mRNA_H-paniculata_contig10608.396.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10608.396.1
Unique NamemRNA_H-paniculata_contig10608.396.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Match: A0A6H5K9Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q8_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 6.480e-104
Identity = 195/442 (44.12%), Postives = 246/442 (55.66%), Query Frame = 3
Query:   30 IRQPVLFLVWLLPQTFLVTSLITRPSPARFPAEVLWRNGKNVQHSASNVEKVVGNRREEAAGKASHPEAEALVSDLLQCFQGEFDNYDQVVEDRAAGMAAGPGGGHEHIHCSLTLLDELLLPKQILRQQHGERRASKGAVEGRGGGRESRSNQETRGAELELEERLLAVVAAKYFFNGDASIVFRYRLYSFHPCPQQG-ASRGGAMMRLWRLIPSIEKRLRATGYDLTSFQWQEEEVGNIMGEEHVGDNNAAAGE-KPDLTASHEVAECMHGCEIYWSR--------SGLKNGEGGRQKSSVASTSQVEQQEG----GGEERLFLGLMGEDDEGTWVASQNMQGLEILIKDDLKVWSDRLWVNDRGFDREGKFVYGNQRGVPYKLKRVNPGDDDDELNWTVGEQHRTPELYAEKMSAIGIVPGQRSGPP*AATAAVSAKGNG 1313
            +++ VL L+ ++P   L+ S     S          R  + VQ S ++V+           G +     +A+VS+LLQ FQGEFDNYDQVV DR AGM  GPGGGHEHIHCSL  LD   +P Q+                                       R LAVVAAKY+FNGD+++VFRYRLYSFH CP     +RG A+MRLWRL+P +E RLRA  YDLTSF W +++  +   E   G +NA+      +    ++V E M GCEIYW R          +  G  G  K      +  E+  G    GG  + F+GLMG+DD GTWV SQN+ GLEIL+KDDL++W D LWVNDRGFDR+G FVYGNQR VPYK++RV  G     L WT+G +HRT + YAEKMSAIG+  GQR  PP    A     G G
Sbjct:    2 MQRVVLLLLQVVPSAGLLVSWTASRS----------RLSQKVQRSCTSVDS-----HTPGGGLSGDEPRDAMVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKQLDPAEVPGQVAAXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXRPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRANSYDLTSFSWSDDD--SNQREPSRGSDNASNDRCSKEGRTGNDVVERMFGCEIYWGRHQAGGEDEKSMPGGISGPGKQDANGGAVPERGAGEDAAGGGGKSFVGLMGKDDSGTWVESQNVDGLEILVKDDLRLWPDSLWVNDRGFDRDGNFVYGNQRDVPYKMRRVTAGGP---LEWTLGARHRTEKTYAEKMSAIGVTLGQRLRPPVRVAAPAGTGGTG 418          
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Match: D7G1T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T3_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 7.870e-46
Identity = 76/112 (67.86%), Postives = 90/112 (80.36%), Query Frame = 3
Query:  939 GGEERLFLGLMGEDDEGTWVASQNMQGLEILIKDDLKVWSDRLWVNDRGFDREGKFVYGNQRGVPYKLKRVNPGDDDDELNWTVGEQHRTPELYAEKMSAIGIVPGQRSGPP 1274
            GG  + F+GLMGEDD GTWV SQN+ GLEIL+KDDL++W DRLWVNDRGFDR+G FVYGNQR VPYK++RV  G     L WT+G +HRT + YAE+MSAIG+ PGQR GPP
Sbjct:   29 GGGGKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGP---LEWTLGARHRTEKTYAERMSAIGVTPGQRLGPP 137          
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Match: A0A5J4Z4Z5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Z5_PORPP)

HSP 1 Score: 145 bits (365), Expect = 6.400e-34
Identity = 108/364 (29.67%), Postives = 144/364 (39.56%), Query Frame = 3
Query:  102 PSPARFPAEVLWRNGKNVQHSASNVEKVVGNRREEAAGKASHPEAEALVSDLLQCFQGEFDNYDQVVEDRAAGMAAGPGGGHEHIHCSLTLLDELLLPKQILRQQHGERRASKGAVEGRGGGRESRSNQETRGAELELEERLLAVVAAKYFFNGDASIVFRYRLYSFHPCPQQGASRGGAMMRLWRLIPSIEKRLRATGYDLTSFQWQEEEVGNIMGEEHVGDNNAAAGEKPDLTASHEVAECMHGCEIYWSRSGLKNGEGGRQKSSVASTSQVEQQEGGGEERLFLGLMGEDDEGTWVASQNMQGLEILIKDDLKVWSDRLWVNDRGFDREGKFVYGNQRGVPYKLKRV--NPGDDDDELNWT 1187
            P   R PA   W +     +S  NV          A        A+  +   +  F+G+FDNYDQV+E++  G   G GGGHEHIHC L+ + E                                 N               +++ AKY+FNGD + V+R R+Y           +G   MR++R     E RLRA GY +    W              GD               ++ E + GCE++W R   K  +   Q   +                 F G M     G  V S  M+   IL+KDDL +  + LWVNDRGFD  G FVYGN+RGVPYK+KR   NP      L WT
Sbjct:  227 PDAQRIPARTSWSS----PYSPENV----------ARRMLRRAMAQRNLDLFMTSFEGDFDNYDQVLENKRLGFTEGEGGGHEHIHCKLSRIGE---------------------------------NS--------------SMIFAKYYFNGDPNSVYRARVYEIFL--DDSDDKGVIEMRIYRFYAETEARLRACGYRINEIDW-------------TGD---------------DLYEWLQGCEVFWERRKFKTAQALEQSEIIGPF-------------FFRGFMAGG--GCTVFSPTMKS-RILVKDDLILTGNELWVNDRGFDENGHFVYGNRRGVPYKMKRTSCNP-----HLEWT 478          
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Match: K0TER5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER5_THAOC)

HSP 1 Score: 135 bits (339), Expect = 4.390e-31
Identity = 106/362 (29.28%), Postives = 148/362 (40.88%), Query Frame = 3
Query:  255 LLQCFQGEFDNYDQVVEDRAAGMAAGPGGGHEHIHCSLTLLDELLLPKQILRQQHGERRASKGAVEGRGGGRESRSNQETRGAELELEERLLAVVAAKYFFNGDASIVFRYRLYSFHPCPQQGASRGGAM--MRLWRLIPSIEKRLRATGYDLTSFQWQEEEVGNIMGEEHVGDNNAAAGEKPDLTASHEVAECMHGCEIYWSRSG--------LKNGEGGRQKSSVASTSQVEQQEGGGEERLFLGLMGEDDEGTWVASQNM-QGLEILIKDDLKVWSDRLWVNDRGFDREGK-----------FVYGNQRGVPYKLKRVN-----PGDD------DDELNWTVGEQHRTPELYAEKMSAI 1241
            L   FQG+FDNY+QVV DR  G+  G GGGHEHIHC+L    +                                      G + E + R    + A ++FNG+   +FR+R Y        G   G A+  M+L  L P +E+ LR    +  S  W         GE+    +       P       +   + GC++ W            L N     + + + S               F   M     G  V S +M  G  ILIKD+L +W D+ W+NDRG+D +G+           FVYGN+RGVPYKL+RV+      G +        EL WT+G  +RTP  Y  K+ AI
Sbjct:   80 LTSTFQGDFDNYNQVVLDRQHGLTPGAGGGHEHIHCTLVPCPDF-------------------------------------GDDAEGDTRRSRWILAAFYFNGNPQQIFRFRAYQLWAPDHDGMDDGSAVVRMKLNTLSPILEQALRKRSEEPCS--WWRTAWKVWSGEDKKKFHEDII---PWSQFIPSLVSPLQGCDVLWEEDWDAAKHSYLLDNAYNSDESNDITSFCDTS----------FHATMEAGSSGAIVDSISMIPGQRILIKDELSLWEDKFWINDRGYDPDGETDSMNENQDMPFVYGNRRGVPYKLERVSHIVSTAGAELQVAPVSGELQWTLGGSYRTPGEYEAKLKAI 389          
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Match: A0A7S4N064_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N064_9STRA)

HSP 1 Score: 122 bits (307), Expect = 6.220e-27
Identity = 107/376 (28.46%), Postives = 160/376 (42.55%), Query Frame = 3
Query:  255 LLQCFQGEFDNYDQVVEDRAAGMAAGPGGGHEHIHCSLTLLDELLLPKQILRQQHGERRASKGAVEGRGGGRESRSNQETRGAELELEERLLAVVAAKYFFNGDASIVFRYRLYSFHPCPQQGASRGG---------------AMMRLWRLIPSIEKRLRATGYDLTSFQWQEEEVGNIMGEEHVGDNNAAAGEKPDLTASHEVAECMHGCEIYWSRSGLKNGEGGRQKSSVASTSQVEQQEGGGEERLFLGLMGEDDEGTWVASQNMQGLEILIKDDLKVWSDRLWVNDRGF----DR--------EGKFVYGNQRGVPYKLKRV--------NPGDDDDE-----------LNWTVGEQHRTPELYAEKMSAIG 1244
            L+   QG+FDNY QV  DR+ GM    GGGHE +HC++  ++   L             A  GA+    GG              E E    A V + ++F+G    +FR+R+Y+ + C      RGG               A MRL+ L PS+E  LRA   D    +W    + +++ E+    N                   + GC++ W+ +        R + + A+ ++ E        R    +M  D  G  V S    G  + ++D+L +W D LW+NDRGF    DR        E  +VYGN+RGVPY ++R         + GDDDD+           L WT+G   R  + Y E+M A+G
Sbjct:   34 LVSRLQGDFDNYRQVERDRSEGMLPREGGGHEWMHCTVVPVEGRALE------------ALNGAIAAPRGG--------------EGEGEADAAVLSAFYFDGVPERIFRFRMYALNYC------RGGDXXXXXXXXXXXGESARMRLYTLGPSVEGPLRAAP-DAPE-RWGGALMASLLREDG---NEEGXXXXXXXXPRPPPFRLLEGCDVLWTPTPH------RTRHAYAARNRPE--------RALHAVMTND--GAVVPSVMKPGTYLRVRDELSLWEDELWINDRGFAPECDRTDDPGNIGEDDWVYGNRRGVPYAMERAARFSTVDGDGGDDDDDAVFAREVVDAALAWTMGSSWRDEDEYCERMEAVG 356          
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Match: B7G7Q1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Q1_PHATC)

HSP 1 Score: 120 bits (302), Expect = 1.090e-26
Identity = 102/346 (29.48%), Postives = 138/346 (39.88%), Query Frame = 3
Query:  255 LLQCFQGEFDNYDQVVEDRAAGMAAGPGGGHEHIHCSLTLLDELLLPKQILRQQHGERRASKGAVEGRGGGRESRSNQETRGAELELEERLLAVVAAKYFFNGDASIVFRYRLYSFHPCPQQGASRGGAMMRLWRLIPSIEKRLRATGYDLTSFQWQEEEVGNIMGEEHVGDNNAAAGEKPDLTASHEVAECMHGCEIYWS--------RSGLKNGEGGRQKSSVASTSQVEQQEGGGEERLFLGLMGEDDEGTWVASQNMQGLEILIKDDLKVWSDRLWVNDRGFDREG-KFVYGNQRGVPYKLKRV-----NPGDD--DDELNWTVGEQHRTPELYAEKMSAIG 1244
            LL  FQG+FDNY+QV+ DR  G+    GGGHEHIHCSL  + E                                              RL A     ++F+G    +FR+R Y   P  +           L  L P +E+RLR    D +S+    EE G + G                        + +  C++ WS           L  G  G     V   + VE                         SQ M G +ILIKD L +W D LW++DRGFD +  +F+YGNQRGVPY+L+RV     N G     ++L WT+G   R+   Y +KM A+G
Sbjct:   66 LLDRFQGDFDNYNQVIHDRKKGLLPREGGGHEHIHCSLVPVSETA--------------------------------------------RLAA-----FYFDGVPGAIFRFRFYDLIPVDESTIDTV-----LHTLHPELERRLRRCP-DPSSWPLFFEEFG-VKGR----------------------VQLLPKCDVRWSWVLDPVQHDYALDEGPNGLHAVMVHGEALVE-------------------------SQMMPGQKILIKDQLSLWPDELWIHDRGFDPDTMRFIYGNQRGVPYRLERVTDIALNNGRTIVQEDLAWTLGPDFRSEGEYQDKMVAVG 308          
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Match: A0A7S2PZJ6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PZJ6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 8.160e-26
Identity = 111/404 (27.48%), Postives = 158/404 (39.11%), Query Frame = 3
Query:  219 ASHPEAEALVSDLLQCFQGEFDNYDQVVEDRAAGMAAGPGGGHEHIHCSLTLLDELLLPKQILRQQHGERRASKGAVEGRGGGRESRSNQETRGAELELEERLLAVVAAKYFFNGDASIVFRYRLYSFHPCPQQGASRGGAM------MRLWRLIPSIEKRLRATGYDLTSFQWQEEEVGNIMGEEHVGDNNAAAGEKPDLTA------SHEVAECMHGCEIYWS-------RSGLKNGEGGRQKSSVASTSQVEQQEGGGEERLFLGLMGEDDEGTWVASQNM-QGLEILIKDDLKVWSDRLWVNDRGFDREG--------------------KFVYGNQRGVPYKLKRV--------NPGDDD---------------DELNWTVGEQHRTPELYAEKMSAI 1241
            A+  +++     LL  FQG+FDNY QV+ DR   +A   GGGHEHIHC+L        P   + Q                   E R N +               + A ++FNG+   +FR+R+Y     PQ   S    +      M+L  L   +E++LR   Y      W  E     +   + G+N +      +          H V+  + GC++ W         + L   E G   SS  +T        G    +  G       G  V S ++  G  ILIKD+L +W D  W+NDRG+D +                      FVYGN+RGVPYKL+RV        N G DD                EL WT+G+  R    Y EK+ A+
Sbjct:   51 ATSDDSDNYFHHLLSQFQGDFDNYHQVIRDRNHALAPADGGGHEHIHCTLVPC-----PHTAVTQ-------------------EQRQNNDQ-------------WILAAFYFNGNPRQIFRFRMYKLIS-PQDDDSNSNNIDGEKVRMKLHTLSSELEQQLRQ--YSDQPCTWWRETYDVWLNSINEGENESDDNRSNEWNTFRSEGIQHLVSPLV-GCDVLWDPQWDPKKHAYLNVDEYGNDTSSSPTTINKNNNVDGCHATMEAGSA-----GAIVDSISLIPGKRILIKDELSLWEDEFWINDRGYDPDAVVDDNDGGGNDENEDGVGNMPFVYGNRRGVPYKLERVSCISTENTNEGSDDMSSAPPLLLERTIHKQELAWTLGDDFREQTEYEEKLRAV 408          
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Match: D7G1T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T2_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.270e-25
Identity = 72/195 (36.92%), Postives = 94/195 (48.21%), Query Frame = 3
Query:   30 IRQPVLFLVWLLPQTFLVTSLITRPSPARFPAEVLWRNGKNVQHSASNVEKVVGNRREEAAGKASHPEAEALVSDLLQCFQGEFDNYDQVVEDRAAGMAAGPGGGHEHIHCSLTLLDELLLPKQILRQQHGERRASKGAVEGRGGGRESRSNQETRGAELELEERLLAVVAAKYFFNGDASIVFRYRLYSFHPCP 614
            +++ VL L+ ++P   L+ S     S          R  + VQ S ++V+           G +     +A+VS+LLQ FQGEFDNYDQVV DR AGM  GPGGGHEHIHCSL  LD   +P+Q+                                              AKY+FNGD+++VFRYRLYSFH CP
Sbjct:    2 MQRVVLLLLQVVPSAGLLVSWTAARS----------RLSQKVQRSCTSVDS-----HTPGGGLSGDEPRDAMVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKRLDPAEVPEQVAXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXAKYYFNGDSNVVFRYRLYSFHACP 177          
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Match: W7TJG7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJG7_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.890e-24
Identity = 104/335 (31.04%), Postives = 140/335 (41.79%), Query Frame = 3
Query:  213 GKASHPEAEALVSDLLQCFQGEFDNYDQVVEDRAAGMAAGPGGGHEHIHCSLTLLDELLLPKQILRQQHGERRASKGAVEGRGGGRESRSNQETRGAELELEERLLAVVAAKYFFNGDASIVFRYRLYSFHPCP--------QQGAS-----RGGAMMRLWRLIPSIEKRLRATGYDLTSFQWQEEEVGNIMGEEHVGDNNAAAGEKPDLTASHEVAECMHGCEIYWS---------RSGLKNGEGGRQKSSVASTSQVEQQEGGGEERLFLGLMGEDDEGTWVASQNMQGLEILIKDDLKVWSDRLWVNDRGFD-REGKFVYGNQRGVPYKLKR 1148
            G  +  + + L+S     FQGEFDN  QV  +RA G+ AG GGGHE IHC   +L+ L L   +L                   G +S                 L  V A Y+F+G    VFR R+YSFHP P        + G+S        A MRL R  P  E  +R   YD+   Q    E  N +                      +V E + GC I WS         +  + NGEG R +    +  Q E +EG       L           V SQ    + + I+DDL + +D L VNDRG D R G+ VYGN +G+PY+++R
Sbjct:   76 GATTTEDGDGLLSHFRSFFQGEFDNAVQVASERAQGIEAGLGGGHEQIHC---VLEPLELAHGVL-------------------GNDS-----------------LFCVGATYYFDGRPDAVFRCRVYSFHPPPPSQGWEDEEDGSSFFLPPLPFAEMRLHRFTPDFETIMRKNNYDMRLLQ----EPCNQLA---------------------QVVEELTGCSILWSVCTERIVIGQDIVGNGEGERPEVVHGARFQGEMREG-----FCL-----------VDSQREANVRLKIEDDLLLTADMLSVNDRGTDCRTGELVYGNHQGLPYRMQR 330          
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Match: A0A1E7FNR9_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNR9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.250e-21
Identity = 100/385 (25.97%), Postives = 150/385 (38.96%), Query Frame = 3
Query:  213 GKASHPEAEALVSDLLQCFQGEFDNYDQVVEDRAAGMAAGPGGGHEHIHCSLTLLDELLLPKQILRQQHGERRASKGAVEGRGGGRESRSNQETRGAELELEERLLAVVAAKYFFNGDASIVFRYRLYSF------HPCPQQGASRGGAMMRLWRLIPSIEKRLRATGYDLTSFQWQEEEVGNIMGEEHVGDNNAAAGEKPDLT-ASHEVAECMHGCEIYWSRSGLKNGEGGRQKSSVASTSQVEQQEGGGEERLFLGLMGEDDEGTWVASQNM-QGLEILIKDDLKVWSDRLWVNDRGFDR-EGKFVYGNQRGVPYKLKRV--------------------------------NPGDDDDELNWTVGEQHRTPELYAEKMSAIG 1244
            G++SH   E +   L + FQG+FDNY QVVEDR  G+    GGGHEH HC+L  + E                                              RL A     +FF+G+ + +FR+R Y        +    Q ++     MRL  L P +E+ L++   D  S+     ++      E V  N++        +   ++    +  CEI WS                   S +   +G  +E   + L      G  V +  +  G++I I D L ++    ++NDRGFD   G F+YGNQR +PY+L+RV                                NP     EL WT+G ++RT E Y  K+  IG
Sbjct:   85 GESSH---EKVTKILSEWFQGDFDNYAQVVEDRKNGLLPREGGGHEHFHCTLVPVTE--------------------------------------------STRLAA-----FFFDGNPNRIFRFRYYELLTPTIINDVDHQHSNNVTVEMRLNTLHPELEQLLKSHSTDPLSWP----DIFKNFQHEGVSSNSSXXXXXXXXSDEKNQKVIPLSKCEIVWSFD-----------KDPIQHSYISSDDGKDDEAENMSLHAVMVHGEQVVNSTIVPGMQIRILDQLSLYQHVFYINDRGFDPITGAFIYGNQRDIPYRLERVSNILPSATSAADXXXXXXSTADRRERLQLEVINP-----ELEWTIGPKYRTIEEYDSKLKVIG 397          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10608.396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9Q8_9PHAE6.480e-10444.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1T3_ECTSI7.870e-4667.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5J4Z4Z5_PORPP6.400e-3429.67Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
K0TER5_THAOC4.390e-3129.28Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4N064_9STRA6.220e-2728.46Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
B7G7Q1_PHATC1.090e-2629.48Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2PZJ6_9STRA8.160e-2627.48Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
D7G1T2_ECTSI1.270e-2536.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TJG7_9STRA2.890e-2431.04Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A1E7FNR9_9STRA1.250e-2125.97Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10608contigH-paniculata_contig10608:705..4620 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score169.9
Seed ortholog evalue2.6e-39
Seed eggNOG ortholog2880.D7G1T3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.CpeT/CpcT family (DUF1001)
EggNOG OGs2CBDP@1,2SAUK@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-07_004240.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1747
Cds size1257
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10608.396.1prot_H-paniculata_contig10608.396.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10608 1175..4600 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928765.3184006-UTR-H-paniculata_contig10608:704..11741622928765.3184006-UTR-H-paniculata_contig10608:704..1174Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10608 705..1174 -
1691480610.7473829-UTR-H-paniculata_contig10608:704..11741691480610.7473829-UTR-H-paniculata_contig10608:704..1174Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10608 705..1174 -
1622928765.4047122-UTR-H-paniculata_contig10608:4600..46201622928765.4047122-UTR-H-paniculata_contig10608:4600..4620Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10608 4601..4620 -
1691480610.7862315-UTR-H-paniculata_contig10608:4600..46201691480610.7862315-UTR-H-paniculata_contig10608:4600..4620Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10608 4601..4620 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928765.3353934-CDS-H-paniculata_contig10608:1174..18371622928765.3353934-CDS-H-paniculata_contig10608:1174..1837Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10608 1175..1837 -
1691480610.7571006-CDS-H-paniculata_contig10608:1174..18371691480610.7571006-CDS-H-paniculata_contig10608:1174..1837Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10608 1175..1837 -
1622928765.3498225-CDS-H-paniculata_contig10608:2359..26771622928765.3498225-CDS-H-paniculata_contig10608:2359..2677Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10608 2360..2677 -
1691480610.7643628-CDS-H-paniculata_contig10608:2359..26771691480610.7643628-CDS-H-paniculata_contig10608:2359..2677Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10608 2360..2677 -
1622928765.3751023-CDS-H-paniculata_contig10608:3639..38101622928765.3751023-CDS-H-paniculata_contig10608:3639..3810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10608 3640..3810 -
1691480610.7717233-CDS-H-paniculata_contig10608:3639..38101691480610.7717233-CDS-H-paniculata_contig10608:3639..3810Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10608 3640..3810 -
1622928765.3927975-CDS-H-paniculata_contig10608:4495..46001622928765.3927975-CDS-H-paniculata_contig10608:4495..4600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10608 4496..4600 -
1691480610.778973-CDS-H-paniculata_contig10608:4495..46001691480610.778973-CDS-H-paniculata_contig10608:4495..4600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10608 4496..4600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10608.396.1

>prot_H-paniculata_contig10608.396.1 ID=prot_H-paniculata_contig10608.396.1|Name=mRNA_H-paniculata_contig10608.396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=419bp
MLAIRQPVLFLVWLLPQTFLVTSLITRPSPARFPAEVLWRNGKNVQHSAS
NVEKVVGNRREEAAGKASHPEAEALVSDLLQCFQGEFDNYDQVVEDRAAG
MAAGPGGGHEHIHCSLTLLDELLLPKQILRQQHGERRASKGAVEGRGGGR
ESRSNQETRGAELELEERLLAVVAAKYFFNGDASIVFRYRLYSFHPCPQQ
GASRGGAMMRLWRLIPSIEKRLRATGYDLTSFQWQEEEVGNIMGEEHVGD
NNAAAGEKPDLTASHEVAECMHGCEIYWSRSGLKNGEGGRQKSSVASTSQ
VEQQEGGGEERLFLGLMGEDDEGTWVASQNMQGLEILIKDDLKVWSDRLW
VNDRGFDREGKFVYGNQRGVPYKLKRVNPGDDDDELNWTVGEQHRTPELY
AEKMSAIGIVPGQRSGPP*
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mRNA from alignment at H-paniculata_contig10608:705..4620-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10608.396.1 ID=mRNA_H-paniculata_contig10608.396.1|Name=mRNA_H-paniculata_contig10608.396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3916bp|location=Sequence derived from alignment at H-paniculata_contig10608:705..4620- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCTCGCACTGAGGTAACCCAATGCTCGCTATCAGGCAGCCGGTGTTATTC CTTGTATGGCTCCTACCGCAGACCTTTCTGGTGACGTCGTTGATTACCAG GCCAAGCCCTGCCCGCTTTCCTGCAGTGAGTGAATATCAGCTACAGTATT GTATTGTAGGTGAATACCGCCCTGATGAGTTAAGCCAACCTTCGTATTTG AGATGACAGCCAAATACAGAGGGAGACATAATCCTATCCAAATAAGTCCG CAGAGCCCCGTCGCACTTGGCGAACAAATGGTCCTGTCGCGAAAGTTGGT GTCATTCATACCTCTGCTATCTAGGTTTTCCAAGCAAATACATCATGTGC ACGATCATACTGAGAGTGCAGACGGTACTCCTACATACAAGTCCTCATAT ACAGGTAAATACCATGTACATGTTTGACTCAGACGTGTCTCTTGGGGCGA TACCAACAGCTTGAATGTTTGTAGACTGCTCGTGATTGAAGACTACACGT TGTCGGTGTACATACGTGCTTACAGCGCACATAGCATGGACAACGTTCGA CATTTGATTGCGCGCTTGGGTTTTCAAGTCATATCTTTTCCCCGTTGCCA TCTACTGCACAATTTCACTGTATTCCTGTCAGCCCGACACTCTGGTGGTA CGGCTTAAGAAACGAACGCGCGAACATTTAAACAAGTGTATCCATTCACG CTGCCTGTCGGAGATGCTTCGAGGTCTGCCGTTACGTATTGCATCAAGCT TCAGTGAAGCTATATATTTTGTCGTTTCTTGACTGACGCTACGCGTATCG CTTTCACCAGGAGGTATTGTGGAGAAATGGGAAAAATGTACAACATTCGG CGTCAAATGTCGAGAAAGTGGTGGGTAACCGACGCGAAGAAGCAGCAGGG AAAGCGTCGCACCCGGAAGCGGAGGCGTTAGTTTCTGATTTGTTGCAGTG CTTTCAAGGGGAGTTCGACAATTATGATCAGGTTGGCGATAAAACTATTT CGTGTGTTTACTGCGTCTTTCCGTTTGATCGACCAATTCAAACAGTGTTT TTCAGATATCGACCAAGTCGACGCGCACTGGGTCAAATTAGAAAGGACAT TTAGTTCAGGTGTTGTAATACATAGATCAGAACTGCTTAACCTGTGAAAA AATGATAGTTCATGTTGGAGCACACCGGCCGGCGACCGACACTGTCTCAC GCAAGGTACACGTGATGTTGGGTTCAAACAAGCATTTATAGGTAATATCA AGTGTTTTTCATGTATACGGGCGGCCCGAGTTAGTGCGTGTGTGTATACA AGGTTGATGCTAGTTTAATCTTCCGTTCGTCCTGATATCCACTAGGACTC TGAGTTGCAGCTCTATAAAATACAGTATTATGCCAGCTGTACCTGGAAAC TTGGATTTTTGTCAGATACATGCTGTGGCGCACTCATAATTCGCCAAAGA GAGAGCTTCAGTTAGCGACATGTCGGTTTTTCAGCACACCGAGTTGAGGC TGGTGCAATAGTTGAGATACTGTGACTCGCCTACACAGGCTCTGCGCCCT GTGGAATCATGAAACCTGATATATTTGACGAAATGAACAGGCAACATAGA CACGTGATTGCGACACTCGTGAGCAACCGCTGCCAGTCTAGTCGGCGTAC TATGATTCACGAGTCACGGGAAGTTGGCAATATTAGTATTATTGATTTTA CGCTGAATACACGACCACGTACCGCAACGCCTTTGTACTTTATCCTACGT ATCAACAATGCAAGGATTATCGCCTTTAAAAGCTTTGAATGATCTGCCGA GCTACAACCCTGCCGAAGGTAACTTGGACTTCTTCATGGGTAAAACATTA CGTCAGCTCTTTTTCACGCTGTTGTTGCTTTCTCGCTCATTGATGCGTAT AATGTCGCTAGCTGAAAAACAATCGACCTGATTGGCGTCCTAGGTGGTGG AAGATCGCGCGGCAGGGATGGCCGCAGGCCCCGGCGGCGGTCATGAACAC ATCCACTGCAGTCTTACGCTGCTGGACGAACTTCTGCTGCCAAAACAAAT ATTGAGACAGCAGCACGGAGAGCGACGTGCATCGAAAGGTGCTGTAGAAG GAAGAGGGGGTGGAAGAGAGAGCAGAAGCAACCAGGAGACACGAGGCGCC GAACTCGAGCTCGAGGAACGGCTGCTGGCGGTTGTAGCGGCCAAATACTT CTTCAATGGAGACGCGTCGATTGTTTTCCGATATCGACTGTACAGTTTCC ATCCCTGTCCGGTCAGTTCGAGTCAGGATGAGCGGGGGATTGGCGAAGGA GGGGAGGAGGTGCAGGGTTGGGGAGGGTCTGACGCCACAGTGTATATTGA CAACAAGATATAGAACGTTGAAGTCGGTAAGGTTTATGGCGCAAGTGACG TATCGAGACAATTTCCTAAAACGTATTACTTGATTTTCTGGTGGTACAGT AATGTGTCTGTGCGAGAGGCGAGATGGAATTGGAATCGAGAGGGAAAACG ACAAGTGGTTTCCTAGCATCCGCCCACCTTGTGGTATGCCTTGACAGCAT CTTCTGCGCCCATCAGCGTGTTTAGTTGCAAGCCCGATGTACCTAGTGAA ACATAGCGCTTGACATCACTCCAGCATGGCCGCCGACCCACCTTTCGTGG ATGAAAAAATGTTTCCAGTCATGTTCTCGTCCCAACATTCAGTAGTACAA TAGTACCGGATACTGTTCGTGTCTCTTGTAACCCTTTAGCTATATTGATG GCCGCCTGCTGTTGTTCCTAATACATGCACCAGCAACAAGGAGCGAGCAG AGGGGGCGCCATGATGAGACTATGGCGTTTGATCCCCTCCATCGAGAAAC GCCTCCGCGCCACAGGCTACGACCTGACCAGTTTTCAGTGGCAAGAGGAG GAGGTAGGGAATATCATGGGAGAGGAACACGTGGGAGATAATAATGCTGC CGCTGGGGAAAAGCCGGACCTTACTGCTAGCCACGAGGTAGCGGAATGCA TGCATGGCTGCGAGATATACTGGAGCCGAAGCGGGCTGAAGAATGGCGAG GGAGGACGACAGAAATCATCGGTAGCCAGCACGTCGCAAGTCGAGCAGCA GGAGGGAGGGGGTGAGGAACGTCTTTTCTTGGGCTTGATGGGTGAAGACG ATGAGGGCACGTGGGTGGCCTCCCAAAATATGCAAGGGCTGGAGATCTTG ATCAAGGACGATTTGAAGGTTTGGTCGGATCGACTCTGGGTGAACGACCG CGGGTTCGACCGGGAGGGGAAGTTTGTGTACGGGAATCAGCGCGGCGTTC CCTACAAGCTCAAGCGGGTAAACCCTGGTGACGACGACGATGAATTGAAC TGGACCGTTGGGGAGCAACACAGGACGCCCGAGCTGTACGCCGAGAAAAT GTCTGCTATTGGCATAGTCCCCGGACAGAGGTCTGGACCTCCTTAAGCTG CTACTGCTGCTGTGTCTGCGAAAGGGAATGGACAGTGATGGGCGTGTAGA GAAAGTTGAACGTTTGACGAAGACGGTGGCTGGATCAGATCGCACTGCCC CCCCTCCCTTTTAGTGTTAGACTTTCTCTTGCTGTACGTTTTTCTTTCAT TCTCTGCACTTGTTTTTCCTCCTCTTCTTGTGGAGTGTGTGTACGTTTTA TTTTTGTTGCAACGTTTTTTTTTTGTTCATTTTACCCTTGGTTTCTCTTC TCTTTTTTTCACCTCTAGATCCCCGCCTCTGGCCCTCCGAGTTTACGTGC GTTGTCCGGAACCTTTGTCTCTCTCTCTCTCTCTCTGCTTCGCTCTGTCT TGTGTGAGATGCTGCGGCACCGGGTGTGGTTGATGCTTTTCGCCGCTCTA GCCGTTTGTACGATGAATGAATACTCCCCCTCTTTTTTTGTCAGAAATTT GTAAAAAAACCGGGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig10608:705..4620-

>mRNA_H-paniculata_contig10608.396.1 ID=mRNA_H-paniculata_contig10608.396.1|Name=mRNA_H-paniculata_contig10608.396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2514bp|location=Sequence derived from alignment at H-paniculata_contig10608:705..4620- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCGCTATCAGGCAGCCGGTGTTATTCCTTGTATGGCTCCTACCGCA
GACCTTTCTGGTGACGTCGTTGATTACCAGGCCAAGCCCTGCCCGCTTTC
CTGCAATGCTCGCTATCAGGCAGCCGGTGTTATTCCTTGTATGGCTCCTA
CCGCAGACCTTTCTGGTGACGTCGTTGATTACCAGGCCAAGCCCTGCCCG
CTTTCCTGCAGAGGTATTGTGGAGAAATGGGAAAAATGTACAACATTCGG
CGTCAAATGTCGAGAAAGTGGTGGGTAACCGACGCGAAGAAGCAGCAGGG
AAAGCGTCGCACCCGGAAGCGGAGGCGTTAGTTTCTGATTTGTTGCAGTG
CTTTCAAGGGGAGTTCGACAATTATGATCAGGAGGTATTGTGGAGAAATG
GGAAAAATGTACAACATTCGGCGTCAAATGTCGAGAAAGTGGTGGGTAAC
CGACGCGAAGAAGCAGCAGGGAAAGCGTCGCACCCGGAAGCGGAGGCGTT
AGTTTCTGATTTGTTGCAGTGCTTTCAAGGGGAGTTCGACAATTATGATC
AGGTGGTGGAAGATCGCGCGGCAGGGATGGCCGCAGGCCCCGGCGGCGGT
CATGAACACATCCACTGCAGTCTTACGCTGCTGGACGAACTTCTGCTGCC
AAAACAAATATTGAGACAGCAGCACGGAGAGCGACGTGCATCGAAAGGTG
CTGTAGAAGGAAGAGGGGGTGGAAGAGAGAGCAGAAGCAACCAGGAGACA
CGAGGCGCCGAACTCGAGCTCGAGGAACGGCTGCTGGCGGTTGTAGCGGC
CAAATACTTCTTCAATGGAGACGCGTCGATTGTTTTCCGATATCGACTGT
ACAGTTTCCATCCCTGTCCGGTGGTGGAAGATCGCGCGGCAGGGATGGCC
GCAGGCCCCGGCGGCGGTCATGAACACATCCACTGCAGTCTTACGCTGCT
GGACGAACTTCTGCTGCCAAAACAAATATTGAGACAGCAGCACGGAGAGC
GACGTGCATCGAAAGGTGCTGTAGAAGGAAGAGGGGGTGGAAGAGAGAGC
AGAAGCAACCAGGAGACACGAGGCGCCGAACTCGAGCTCGAGGAACGGCT
GCTGGCGGTTGTAGCGGCCAAATACTTCTTCAATGGAGACGCGTCGATTG
TTTTCCGATATCGACTGTACAGTTTCCATCCCTGTCCGCAACAAGGAGCG
AGCAGAGGGGGCGCCATGATGAGACTATGGCGTTTGATCCCCTCCATCGA
GAAACGCCTCCGCGCCACAGGCTACGACCTGACCAGTTTTCAGTGGCAAG
AGGAGGAGGTAGGGAATATCATGGGAGAGGAACACGTGGGAGATAATAAT
GCTGCCGCTGGGGAAAAGCCGGACCTTACTGCTAGCCACGAGGTAGCGGA
ATGCATGCATGGCTGCGAGATATACTGGAGCCGAAGCGGGCTGAAGAATG
GCGAGGGAGGACGACAGAAATCATCGGTAGCCAGCACGTCGCAAGTCGAG
CAGCAGGAGGGAGGGGGTGAGGAACGTCTTTTCTTGGGCTTGATGGGTGA
AGACGATGAGGGCACGTGGGTGGCCTCCCAAAATATGCAAGGGCTGGAGA
TCTTGATCAAGGACGATTTGAAGGTTTGGTCGGATCGACTCTGGGTGAAC
GACCGCGGGTTCGACCGGGAGGGGAAGTTTGTGTACGGGAATCAGCGCGG
CGTTCCCTACAAGCTCAAGCGGGTAAACCCTGGTGACGACGACGATGAAT
TGAACTGGACCGTTGGGGAGCAACACAGGACGCCCGAGCTGTACGCCGAG
AAAATGTCTGCTATTGGCATAGTCCCCGGACAGAGGTCTGGACCTCCTTA
ACAACAAGGAGCGAGCAGAGGGGGCGCCATGATGAGACTATGGCGTTTGA
TCCCCTCCATCGAGAAACGCCTCCGCGCCACAGGCTACGACCTGACCAGT
TTTCAGTGGCAAGAGGAGGAGGTAGGGAATATCATGGGAGAGGAACACGT
GGGAGATAATAATGCTGCCGCTGGGGAAAAGCCGGACCTTACTGCTAGCC
ACGAGGTAGCGGAATGCATGCATGGCTGCGAGATATACTGGAGCCGAAGC
GGGCTGAAGAATGGCGAGGGAGGACGACAGAAATCATCGGTAGCCAGCAC
GTCGCAAGTCGAGCAGCAGGAGGGAGGGGGTGAGGAACGTCTTTTCTTGG
GCTTGATGGGTGAAGACGATGAGGGCACGTGGGTGGCCTCCCAAAATATG
CAAGGGCTGGAGATCTTGATCAAGGACGATTTGAAGGTTTGGTCGGATCG
ACTCTGGGTGAACGACCGCGGGTTCGACCGGGAGGGGAAGTTTGTGTACG
GGAATCAGCGCGGCGTTCCCTACAAGCTCAAGCGGGTAAACCCTGGTGAC
GACGACGATGAATTGAACTGGACCGTTGGGGAGCAACACAGGACGCCCGA
GCTGTACGCCGAGAAAATGTCTGCTATTGGCATAGTCCCCGGACAGAGGT
CTGGACCTCCTTAA
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