mRNA_H-paniculata_contig1708.3957.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE) HSP 1 Score: 693 bits (1789), Expect = 7.300e-218 Identity = 390/698 (55.87%), Postives = 470/698 (67.34%), Query Frame = 1
Query: 358 TLERSCDALPRLLSDGYTKFMETVVMLFDPSRTIYMPMKTMWSTSPGSPEQRTKLCNQFLVNGGFEVVAKFLESQAKDLKRKANQRVADKADAQKKLTEATAAMNEFRATQEQMVSLAAQGKTGPELQNARDIVAIAAEKARAAKVASDQATAKASAVPHGSAPTGPWMGAAGLAIVIGAVADARPDHQMLTRHGAIVVKTCTAVMAQVD-------------VLTEDELKKENQDSLSTLVRHLTHLM-------VPL-GEQQMRDVFTFNANLVLRHLRSSSLPMRLWGWEQTEELIALSHRHRWNAKAYRVEGAGTACCNGIYRMAPDVAENVPRSAYHSARMRAVGAHGISSVDEDDVPKYTFQAQ--GGPLLTLFRCRMRTKACWWFISEADPTSPGTDKDVDYYQHKSTSMENYMPQRTGWESASDNKPNPKGLAPPPTVTPC--EGVLCPPGQERNCMEWDLVNWVIDNKVVEEIFGDSIHREVVGRSTKLLRFLSSMEGALTTAHLDLIWMSCVGKAEPELQAGVYQLLNSLVECMKPELVVHLIGRLQESADGARKGEGRHEVLAFVEVLAVSGGQVILTRNPAVCAAALELLWSLMREPSVVRHKACDSVNNFFAELLRPS---APGTGPRGEASR---HQNKFLGQCIDFLREKAKCTPPEGALSEAEEAAVSRSLELVRFLLEAFH 2358
TLE L LL DG +F+ET+V+L D ++ +Y K MW+ PG+PEQRTK+C + NG F A LE QA L+ +A +R KA A + A A E R + S A G GP + A +VA A ARAA A++ A A+A A+ +A W+GA L++V+ A+ + + G VL+E+ELKKE+Q++L LVR++ H+M VP GEQ+MR+ F++ LVLRHLR+SSLPMRLWGWEQTE+LI SHRHRW+AKAY VEGAGT CCNG+YR++P+ N P A + E+D PKYT+Q + G PL+TLFRC+MRTKA WWFISEADPTSPGTDKDVDYYQHKS + N+MP RTGWE+ASD K KG+ PPPTVTP EG LCPPG+E N +EW+L W+++NKVVEEIFGDSIHREVVGRS KLL+FLSSME ALTT HLDLIW SCVGKAEPELQA VYQLL +LVECMKPELVVHLIGRLQESADGA K GR EVLAFVE LA + G +ILTRN AV AA ELLWSL+REPSV RHK+C++V +FFA++L+ S G GP G H +KFLGQCIDFLREKA+C PP G LSEAEEAAVSRSLELVRFLLE F+
Sbjct: 12 TLEACARVLSPLLKDGRMEFLETLVLLVDATKILYNGQKAMWTHFPGAPEQRTKVCMIMMDNGTFGAAADLLEQQAARLESQARRREGVKATAAETARRAQLAQAEARQAAQNASSPAEGGGGGPADKEA--VVARAVWVARAAVEAAEVAAAEARAL--AAAKGEQWLGAESLSVVLAALLECKLGKDSPVGGGXXXXXXXXXXXXXXXXXXXXXXAGRRRRVLSEEELKKESQEALGHLVRNIRHVMMFQTSPGVPYAGEQEMRENVRFHSELVLRHLRASSLPMRLWGWEQTEDLINHSHRHRWHAKAYLVEGAGTKCCNGVYRVSPEYTANAPTKAGPTPA-------------EEDAPKYTYQGKEPGDPLMTLFRCKMRTKAHWWFISEADPTSPGTDKDVDYYQHKSNNQNNFMPWRTGWEAASDTKLLVKGMNPPPTVTPVPSEGYLCPPGEELNTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLLQFLSSMEDALTTEHLDLIWSSCVGKAEPELQAVVYQLLTTLVECMKPELVVHLIGRLQESADGAGKTGGRSEVLAFVECLAANQGHIILTRNKAVKAATTELLWSLLREPSVTRHKSCEAVTSFFAQMLQISPTLTAGVGPEGGGPARYLHHHKFLGQCIDFLREKAECVPPSGVLSEAEEAAVSRSLELVRFLLENFN 692
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Match: D7G2G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G5_ECTSI) HSP 1 Score: 250 bits (639), Expect = 8.740e-70 Identity = 195/579 (33.68%), Postives = 254/579 (43.87%), Query Frame = 1
Query: 97 MDQPRPPMISRQDMQV-FEVFEVVRKGLAETSTVGWDNAHVSIKLATDVYRSPVGKGFLLDYLTQITGIMLDQHASKFAKFEIGCAKRTLERSCDALPRLLSDGYTKFMETVVMLFDPSRTIYMPMKTMWSTSPGSPEQRTKLCNQFLVNGGFEVVAKFLESQAKDLKRKANQRVADKADAQKKLTEATAAMNEFRATQEQMVSLAAQGKTGPELQNARDIVAIAAEKARAAKVASDQATAKASAVPHGSAPTGPWMGAAGLAIVIGAVADARPDHQMLTRHGA----------------------------IVVKTCTAVMAQVDVLTEDELKKENQDSLSTLVRHLTHLM-------VPL-GEQQMRDVFTFNANLVLRHLRSSSLPMRLWGWEQTEELIALSHRHRWNAKAYRVEGAGTACCNGIYRMAPDVAENVPRSAYHSARMRAVGAHGISSVDEDDVPKYTFQAQGGPLLTLFRCRMRTKACWWFISEADPTSPGTDKDVDYYQHKSTSMENYMPQRTGWESASDNKPNPKGLAPPPTVTPC--EGVLCPPGQERNCMEWDLVNWVIDNKV 1716
+D+ RP + R + V F+ VR+GLA+ +TVGW A SI+LAT +Y P GFL D+L Q+TGIMLDQ QR K+C + NG F A LE QA L +A +R KA A + A A E R + S A G GP + A +VA A ARAA +A A+ +A W+GA L++V+ A+ + + G + + C A+M QV VL+E+ELKKE+Q++L LVR++ H+M VP GE++MR+ F++ LVLRHLR+SSLPMRLWGWEQTE+LI SHRHRWNAK Y ADPTSPGTDKDVDYYQHKS + N+MP RTGWE+ASD K KG+ PPPTVTP EG LCPP +E N +EW+L W+++NK+
Sbjct: 12 LDRRRPAVQRRVEPPVDLTPFDSVRQGLADNNTVGWSLAPTSIELATKIYPHPRAIGFLSDFLHQVTGIMLDQ-----------------------------------------------------------------QRAKVCTIMMDNGTFGAAADLLEQQAARLDSQARRREGVKAAAAETARRAQLAQAEARQAAQNAPSPAEGGGGGPADKEA--VVARAVGAARAAXXXXXXXXXEARAL--AAAKGEQWLGAESLSVVLAALLECKLGTDAPVGGGGLPAVAQPGGGXXXXXXXXXSGSISPALRVAQRACRAIMKQVRVLSEEELKKESQEALGHLVRNIRHVMMFQTSPGVPYAGEKEMRENVRFHSELVLRHLRASSLPMRLWGWEQTEDLINHSHRHRWNAKVYL--------------------------------------------------------------------------------ADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLLVKGVNPPPTVTPVPSEGYLCPPREEYNTLEWELARWIVENKL 441
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Match: A0A7R9VSJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VSJ1_9STRA) HSP 1 Score: 240 bits (612), Expect = 3.230e-64 Identity = 160/509 (31.43%), Postives = 244/509 (47.94%), Query Frame = 1
Query: 952 VKTCTAVMAQVDVLTEDELKKENQDSLSTLVRHLTHLMVPLGEQQMRDVFTFNA---NLVLRHLRSSSLPMRLWGWEQTEELIALSHRHRWNAKAYRVEGAGTACCNGIYRMAPDVAENVPRSAYHSARMRAVGAHGISSVDEDDVPKYTFQAQGG-PLLTLFRCRMRTKACWWFISEADPTSPGTDKDVDYYQHKSTSMENYMPQRTGWESASDNKPNPKGLAPPPTVTPCEGVLCPPGQERNCMEWDLVNWVIDNKVVEEIFGDSIHREVVGRSTKLLRFLSSM-------EG---------------ALTTAHLDLIWMSCVGKAEPELQAGVYQLLNSLVECMKPELVVHLIGRLQES-ADGARKGEGRHEVLAFVEVLAV-----SGGQVILTRNPAVCAAALELLWSLMREPSVVRHKACDSVNNFFAELLRPSAPGTGPRGEASRHQNKFLGQCIDFLREKAKCTPPEGALSEAEEAAVSRSLELVRFLLEAFHPEQVGEVV 2382
++ AVM TE+ LK++ D L+ + L + L + +++++F +VL+ + S SLP++L+GWEQ +I S R + + V G G NG Y D A V Y G + + +P+ + +GG LTLFRC MR++ WWF+SEAD PGTDKDVDYYQHKS E P +GW + G+ PPPT+ G++ P G+E N +E L W ++N ++E + GDS+HRE+V RS +L+ FL+SM EG L +HL L W +C KA+ + VY+LL ++ + +L + L+ +Q+S AD + K + EV F LAV S ++ + V + LELLW ++ K + + + LR GT H+ KFL C L+ A+ T G+ +E R ++L RF+L+A EQ +V
Sbjct: 108 IRIARAVMDTTGNATEEALKRQTHDGLNQTLTDLHVIFNRLASSRRKELYSFFRFWRGMVLKLITSQSLPLKLFGWEQMNAVIYESRAMRPPPRTFIVSGGGCGFVNGRY----DYAGAVTEEGYSKP--------GQETSYQLQIPESVSENEGGGKKLTLFRCTMRSQQKWWFLSEADEEQPGTDKDVDYYQHKSNKKEEATPPLSGWVTCRS-----AGVEPPPTLE-SSGIVVPRGEEYNTLEHQLAKWALENNLIELVLGDSVHREIVARSKELIEFLASMCALDKPLEGDATESVEVGMVANRYCLKPSHLLLAWKTCTSKADAAVSTEVYKLLVEILPSLPNDLAITLLKEIQKSLADRSEKRDYLFEVAEFCSALAVEKNKNSNDAMLPVISDEVRSEILELLWDVLTHQDASSLKNYEQLKEYVTHELRVEPMGTA-------HREKFLRSCCLALKAHAELTGSSGSGESVDEVLALRMVQLTRFVLQACPREQAAMLV 591
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Match: A0A7S2XLE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLE7_9STRA) HSP 1 Score: 245 bits (626), Expect = 1.160e-63 Identity = 161/499 (32.26%), Postives = 239/499 (47.90%), Query Frame = 1
Query: 949 VVKTCTAVMAQVDVLTEDELKKENQDSLSTLVRHLTHL---MVPLGEQQMRDVFTFNANLVLRHLRSSSLPMRLWGWEQTEELIALSHRHRWNAKAYRVEGAGTACCNGIYRMAPDVAENVPRSAYHSARMRAVGAHGISSVDEDDVPKYTFQAQGGPLLTLFRCRMRTKACWWFISEADPTSPGTDKDVDYYQHKSTSMENYMPQRTGWESASDNKPNPKGLAPPPTVTPCEGVLCPPGQERNCMEWDLVNWVIDNKVVEEIFGDSIHREVVGRSTKLLRFLSSM--------------EGALTTAHLDLIWMSCVGKAEPELQAGVYQLLNSLVECMKPELVVHLIGRLQESA-DGARKGEGRHEVLAFVEVLAVSGGQVILTRNP-------------AVCAAALELLWSLMREPSVVRHKACDSVNNFFAELLRPSAPGTGPRGEASRHQNKFLGQCIDFLREKAKCTPPEGALSEAEEAAVSRSLELVRFLLEA 2352
+++ C +VM + +ED LKK + DSLS + L + +VP + D + F +L L+ + S SLP+RL+GW+Q ELI R +A+ GAG NG Y S + G+ + + + ++ LTLFRC MR++ WWF+SEAD PGTDKD+DYYQHKS E P GW + ++ G+ PPPT+ G++ P G+E N +E L W IDN ++E + GDS+HREVV RST L+RFL+SM L +HL L W +C KA+ + A VYQLL S++ + +L L+ +Q+S D K + EV F LA + + R+ A+ A L+LLW+++ P K D + ++ +R GT ++ FL C L AK T G + +E R ++L +F+LEA
Sbjct: 242 ILRLCKSVMRFLGNTSEDALKKLSHDSLSGVRSDLQRIFDRLVPTRRKDTHDFYAFWRSLTLKFITSQSLPLRLFGWDQVGELIGACGEMRPPPRAFMASGAGCTFVNGQYNFTG------------STTVDGYARRGVE-ISYERIVTNPEKSGASKKLTLFRCTMRSQQKWWFLSEADEEQPGTDKDIDYYQHKSKQHEEAEPPANGWVTCRNS-----GIEPPPTLRGI-GLVVPTGEEFNTLEHQLAKWAIDNGIIELVLGDSVHREVVARSTPLIRFLASMCDNGETVDTALHRNTYCLQASHLQLAWKTCTSKADAAVSAEVYQLLVSILPSLPKDLATPLLTAIQKSLKDSTMKHDYLFEVAEFCSALATTNRPDVDVRSSTAKTGNRLPLLPDAIRAEILKLLWAVLTHPEASTLKVYDQLKSYVTFEVRVEPMGT-------LYRKDFLDSCKQALLSNAKRTTTTGE-EKIDEVLALRMVKLTKFVLEA 713
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Match: A0A7S2ES67_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ES67_9STRA) HSP 1 Score: 236 bits (603), Expect = 3.600e-61 Identity = 175/546 (32.05%), Postives = 254/546 (46.52%), Query Frame = 1
Query: 883 IVIGAVADARPDHQMLTRHGAIV-------VKTCTAVMAQVDVLTEDELKKENQDSLSTLVRHLTHLMVPLGEQQMRDVFTFNA---NLVLRHLRSSSLPMRLWGWEQTEELIALSHRHRWNAKAYRVEGAGTACCNGIYRMAPDVAENVPRSAYHSARMRAVGAHGISSVDEDDVPKYTFQAQGGPLLTLFRCRMRTKACWWFISEADPTSPGTDKDVDYYQHKSTSM-ENYMPQRTGWESASDNKPNPKGLAPPPTVTPCEGVLCPPGQERNCMEWDLVNWVIDNKVVEEIFGDSIHREVVGRSTKLLRFLSSM---------------------EGALTTAHLDLIWMSCVGKAEPELQAGVYQLLNSLVECMKPELVVHLIGRLQESADG-ARKGEGRHEVLAFVEVLAVS------------GGQVILTRNPAVCAAALELLWSLMREPSVVRHKACDSVNNFFAELLRPSAPGTGPRGEASRHQNKFLGQCIDFLREKA-KCTPPEGALSEAEEAAVSRSLELVRFLLEAFHPEQVGEVV 2382
+ +GA +A P H ++ A V ++ A+M + +E++LK+++ D L+ + L + L + + + F L L+ + S SLP++L+GW+Q +LI S R K++ V GAGT NG Y N R + ++VP + GG LTLFRC MR+K WWF+SEAD PGTDKD+DYYQHK T+ E P GW ++ PN G PPP + G++ P G+E N +E L W I+NKV++ + GDS HRE+V RST L+RFL+ M E L HL L W +C KA+ + VYQLL S++ + +L + LI +Q S G A K + EV F LA S G + + AA L+LLWS++ P K + + + LR P G+ H+ FLG C + L A K T E +E R ++L RF+LEA +Q +V
Sbjct: 64 LFLGATYEAIPTHANVSDQAAKVRAMEDNAIRVARAIMNHMGSASEEKLKRQSHDILNKVRYDLQRIFDRLVTTRRAETYAFYEFWRGLALKLITSQSLPLKLFGWDQVSDLIEASEVMRPPPKSFIVSGAGTTFVNGKY--------NFTGLKTDDGFFRPLSEISYEMKIPNNVPG---KVGGGKTLTLFRCTMRSKQKWWFLSEADEEQPGTDKDIDYYQHKPTTQNEEAEPPACGWSTS----PNKSGEDPPPNLQAI-GLVVPNGEEYNTLEHQLAKWAIENKVIKLVLGDSAHREIVSRSTDLIRFLAGMCEKDEPLEDNSIVSKAGVTPNEYCLKAEHLLLAWKTCTSKADAAVSDEVYQLLVSILPNLSNDLALPLIHEIQNSLKGGADKKDHLFEVAEFCSTLASSNPMDIDAGANAGGNSSVAVISDEARAAVLKLLWSVLTHPGASSLKCYEELKAYVTNELRVE-----PIGKV--HRETFLGSCKETLTVNARKITGAESI----DEILALRMVKLTRFVLEACPRDQAVVLV 582
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Match: A0A7S3Q2Z7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2Z7_9STRA) HSP 1 Score: 237 bits (605), Expect = 8.960e-61 Identity = 170/523 (32.50%), Postives = 246/523 (47.04%), Query Frame = 1
Query: 877 LAIVIGAVADARPDHQMLTRHGAIVVKT--------CTAVMAQVDVLTEDELKKENQDSLSTL---VRHLTHLMVPLGEQQMRDVFTFNANLVLRHLRSSSLPMRLWGWEQTEELIALSHRHRWNAKAYRVEGAGTACCNGIYRMAPDVAENVPRSAYHSARMRAVGAHGISSVDEDDVPKYTFQAQGGPLLTLFRCRMRTKACWWFISEADPTSPGTDKDVDYYQHKSTSMENYMPQRTGWESASDNKPNPKGLAPPPTVTPCEGVLCPPGQERNCMEWDLVNWVIDNKVVEEIFGDSIHREVVGRSTKLLRFLSSM-------------------EGALTTAHLDLIWMSCVGKAEPELQAGVYQLLNSLVECMKPELVVHLIGRLQESADGARKGEGRHEVLAFVEVLAVSGG-QVILTRNPAVCAAALELLWSLMREPSVVRHKACDSVNNFFAELLRPSAPGTGPRGEASRHQNKFLGQCIDFLREKAKCTPPEGALSEAEEAAVSRSLELVRFLLEA 2352
+ +++ A DA P + T V K+ AVM + +ED LKK + D +ST+ ++ + L++ + + F + L+ + S SLP++L+GWE EL+ +S K Y GAG NG ++ A + E+ + S++ + +DD K LTLF+C MR++ WWFISEAD PGTDKD+DYYQ KS E P TGW + G+ PPP + +GV+ P G+E N ME L W IDNKVVE + G+SIHRE+V RS +L+ FL+SM L ++HL+L W +C K + + A VYQLL S++ + EL+V L ++ S + EV F A SG + + + V L+LLWS++ P K D V NF ++ LR G R QN FL C L + AK EA+ R + L RF+LEA
Sbjct: 220 IRLILEAARDAVPQDVVTTPAQMKVKKSYEDDIICVANAVMGDLGNQSEDALKKLHHDDMSTIRWGLQAIFQLLILSRRSETYKFYAFCRDFALKLITSQSLPLKLYGWENVNELVEISASMAPPPKTYIASGAGVTFVNGEFQYAAAIGED----GFVSSKTDYCYECIVPPASKDDKSKK---------LTLFKCTMRSQQKWWFISEADEHQPGTDKDIDYYQQKSKKNEETYPPSTGWMTCKS-----AGIDPPPFLEG-KGVVAPVGEEFNTMEHQLAQWAIDNKVVELVLGNSIHREIVARSVRLICFLASMCTKDEPVEHVPAGKTMIPNAYCLNSSHLELAWKTCESKLDAAVSAEVYQLLVSILPSLPNELIVELFKTIRNSCK-----DSLFEVAEFCSAYATSGEIEGTIYFSDEVRKVLLKLLWSVLTHPDASTLKCIDDVKNFMSQELRAQRIGHVQR------QN-FLNSCKQSLTQNAK-------KENCNEASALRIVGLTRFILEA 704
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Match: A0A1Z5K2Z6_FISSO (Ubiquitin carboxyl-terminal hydrolase 9/24 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2Z6_FISSO) HSP 1 Score: 231 bits (589), Expect = 9.080e-59 Identity = 168/537 (31.28%), Postives = 254/537 (47.30%), Query Frame = 1
Query: 847 PTGPWMGAAGLAIVIGAVADARPDHQMLTRHGAIVVKTCTAVMAQVDVLTEDELKKENQDSLSTLVRHLTHL---MVPLGEQQMRDVFTFNANLVLRHLRSSSLPMRLWGWEQTEELIALSHRHRWNAKAYRVEGAGTACCNGIYRMAPDVAENVPRSAYHSARMRAVGAHGISSVDEDDVPKYTFQAQGGPLLTLFRCRMRTKACWWFISEADPTSPGTDKDVDYYQHKSTSMENYMPQRTGWESASDNKPNPKGLAPPPTVTPCEGVLCPPGQERNCMEWDLVNWVIDNKVVEEIFGDS-IHREVVGRSTKLLRFLSSM---------EGALTTAHLDLIWMSCVGKAEPELQAGVYQLLNSLVECMKPELVVHLIGRLQESA-DGARKGEGRHEVLAFVEVLAVSGGQVILTRNPAVCAAA-------LELLWSLMREPSVVRHKACDSVNNFFAELLRPSAPGTGPRGEASRHQNKFLGQCIDFL--REKAKCTPPEGALSEAEEAAVSRSLELVRFLLEAFHPEQVGEVVER 2388
P PW+ AI G A A + AI++ ++ + T++ELKK D L + L H+ +V + F +LVLR +RS SLP++L+GWEQ +LI HR + Y V AG NG+Y +V + Y I S D + K LTLFRC MR++ WWF+SEAD PGTD+D+DYYQH++ + P GW + ++ G+ PPP + +G+L PPG E +E L W I+N++VE++ GD+ IHREVV RST L++FL++M + L T+HL W +C KA+ + VYQLL S++ L + L+ +Q S D + K + EV F LA G V+ +++P+ + L LLWS++ K DS+ +F L+ P+G S H+ +FL C+ L E+ + P +EA R+++L F+ A Q ++ R
Sbjct: 190 PVLPWVHEILCAIYDGIPARATSEPDQDIEEDAILISN--DIIQFISACTDEELKKIPTDDLKVIQSDLQHIFDRLVATRRSSTNMFYAFWRDLVLRLIRSQSLPLKLFGWEQVADLIRACESHRPPPREYLVSNAGNTFANGVYTFNGEVTPD----GYARQGTEFSYVLEIPSDDPNGASKK---------LTLFRCTMRSQQKWWFLSEADEEQPGTDRDIDYYQHRAKDYGDPYPPEQGWVACKNS-----GIEPPP-ILKAQGLLVPPGAEFETLEHQLAKWAIENEIVEQVLGDTTIHREVVSRSTGLIKFLAAMCARVPPSGNQYCLQTSHLLFAWKTCTRKADAAVSLQVYQLLVSILPLCPISLAIPLLQAIQASLRDDSEKRDYLFEVSEFCSALA--SGIVMDSKDPSKSNLSDEAREEVLNLLWSVLTHSEASSLKPYDSLKQYFIYELKVE-----PKG--SEHRERFLQSCVAVLTQNERIRSAP-------LDEAQALRTVKLFDFVFRACPKPQAEKLAAR 689
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Match: A0A448ZQF1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQF1_9STRA) HSP 1 Score: 228 bits (582), Expect = 4.410e-58 Identity = 215/831 (25.87%), Postives = 342/831 (41.16%), Query Frame = 1
Query: 139 QVFEVFEVVRKGLAETSTVGWDNAHVSIKLATDVYR-SPVGKGFLLDYLTQITGIMLDQHASKFAKFEIGCAKRTLERSCDALPRLL--------------SDGYTKFMETVVMLFDPSRTIYMPMKTMWSTS--PGSPEQRTKLCNQFLVNGGFEVVAKFLESQAKDLKRKANQRVADKADAQKKLTEATAAMNEFRATQEQMVSLAAQGKTGPELQNARDIVAIAAEKARAAKVASDQATAKASAVPHGSAPTGPWMGAAGLAIVIGAVADARPDHQMLTRHGAIVVKTCTAVMAQVDVLTEDELKKENQDSLSTLVRHLTHLMVPLGEQQMRDVFTFNA---NLVLRHLRSSSLPMRLWGWEQTEELIALSHRHRWNAKAYRVEGAGTACCNGIYRMAPDVAENVPRSAYHSARMRAVGAHGISSVDE--DDVPKYTFQAQGGPLLTLFRCRMRTKACWWFISEADPTSPGTDKDVDYYQHKSTSMENYMPQRTGWESASDNKPNPKGLAPPPTVTPCEGVLCPPGQERNCMEWDLVNWVIDNKVVEE-IFGDSIHREVVGRSTKLLRFLSSM-------------------------------EGALTTAHLDLIWMSCVGKAEPELQAGVYQLLNSLVECMKPELVVHLIGRLQESAD-----------GARKGEGRH-----EVLAFVEVLAVSGGQVILTRNPA-------------VCAAALELLWSLMREPSVVRHKACDSVNNFFAELLRPSAPGTGPRGEASRHQNKFLGQCIDFLREKAKCTPPEGALSEAEEAAVSRSLELVRFLLEAFHPEQVGEVV 2382
+V +++ V L +TV W A +++ A + R S + F+ Y+ QI I+L+Q K + E C + +L + + L +D + ++ + +F + Y K W+ + G P R L F+ GF + +++ A++ + D++ + TG + D A+ A ++ + SA S PT + + A+ + D L A M + +E+ LKK + L LV L + L E + D + F + LVL+ + S SLP++L+GW+Q E L+ S HR +++ E AG NG YR ++ +R+ + IS + E +D P+ GG LTLFRC MR++ WWF+SEAD PGTD+D+DYYQHKS E P TGW + + G+ P P + G++ PPG+ERN +E L W IDNK+++ + GDS+HRE+V RS L++FL+SM + L ++HL L W +C+ K + + A +YQLL S++ L V L+ ++ S D G G + EV F E LAVS N + V A L+LLWSL+ P K+ D + + LR GT H+ +L CI L+E +K + +E + ++ F+LEA Q +V
Sbjct: 25 RVLKLWTEVGNKLDREATVVWSQAVETLQEANNYLRISREARDFVEQYMGQIVSILLEQQPLKVGQMERRCVQESLTLAVTIISNDLEIQIERGRRAPLGPNDVSCRTLDVLACVFCRKKQYYKGSKGNWNVNHLSGLPLIRLNLAETFMQEDGFARLVEYM----------ADRTITDESSS----------------------------STGVGDPSGSDTAALPISPASPSRQQQSPPQIEFSATGLSSFPTIDLLHQTLTVLFDVCNANNKKDENHLRALEQAANDVSKATMRYITSCSEEALKKVPMEDLKLLVHDLLCIFDKLIEFRRPDTYEFYSFWRGLVLKLITSQSLPLKLFGWQQMETLLEASAAHRPPPRSFVAEDAGCRFVNGEYRFKGIETDD-------GYGLRSGKDNEISYMREIPEDEPE-----GGGKTLTLFRCTMRSQQKWWFLSEADKEQPGTDRDIDYYQHKSKEHEETEPPLTGWLTCRN-----AGVDPSPKLKRI-GLMVPPGEERNTLEHQLAKWAIDNKIIDTLVLGDSVHREIVSRSVPLIKFLASMCERDFGTRTNIDGDRTAVPEESVDGKVDQDTKYCLQSSHLQLAWKTCIRKTDAAVSAQIYQLLVSILPSCPVNLAVLLLKNVRASLDQGSQPNNSSSGGISNGMNFNNDFLTEVSDFCEALAVSNDNPTYNNNNSNSKVAPVSQLSNDVRAEVLDLLWSLLIHPEASSLKSYDLLKQYVTRELRVEPGGT-------EHRKTYLRLCIVALQENSK----QLTAGTVDEIRALKMVKFTHFVLEACPRAQAAHLV 788
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Match: A0A4D9D1L0_9STRA (USP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1L0_9STRA) HSP 1 Score: 228 bits (581), Expect = 9.690e-58 Identity = 164/514 (31.91%), Postives = 240/514 (46.69%), Query Frame = 1
Query: 946 IVVKTCTAVMAQVDVLTEDELKKENQDSLSTLVRHLTHLMVPLGEQQMRDVFTFN-ANLVLRHLRSSSLPMRLWGWEQTEELIALSHRHRWNAKAYRVEGAGTACCNGIYRMAPDVAENVPRSAYHSARMRAVGAHGISSVDEDDVPKYTFQAQGGPLLTLFRCRMRTKACWWFISEADPTSPGTDKDVDYYQHKSTSMENYMPQRTGWESASDNKPNPKGLAPPPTVTPCEGVLCPPGQERNCMEWDLVNWVIDNKVVEEIFGDSIHREVVGRSTKLLRFLSSMEGALTTAHLDLIWMSCVGKAEPELQAGVYQLLNSLVEC-MKPELVVHLIGRLQESADGARKGEGRHEVLAFVEVLAVS--GGQVILTRNPAVCAAALELLWSLMREPSVVRHKACDSVNNFFAELLRPSAPGTGPRGEASRHQNKFLGQCI---------------------------DFLREKAKCTPPEGALSEAEEAAVSRSLELVRFLLEAFHPEQVGEVVERYA 2394
+V + + + L E++LK E ++S L + ++ RD + L H+RSSSLP+RL WEQ ++I ++ R A+ YRV+GAG A NGIY + + P+Y QA G +LTLFRC MR K WWFISEAD PGTD+DVDYYQH+S E P GW S KG AP PTV E LC GQE +E ++ W I+N+V+E++FG S+HREVV R+ LL+ +++M+G LT HL+ IW + +G+ E EL ++ L +L+ + P L + L +Q+S E LAFVE LA+ ++ P + L LLW +++ PS K + FA+ L+ PGT Q FL QC+ +F + ++ T + E V +L++ +FLLE F + ++R A
Sbjct: 356 VVEEVALCLREPLSTLAEEDLKLEPALAVSALAETFRKRLQDSDDEVDRDALMQSWLALAHAHIRSSSLPLRLSAWEQMGDIIRIASSARPIARRYRVKGAGEARANGIYDFVRE---------------------------RNGAPEYQHQAGDGTVLTLFRCLMRCKEKWWFISEADNACPGTDQDVDYYQHRSIFREQDEPHPVGWLVCSSGTS--KGKAPAPTVERLEP-LCDAGQEEASLEHRVLQWAIENRVLEDVFGPSMHREVVIRAGGLLKLMANMKG-LTDEHLERIWRASIGQPEAELVEEIHAALAALIPLSLTPPLTIRLFDTIQKSICAQN---AVLEALAFVEKLALDLKVQDLLALHGPEGIDSLLRLLWEVLQHPSTRSQKGVRVTRDLFAKSLQV-LPGT-------ERQTAFLKQCLWTIQLSATTYGGGVGHKKGSTLALPILNFGADDSRRTSQHQLKNVVNEDEVINALQMAQFLLEVFPATDLAPTLQRLA 827
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Match: B8C8H1_THAPS (USP domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8H1_THAPS) HSP 1 Score: 227 bits (578), Expect = 2.200e-57 Identity = 225/829 (27.14%), Postives = 348/829 (41.98%), Query Frame = 1
Query: 112 PPMISRQDMQVFEVFEVVRKGLAETSTVGWDNAHVSIKLATDVYRSPVGKGFLLDYLTQITGIMLDQHASKFAKFEIGCAKRTLERSC-----DALPRLLSDGYTKFMETVVML---FDPSRTIYMPM-KTMWSTSP--GSPEQRTKLCNQFLVNGGFEVVAKFLESQAKDLKRKANQRVADKADAQKKLTEATAAMNEFRATQEQMVSLAAQGKTGPELQNARDIVAIAAEKARAAKVASDQATAKASAVPHGSAPTGPWMGAAGLAIVIGAVADARPDHQMLTRHGAIVVKTCTAVMAQVDVLTEDELKKENQDSLSTLVRHLTHLMVPLGEQQMRDVFTFNAN---LVLRHLRSSSLPMRLWGWEQTEELIALSHRHRWNAKAYRVEGAGTACCNGIY------RMAPDVAENVPRSAYHSA--RMRAVGAHGISSVDEDDVPKYTFQAQG-GPLLTLFRCRMRTKACWWFISEADPTSPGTDKDVDYYQHKSTSMENYMPQRTGWESASDNKPNPKGLAPPPTVTPCEGVLCPPGQERNCMEWDLVNWVIDNKVVEEIFGDSIHREVVGRSTKLLRFLSSM--------------------------------------EGALTTAHLDLIWMSCVGKAEPELQAGVYQLLNSLVECMKPELVVHLIGRLQES-ADGARKGEGR-HEVLAFVEVLA-VSGGQ--------VILTRNPAVCAAALELLWSLMREPSVVRHKACDSVNNFFAELLRPSAPGTGPRGEASRHQNKFLGQCIDFLREKAKCTPPEGALSEAEEAAVSRSLELVRFLLEAFHPEQVGEVV 2382
P I +++ V GL + STV W A S++ A ++P + FL + I I+L+Q A E C +++++ + D + S TK ET+ L FD + Y + WS S G+PE R+ L F G++++A +L + + D LT A QE + ++ K + + +AAE+A+ A+ AI + DAR + AVM + + ED LKK D++ T+ L + L R +F + A+ LVL+ + S SLP++L GW E++I S +R +AY V GAG NG Y RM +N+ +Y ++ G D QA G G +LTLFRC MR++ WWFISEAD PGTDKD+DYYQHKS E P +GW + G+ PPPT+ P G P G+E N +E +L W I+N V+E + GDSIHRE+V RST L++FL+SM + L +HL L W C+ KA+ + +Y LL S++ + +L + LI + ES A + KG +EV F +A +S G ++ V L L W+++ K+ +++ + + +R P AS+ +N+FL C D +R+ + G E ++L +F+LE + E+ V+
Sbjct: 149 PMEIEPPSEAALQIWNEVDLGLKKNSTVVWQKAVDSLEAARRHIQTPQARAFLTKCMMPIVSILLEQKAFSIGHHEKECVEKSVKCALMIVKEDLEMAVQSGDVTKTCETMDGLKHVFDKKKVFYKGQSRGGWSNSSPSGNPEFRSNLITIFRRIKGYQILASYLNGRV------GTPQFPDFDCIHVVLT----------AVQETIELPSSSNKQNNQNMDPAAKATVAAERAQKAQ-----------------------------AIEL----DAR--------------RVSEAVMKHLLTVDEDTLKKST-DAIKTMNYDLQRIYERLAVSNPRAIFDYFAHARELVLKLITSQSLPLKLSGWGYLEDIIEYSKENRPPPRAYDVIGAGLGFINGRYEFEKKRRMEEGWVKNLQDISYQRVVPKLEEGAPAGAPLADGQQQ-----QASGEGKILTLFRCTMRSQHKWWFISEADLDQPGTDKDIDYYQHKSKPHEEAKPSPSGWATCRS------GIDPPPTLRPV-GFQVPEGEEYNTLEHNLAKWAIENGVIELVLGDSIHREIVARSTALIKFLASMCDRDDELEVVATTPAVPPSETSGTTGEPSPMQTEKIPNQYCLKASHLLLAWKMCMNKADAAVSTEIYHLLVSILPSLPEDLAIPLIHAIHESLAQTSDKGNHNFYEVSEFCCAIANISEGDNKNNNDKCTPISMKTQVREEILSLQWAILTHEDAWSLKSYENIKKYVSSEIRRPEP------IASKMRNQFLLHCCDVVRKHSG-----GDNMIVNETHALYMVQLTKFVLEGYPREETDGVI 890 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1708.3957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1708.3957.1 >prot_H-paniculata_contig1708.3957.1 ID=prot_H-paniculata_contig1708.3957.1|Name=mRNA_H-paniculata_contig1708.3957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=928bp SGGRLEGFEQQEDDVDGSVDGGGGRLGSIQMDMDQPRPPMISRQDMQVFEback to top mRNA from alignment at H-paniculata_contig1708:2103..12821- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1708.3957.1 ID=mRNA_H-paniculata_contig1708.3957.1|Name=mRNA_H-paniculata_contig1708.3957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10719bp|location=Sequence derived from alignment at H-paniculata_contig1708:2103..12821- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1708:2103..12821- >mRNA_H-paniculata_contig1708.3957.1 ID=mRNA_H-paniculata_contig1708.3957.1|Name=mRNA_H-paniculata_contig1708.3957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5568bp|location=Sequence derived from alignment at H-paniculata_contig1708:2103..12821- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |