prot_H-paniculata_contig17086.3959.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig17086.3959.1
Unique Name	prot_H-paniculata_contig17086.3959.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	271

Homology

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BLAST of mRNA_H-paniculata_contig17086.3959.1 vs. uniprot
Match: A0A6H5KGB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB1_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 1.980e-84
Identity = 154/270 (57.04%), Postives = 205/270 (75.93%), Query Frame = 0

Query:    1 AKEAVGVELEAAMKNIEEAREEFVKKEQDFQIQLDRFMEYPKVAEAMAEKLDKCLKSSRREHNLLELERKDFRRQLQIFVRWETENSVLRKKIKLQNIQALVLRRQLAKAEATSAGSCATRKAVLGGAVEKLQKAAVAAKHQANKYRELAGSRSVRVMELEAEIKALKASVQRMRDLQEVQANDAYEMEIGRLARVSPNMVDFQDKSGLGKDDMQASLAQLKVLREKENHKDALIKLVKERNDFELRIKDLQARNSWLETQVLGSSSAFR 270
            AK  +  EL+A     +E  +    KE++FQ QLDRFMEYPK AE MAE+L++C K++RRE NL+ LERK+FRRQL +F +W+TENS LR+K + Q +Q + LRRQLA  E+  AGS +TRKAV+GG V++LQ+A  AAKHQA+KYRELAG+R V+  +L+AEI +LKA+++ +R   E  A+D+YE EI RLARV+P ++D Q KSGL K+DM+AS+ QLK+LREKE  KDALI L +ER++F L IKDL+ARNSWLE Q+L +  A R
Sbjct:   23 AKSILTQELQATAARNKELCQTAKDKEKEFQAQLDRFMEYPKAAERMAEELERCKKTARREKNLMVLERKEFRRQLHMFQKWQTENSNLREKARAQEMQVVALRRQLAVTESGLAGSASTRKAVIGGTVDRLQRAETAAKHQAHKYRELAGARGVQAAQLKAEISSLKATIKTLRLKLEPPAHDSYETEIARLARVNPEVLDIQQKSGLSKEDMEASMVQLKLLREKEEQKDALIALARERDEFALCIKDLRARNSWLEKQMLKTPDALR 292

[Close]

BLAST of mRNA_H-paniculata_contig17086.3959.1 vs. uniprot
Match: D8LEA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA2_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 8.080e-82
Identity = 144/240 (60.00%), Postives = 189/240 (78.75%), Query Frame = 0

Query:   31 QIQLDRFMEYPKVAEAMAEKLDKCLKSSRREHNLLELERKDFRRQLQIFVRWETENSVLRKKIKLQNIQALVLRRQLAKAEATSAGSCATRKAVLGGAVEKLQKAAVAAKHQANKYRELAGSRSVRVMELEAEIKALKASVQRMRDLQEVQANDAYEMEIGRLARVSPNMVDFQDKSGLGKDDMQASLAQLKVLREKENHKDALIKLVKERNDFELRIKDLQARNSWLETQVLGSSSAFR 270
            Q QLDRFMEYPK AE MAE+L++C K++RRE NL+ LERK+FRRQL +F +W+TENS LR+K + Q +Q + LRRQLA  E+  AGS +TRKAV+GG V++LQ+A  AAKHQ +KYRELAG+R V+  +++ EI +LKA+++ +R   E  A+D+YE EI RLARV+P ++D Q KSGL K+DM+AS+AQLK+LREKE  KDALI L +ER++F L IKDL+ARNSWLE QVL +  A R
Sbjct:   88 QAQLDRFMEYPKAAERMAEELERCKKTARREKNLMVLERKEFRRQLHMFQKWQTENSNLREKARAQEMQVVALRRQLAVTESGLAGSASTRKAVIGGTVDRLQRAETAAKHQVHKYRELAGARGVQAAQMKTEISSLKATIKTLRLKLEPPAHDSYETEIARLARVNPEVLDIQQKSGLSKEDMEASMAQLKLLREKEEQKDALIALARERDEFALCIKDLRARNSWLEKQVLKTPDALR 327

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig17086.3959.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig17086.3959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KGB1_9PHAE	1.980e-84	57.04	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LEA2_ECTSI	8.080e-82	60.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..29
None	No IPR available	COILS	Coil	Coil	coord: 129..149
None	No IPR available	COILS	Coil	Coil	coord: 55..75
None	No IPR available	COILS	Coil	Coil	coord: 157..177
None	No IPR available	COILS	Coil	Coil	coord: 234..261

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig17086	contig	H-paniculata_contig17086:98..3576 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig17086.3959.1	mRNA_H-paniculata_contig17086.3959.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig17086 98..3576 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig17086.3959.1 ID=prot_H-paniculata_contig17086.3959.1|Name=mRNA_H-paniculata_contig17086.3959.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bp
AKEAVGVELEAAMKNIEEAREEFVKKEQDFQIQLDRFMEYPKVAEAMAEK
LDKCLKSSRREHNLLELERKDFRRQLQIFVRWETENSVLRKKIKLQNIQA
LVLRRQLAKAEATSAGSCATRKAVLGGAVEKLQKAAVAAKHQANKYRELA
GSRSVRVMELEAEIKALKASVQRMRDLQEVQANDAYEMEIGRLARVSPNM
VDFQDKSGLGKDDMQASLAQLKVLREKENHKDALIKLVKERNDFELRIKD
LQARNSWLETQVLGSSSAFR*