSPAK-------SKPG-QLGTKAELYCTEVSAQMVEVVRVSGSNEVLSTLVKGLLFGFAEGDKDKKNVERKKRQEDSHSQCKLLVKALIELLLSFED-----TREHKEDDGKQLVAILATLGVFAQTFPELVVPHVDTLVPYLKGDNGVKRYE-AAVVSQVSSMISGASSHFGSGELNRLTSGELPTDLVNICYKFPSEAVTSAVEALAKLANHPDAASDSIQEKKLLKLATQFYSYLLKTKDVTNDFSSMKKSVRDNVRRALAALGSICRFYECAGAADDHTLDSSVFVIETDVAKLQLDNLSNAAFALFLQYLSK-EDESTKCLSLRAMNGVFISRPRVVLVAEQMGIITSVIGDEAPPSVQIESLRCWRDILISEEKRIDSGAAKAKMEAQKNVTLSKRIGGDQDGDSTISGSVLTKHSERLYALTLSKDEKVRHMIIDLIGHLLRQGLINPMETVPHLLAVQGDVKCPSTRALALKLLQTEGEKRPDMLRQRICAGIKQAFHFQRNVYSDSTNGSAKVTALIAKSD---GPKDGWETIFDAVIKESAIRNKKAQRQGLLKGIISLFEK-------------------------DPDVKY-----------------------SNADQL-----------PM----LAFASEILGNLPYTSLSDPLFIVYHSSCIAALDGQGVLTQFAELL----------------------GG--------------DVCDPNSEEDDIEKVS----------KQGKFDAAQQGLEAKGA---EFGQL---CVEAARILPLLKLKQFLRKAYNISEARVTSYVPSEKELIHEKGISISDGPPFSF 1429
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Match: A0A7S4RR27_9STRA (Sister chromatid cohesion protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RR27_9STRA) HSP 1 Score: 224 bits (571), Expect = 4.020e-56 Identity = 216/794 (27.20%), Postives = 352/794 (44.33%), Query Frame = 1
Query: 595 AVQLMEVVYGVKDNSWLVKLLRGMIFGPGSGDKQRKDCS--KKREASVRRCKMLVKALVEVQLGLDD---GISAVSEGPLKELPKQLLACVDTLSVMCKASPALLAAHVETLLPYLKGENGLSNAEESAVCQQVSDMVYETLPLLQHTDMTRMTELS--QDLVRLAYRFGSAVVHSSLRCLARQAESLVQLVTHDASPLLDLLQSFYSRLHCH--------------RNDV-----------------RQGARLEV----------------------FEILRLYLTTAKDPEIRSKALQGLGQLLIGAPRLMLLADKCGVVGAALEQSAGDAVLAQALRCWKDILAAEEERVETGLAIDDMEAT-GVTVAQRVQGDQDAESSVVGGVLQMHLNAVLSHLFHRNKAVRAAAITLLGVMLRQGLVNPVDVVPQLLALGGD-SAQFVRGEAFRLLTVEDSKNSEFVRTRLLDGLFMAYTFQQLILSDWR-PLLPSHDPASGGRGGCSLVGPAYTMCVRPQRPTRYSCLKQLMSLFAETKAREVRSFVQFAQQRVGVVHLAGQDPATRLDGSGTPGVGVTVPPSYRNGGSGVSRAGSLGSMKDGLRTLGPLDVRALSFVCCTLAGLPYEVQEEPLFIVDYVNRQMSLQGSQCLELLHTLLTRNGIQTPPXXXXXXXXXXXXXGGVARSNAVPSASTHADDCADQENQEALQRLHPAKGGTQPDRKYGTFLCASRGLWFRCVLQDGIGRLRR---TCSAAAAFSMLLRLKRYLKIAYGLTLAKCQSYRPNDSTKATEK 2778
A Q++EVV + +L +++ ++FG G G K+RK KK+EA+ C LV +L+E LG ++ EG +QL+A + TL V +ASP L+ H++TLLPYLK +NG+S +ESA+ VS +V P L +D+ R+TE S DLV + Y GS+ V +++ LA+ A S + L+ L+ +FY L+ RN+V ++GA V + + R+++ KD + KAL+ + I PRLML + GV+ + A ++ ++L+CW DIL +EE R+E+G A ++M+ +T + ++ GDQD +S++VGGVL H + + + + A+R A + L+G +LRQGL+NP++ VP LLAL GD + +R A +LL E K + +R R+ G+ A+ FQ+L+ + + D G + G + +R R R K L+SLF + +P+ + +G T S + +S A + PL L F L LPY ++PLFI+ ++ +LQG+Q L+ AV + + D ++ +++ L+R AK K F ++ + LR C A++ +LLRLK YLK A+ L+ + Y P+ K +K
Sbjct: 968 AKQMVEVVASSGNADFLTDMVKELLFGLGDGIKERKKAERRKKQEAAQSHCGNLVSSLIEQLLGFEEIRKHADKTKEG------QQLVAMISTLGVFAQASPLLIQNHLDTLLPYLKADNGVSKEQESAMVIVVSKIVSRVAPTLTTSDVKRVTEGSVCADLVSITYNLGSSTVSAAVEALAKLA-SHRDAGEGSSEKLMGLVNAFYRYLYKAKGTADDFSAVKANVRNNVHRALSALGSVCRYHEGDKKGASDHVDPTALVVISPSKLSWSNLSDACYAMFRVFIEK-KDVGTKCKALRAMCGAFIARPRLMLAVEHTGVLSDVMSDKAHPDLILESLKCWCDILLSEERRIESGEAKEEMDMKESITTSVKISGDQDGDSTLVGGVLTQHSSRLYKLTTNTSPAIRHACVELIGHLLRQGLINPMETVPYLLALQGDVGSPLIRQLALKLLIKEGLKRPDMLRQRVCAGVKQAFVFQRLVYPNSTVTAVIEQDTGDGITETECIFGLIFKELIRSSRVQRQGLFKSLLSLFGADGIDD--------------------EPSLTI-------IGATKKSSQKK----LSIAEQI-----------PL----LQFATQILGFLPYNSAQDPLFIIYNISGVTALQGAQFLDEF---------------------------------AVFTCADRYD--SENHSEDDLERA--AKAANPSKTK------------FAAIVNEPSFDLRNFGDICLKASSLVLLLRLKSYLKKAFNLSDTRIMEYLPSQKEKPFDK 1658
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Match: A0A1E7FX63_9STRA (Sister chromatid cohesion protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX63_9STRA) HSP 1 Score: 221 bits (564), Expect = 2.770e-55 Identity = 209/791 (26.42%), Postives = 344/791 (43.49%), Query Frame = 1
Query: 601 QLMEVVYGVKDNSWLVKLLRGMIFGPGSGDKQRKDCSKKREASVRR--CKMLVKALVEVQLGLDDGISAVSEGPLKELPKQLLACVDTLSVMCKASPALLAAHVETLLPYLKGENGLSNAEESAVCQQVSDMVYETLPLLQHTDMTRM--TELSQDLVRLAYRFGSAVVHSSLRCLARQAESLVQLVTHDA---SPLLDLLQSFYSRL-----------------HCHRN-----------------------------DVRQGARLEVFEILRL-----------YLTTAKDPEIRSKALQGLGQLLIGAPRLMLLADKCGVVGAALEQSAGDAVLAQALRCWKDILAAEEERVETGLAIDDMEAT-GVTVAQRVQGDQDAESSVVGGVLQMHLNAVLSHLFHRNKAVRAAAITLLGVMLRQGLVNPVDVVPQLLALGGDSAQFVRGEAFRLLTVEDSKNSEFVRTRLLDGLFMAYTFQQLILSDWRPLLPSHDPASGGRGGCSLVGPAYTMCVRPQRPTRYSCLKQLMSLFAETKAREVRSFVQFAQQRVGVVHLAGQDPATRLDGSGTPGVGVTVPPSYRNGGSGVSRAGSLGSMKDGLRTLGPLDVRALSFVCCTLAGLPYEVQEEPLFIVDYVNRQMSLQGSQCLELLHTLLTRNGIQTPPXXXXXXXXXXXXXGGVARSNAVPSASTHADDCADQENQEALQRLHPAKGGTQPDRKYGTFLCASRGLWFRCVLQDGIGRLRRTCSAAAAFSMLLRLKRYLKIAYGLTLAKCQSYRPNDSTKATEK 2778
Q++EVV L L R M+ DK +K ++K+ + + + MLV +L E+ L +++ +E P E +++ TL V ASP+ + H++TLLPYLK +NGL + +E+ + + ++ +P L H D R+ T ++ DLV + R+G A + S+++ L A+ +L H LL L ++FYS L H R + + EV +LR+ Y D I+ ALQ L + + PR ML + GV+ + ++ + V ++LRCW+DIL AEE RVE+G A M++ +TV++++ GDQDA++++ GG+L H + + HR+K +R AA+ LLG +LRQG +NP + P LLAL GD + +RG+A + L +E K + +R RL G+ AY FQ ++ + LV + + VR + C+ S++ E S + +QR G+ ++ T D P + +NG S D D+ LSF LA LPY V + L+I+ Y++ ++LQG+ L+ L G+ + DD D N E + + T+P + + + F + G +L CS A +LLRLK +L+ Y L+ ++C + P D+ + EK
Sbjct: 913 QMVEVVKAANTEHDLTLLFREMLSDTPDSDKTKKSSARKKRSGLAKNHIAMLVDSLFEMLLAVEED----NEKPTIEKGGDIVSIFRTLRVFTDASPSDVLRHLDTLLPYLKIDNGLKHIDEAEIACSLCQILSRVVPELDHEDCERLSGTSVADDLVAITKRWGKAALSSAVQTLCLFADK--ELSDHSGIFEKRLLSLAKTFYSYLVKTEKSGDYTTKKKTKDHVQRGLSVLGSICQYCTSSSFDSMEIEDXXXXXXETGSSLKAEVVTLLRIAPLCEVIFMKYYDNVTIDVMIKVSALQALSGVFMAHPRQMLKLEMSGVITEVMADTSPEPVQRESLRCWRDILLAEESRVESGEAKARMDSKKNITVSKKISGDQDADATLFGGILTNHASRLFEMTKHRDKEIRFAAVDLLGHLLRQGQLNPNEATPHLLALQGDIEESIRGKALKFLMLEGEKRPDMLRQRLSAGVKQAYLFQIVVFPE-------------------LVDVSALISVRKDGILQKECV--FASVYKE-------SIAKIKKQRRGLF----RNLLTLFD-----------PQNLKNGHS---------KQNDSYTN----DLMLLSFTSQILAYLPYSVPSDVLYIIYYISSNIALQGADLLDKFAAFLRPYGLAS-------------------------------DDELDDVNSEEDELEIAVRNHTEPSKNIAVL--SKQNPPFN---KSGFAKL---CSEAGCLILLLRLKGFLREIYNLSESRCSGFNP-DAKEVGEK 1601
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Match: K0SHJ0_THAOC (Sister chromatid cohesion protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SHJ0_THAOC) HSP 1 Score: 221 bits (564), Expect = 3.010e-55 Identity = 259/1018 (25.44%), Postives = 412/1018 (40.47%), Query Frame = 1
Query: 55 AHLLGQWEPAGLSKD---SLTLAHDGTLRLSRRLLVERELCSRGLDAILGHLLALLRDPAT-SFRARAVKRLGGIVDADASIMAREAVRMSVTSSFLDEAVSVRQVA-SYRPPLRLTPVSKLDGFYLPLTTLMY-AGVS---RAI----------PRPSRLPRLSH-------------GFTGTPSRVSRTGGVSRAGLEVSAEDGVV---------VRPVAVQLMEVVYGVKDNSWLVKLLRGMIFGPGSGDKQRKDCSKKREA--SVRRCKMLVKALVEVQLGLDDGISAVSEGPLKELPKQLLACVDTLSVMCKASPALLAAHVETLLPYLKGENGLSNAEESAVCQQVSDMVYETLPLLQHTDMTRMTE--LSQDLVRLAYRFGSAVVHSSLRCLARQA------------ESLVQLVTHDASPLLDLLQS---------------------------FY---SRLHCHRND------VRQGARLEV---------FEILRLYLTTAKDPEIRSKALQGLGQLLIGAPRLMLLADKCGVVGAALEQSAGDAVLAQALRCWKDILAAEEERVETGLAIDDMEATG-VTVAQRVQGDQDAESSVVGGVLQMHLNAVLSHLFHRNKAVRAAAITLLGVMLRQGLVNPVDVVPQLLALGGD-SAQFVRGEAFRLLTVEDSKNSEFVRTRLLDGLFMAYTFQQLILSDWRPLLPSHDPASGGRGGCSLVGPAYTMCVRPQRPTRYSCLKQLM--SLFAETKAREVRSFVQFAQQRVGVVHLAGQDPATRLDGSGTPGVGVTVPPSYRNGGSGVSRAGSLGSMKDGLRTLGPLDVRALSFVCCTLAGLPYEVQEEPLFIVDYVNRQMSLQGSQCLELLHTLLTRNGIQTPPXXXXXXXXXXXXXGGVARSNAVPSASTHADDCADQENQEALQRLHPAKGGTQPDRKYGTFLCASRGLWFRCVLQDGIGRLRRTCSAAAAFSMLLRLKRYLKIAYGLTLAKCQSYRPNDSTKATEKQAQV 2790
AH + QW+P + + + L G R L+ EL S +LG LL L+ D +T S R ++K +V+ D S+M +V+ V F D+A+SVR+ A L + F+ PL M G+S RA+ P S + H G T S EV + +G R VA Q+ EVV L L+ G++FG GDK +K +K+ S +C LV ALVE+ L ++ S ++ K+L+A + TLSV +A P LL HV+TL+PYLKG+NG E+++ S ++ +P ++ R++ L DLV +AY+F V S++ LA A + L+ + S LL + S FY S + H +D V + L+ F + R YL KD + AL+ + + I PR++L A++ G++ + + A +V ++L+CW+DIL AEE+R+E+G A M A V +++R+ GDQD ++ + G VL H + ++ VR I L+G +LRQGL+NP++ VP LLA+ GD + R A +LL E K E +R R+ G+ AY FQ + + + GRG +L+ R C+ + + ++ E+ + R+ Q + G++ L +DP + D S P LSF LA LPY +PLF V + +L G ++ L ++ GG D C ++ +++ K G +K+G L+ + C A+ LL LK +L+ AY L+ A+ Y P++ + EK +
Sbjct: 837 AHAIAQWQPPTVQQQYNLNAQLTEHGNKRTLASLVASSEL-STSFPRLLGVLLRLMGDSSTTSLRKLSLKSFLRVVNNDPSLMTHSSVKKEVARCFHDDAISVREAAVGLVGDYVLHSPNLAKVFHAPLLERMKDKGISVRKRAVKIFRDMLLSNPSYSGRAQACHVMLLRAADRKEDDGVRDLVHETFHTLWFSGKAFEVGSSNGAADKTTKAQLYAREVATQMTEVVKVSGSPEVLTSLVTGLLFGFSEGDKDKKVAERKKRQVDSKNQCHSLVLALVELLLSFEE-----SRQHKEDDGKELVALLSTLSVFAEAYPELLVGHVDTLIPYLKGDNGGGKKYEASIVSTCSAIITLAVPHFSAVELHRLSNGGLPADLVNIAYKFPPTAVSSAVETLATLANHPGSKEGNVPEKKLITMARQFYSYLLKQMDSTCDFSGSKKSIRDNVKRALSALGSICRFYECDSAIDAHNHDPNGFQIVAEPKSLKFEGNMLSDASFALFRSYLAK-KDESSKVLALRAMNGVFISRPRVVLAAEQLGIISSVISDDAPPSVQIESLKCWRDILLAEEKRIESGAARAKMMAEKKVALSKRISGDQDGDACISGSVLTKHARRLYEMKESKDDKVRLMVIDLIGHLLRQGLINPMETVPHLLAVQGDVKSPQTRALALKLLINEGEKRPEMLRQRVCAGIVQAYHFQNSVYN------------ASGRGATALL----------TRDEAGRCVTETIFDAVIKESGMKNKRAQRQGLLK--GILSLFEKDPGEQFDHSKLP---------------------------------------LLSFAAEILAHLPYTTLNDPLFCVYNASCISTLDGQTVVKALAEVV----------------------GG--------------DVCDPNSGEDEIEQA--VKKGNFDAKKFG--------------LKGKEKEFGQLCVDASRIIPLLLLKNFLRKAYNLSEARIVEYLPSEKERINEKGVSI 1732
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Match: A0A7S2UG10_9STRA (Sister chromatid cohesion protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UG10_9STRA) HSP 1 Score: 221 bits (563), Expect = 3.190e-55 Identity = 198/753 (26.29%), Postives = 327/753 (43.43%), Query Frame = 1
Query: 109 LAHDGTLRLSRRLLVERELCSRGLDAILGHLLALLRDPAT-SFRARAVKRLGGIVDADASIMAREAVRMSVTSSFLDEAVSVRQVA-----SYRPPLRLTPVSKLDGFYLPLTTLMYAGVS---RAIP--RPSRLPRLSHG---------------------------------FTGTPSRVSRTGGVSRAGLEVSAEDGVV----------------------VRPVAVQLMEVVYGVKDNSWLVKLLRGMIFGPGSGDKQRKDCSKKREA--SVRRCKMLVKALVEVQLGLDDGISAVSEGPLKELPKQLLACVDTLSVMCKASPALLAAHVETLLPYLKGENGLSNAEESAVCQQVSDMVYETLPLLQHTDMTRMTE--LSQDLVRLAYRFGSAVVHSSLRCLARQAESLVQLVTHDASPLLDLLQSFYSRLHCHRNDVRQGARLEV-------------------------------------------------------FEILRLYLTTAKDPEIRSKALQGLGQLLIGAPRLMLLADKCGVVGAALEQSAGDAVLAQALRCWKDILAAEEERVETGLAIDDMEAT-GVTVAQRVQGDQDAESSVVGGVLQMHLNAVLSHLFHRNKAVRAAAITLLGVMLRQGLVNPVDVVPQLLALGGD-SAQFVRGEAFRLLTVEDSKNSEFVRTRLLDGLFMAYTFQQLILSDWRPLLPSHDPASGGRGGCSLVGPAYTMCVRPQRPTRYSCLK 1986
L+ +G ++ R L+ R + +LG L+ L+ D T S R AVK + +V D +M + VR++V F DEA+SVR+ A SY L+ V++ L L + GVS RA+ R + S+G + G ++ ++ G V A + + A Q++EVV +L +++ ++FG G G K K +K+ + C LV AL+E L +D + + L+A ++TLSV +ASP+L+ H++TL+PYLKG+NG+SN E+A+ VS ++ T P+L D + + ++ DLV++ YRF + + S++ L+ + LL L SFY L+ R+ V + ++V + + LYL P + AL+ +G + I PR+ML ++ G++ + A +AL+CWK+IL +EE R+E+G A + M+ +T +++V GDQD +SS+ GGVL H + + N +R A L+ ++LRQG +NP++ VP L AL GD A VR A +LL +E +K + +R R+ G+ A+TFQ+ + D + P G S+ + V+P + R K
Sbjct: 744 LSTEGNDKIMRALVATRSELTLSFPRLLGVLVGLMGDDDTVSLRKLAVKAISQVVQIDPILMIQPTVRVAVAKRFQDEAISVREAAVSLVGSY--VLQAPMVARAFHSSL-LACIGDPGVSVRKRAVKIFRDLLMSNPSYGGRAQACTAMLKAAADSKEDDGVRDLIYEAFQSLWFGDDDGINIGDSIAAEGALVDASQAEIKGKVSRRKKHKASMAAEHRQIRCKATASQMVEVVASSGSAEFLTNIVKELLFGLGEGSKGNKAVERKKRQRFAQNHCASLVAALIEQILAFEDSRTQAKNNVAAG--RNLVALIETLSVFAEASPSLVVLHLDTLIPYLKGDNGVSNENEAAIVTSVSKIISCTTPVLSDKDALLLLQGTVADDLVKITYRFRAGAIASAIEALSLLTSHSGATGSSQDKKLLKLATSFYGYLYKMRSSVDDFSTIKVATRNNVHRALSVLGSICRFHHVGMKSIETNNDEDPTTFPVLDPADVSWGNLSNASYAVFVLYLGKEDSPT-KCAALKAMGGVFIARPRVMLAVEQTGIIADVMSNEAHPDFQLEALKCWKEILVSEERRIESGAAKEQMDRQEDITASKKVSGDQDGDSSIFGGVLAQHSSRLYQITSCGNAKLRLACCDLISILLRQGQINPMETVPYLFALQGDIGAPDVRALALKLLIIEGTKRPDMMRQRVRAGIKRAFTFQREVYPDKKATAVICSPGGGVE---SIFASIFKESVQPSKVQRQGVFK 1487
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Match: B8BTF2_THAPS (Sister chromatid cohesion protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTF2_THAPS) HSP 1 Score: 218 bits (556), Expect = 3.080e-54 Identity = 245/1025 (23.90%), Postives = 420/1025 (40.98%), Query Frame = 1
Query: 55 AHLLGQWEPAGLS-KDSLTLAHDGTLRLSRRLLVERELCSRGLDAILGHLLALLRDPATSFRARAVKRLGGIVDADASIMAREAVRMSVTSSFLDEAVSVRQVA----------------SYRPPL-------------RLTPVSK----LDGFYLPLTTLMYAGVSRAIPRPS----------RLPRLSHGFTGTPSRVSRTGGVSRAGLEVSAEDGVVVRPVAVQLMEVVYGVKDNSWLVKLLRGMIFGPGSGDKQRK--DCSKKREASVRRCKMLVKALVEVQLGLDDGISAVSEGPLKELPKQLLACVDTLSVMCKASPALLAAHVETLLPYLKGENGLSNAEESAVCQQVSDMVYETLPLLQHTDMTRMT--ELSQDLVRLAYRFGSAVVHSSLRCLAR------------QAESLVQLVTHDASPLL---DLLQSFYSRLHCHRNDVRQ-----GARLEVFEI------------------------------------LRLYLTTAKDPEIRSKALQGLGQLLIGAPRLMLLADKCGVVGAALEQSAGDAVLAQALRCWKDILAAEEERVETGLAIDDMEAT-GVTVAQRVQGDQDAESSVVGGVLQMHLNAVLSHLFHRNKAVRAAAITLLGVMLRQGLVNPVDVVPQLLALGGD-SAQFVRGEAFRLLTVEDSKNSEFVRTRLLDGLFMAYTFQQLILS---DWRPLLPS--HDPASGGRGGCSLVGPAYTM--CVRPQRPTRYSCLKQLMSLFAETKAREVRSFVQFAQQRVGVVHLAGQDPATRLDGSGTPGVGVTVPPSYRNGGSGVSRAGSLGSMKDGLRTLGPLDVRALSFVCCTLAGLPYEVQEEPLFIVDYVNRQMSLQGSQCLELLHTLLTRNGIQTPPXXXXXXXXXXXXXGGVARSNAVPSASTHADDCADQENQEALQRLHPAKGGTQPDRKYGTFLCASRGLWFRCVLQDGIGRLRRTCSAAAAFSMLLRLKRYLKIAYGLTLAKCQSYRPNDSTKATEKQAQV 2790
+H++ QW GL K L DG R+ ++ EL S +LG LL L+ D S R +VK + +++AD ++M +AVR ++ F D+A+SVR+ A ++ PL R+ + + + Y M+ + RA R L L + + S++ + + R A Q++EVV + L L++G++FG GDK +K + K++E ++ + LV +L+E+ L ++ + + K+L+A + TL V ++ P L+ H++TL+PYLKG+NG + E+A+ VS ++ + +++ R+T EL DLV +AY+F + S++ L + Q + L++L S LL D +F + R++V++ G+ +E L L +D + AL+ + + I PR++L A++ G++ + + A V + LRCW+DIL AEE+R+E+G A M A G+T+++R+ GDQD +SS+ G VL H + + + VR L+G +LRQGL+NP+D VP LLAL GD + R A +LL E K + + R+ G+ A+ FQ+ + S D P + + + G + + + + +R ++ R K ++SLF + E + G+ P G VP L+F LA LPY +PLF+V + +L G Q + L N I P A++++ E +L K + + L + F C G L C A+ S+LL+L+ +L+ AY L+ + Y P++ + EK +
Sbjct: 982 SHVISQWSSVGLQPKHQAHLTSDGITRIMSSVVASTEL-STSFPRLLGVLLKLMGDDMASLRKLSVKAVLQVINADPALMDNKAVRAQISRCFHDDAISVREAAVSLVGDYVIQSPNLATTFHTPLLERILDRGVSVRKRIVKIFRDILLKNPAYKGRAPAMHCMLQRAADRKEDDGVRDLVHETLHTLWFNTNAFNLSTASSDPSSKSKFQAGVKAQFYCREAATQMVEVVKFSGNPEVLASLVKGLLFGFVEGDKDKKIAERRKRQEDALAMSQNLVSSLIELLLAFEESRTNNDDDG-----KELVAILSTLGVFSQSYPDLMIPHIDTLIPYLKGDNG-AKKYEAAIVGTVSGIISRVASHISVSELNRLTSGELPTDLVNIAYKFPGEAISSAVETLCKLANHRDAKPGSIQEKKLLKLAVQFYSYLLKTKDASSNFMTMKKSVRDNVKRALSALGSICRFYECDDAIDQHIIDTSTFQVITDLSQLNFTGNALSNASFALFLEYLNKEDEATKCLALKAMNGIFISRPRVVLAAEQLGIITEVMSEEAPATVQVECLRCWRDILLAEEKRIESGEAKAKMAAQKGITLSKRISGDQDGDSSISGSVLTKHAVRLYELTTSKEEKVRNMICDLIGHLLRQGLINPMDTVPFLLALQGDVKSPSTRALALKLLVNEAEKRPDIMNQRIQAGIKRAFNFQRTVYSEETDGAPRVTALIENKVEGVKTATETIFDSVIIESSLRSKKAQRQGLYKSIISLFEKDVTHETTPTNE------------GKAP--------NHGAADRVP--------------------------------LLAFASQILAHLPYNCASDPLFVVYHATSITALDGHQ-ITTRFAELVGNDICDPN--------------------------------AEEDDLEKAAKLKDPKSSS-----FARKLISDEN--FNC---SGFAEL---CVKASGLSLLLKLRNFLRKAYNLSETRITEYVPSEKDRINEKGISI 1901 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig171.3966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig171.3966.1 >prot_H-paniculata_contig171.3966.1 ID=prot_H-paniculata_contig171.3966.1|Name=mRNA_H-paniculata_contig171.3966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1059bp VARRQRGDGVGGGGGGAAAHLLGQWEPAGLSKDSLTLAHDGTLRLSRRLLback to top mRNA from alignment at H-paniculata_contig171:482..37235+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig171.3966.1 ID=mRNA_H-paniculata_contig171.3966.1|Name=mRNA_H-paniculata_contig171.3966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=36754bp|location=Sequence derived from alignment at H-paniculata_contig171:482..37235+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig171:482..37235+ >mRNA_H-paniculata_contig171.3966.1 ID=mRNA_H-paniculata_contig171.3966.1|Name=mRNA_H-paniculata_contig171.3966.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6354bp|location=Sequence derived from alignment at H-paniculata_contig171:482..37235+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |