prot_H-paniculata_contig17045.3944.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17045.3944.1
Unique Nameprot_H-paniculata_contig17045.3944.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length213
Homology
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BLAST of mRNA_H-paniculata_contig17045.3944.1 vs. uniprot
Match: D8LUC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC9_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.840e-24
Identity = 64/177 (36.16%), Postives = 95/177 (53.67%), Query Frame = 0 
Query:   37 PLVQFKAFLRDDWLFHERLKYKKDEHKEHRNFIMLRRNGLAEFLMENDARGYWRLERRLSPVHEQKLQKMNRMVTKRFMRKKEEAP--TEGVDYWVMDIP-QDKRHEEVLTYEIPVSRGKYHPAAVRWAREGAIYRWKQSDEVNEEEVYGVPPKFRKKVGTFSVGIKTLAPMVDRAY 210
            PLVQ  +F + DW       +K+D+ K   +F+  R N LA F    +  GYW+L RR  P                    K ++P   EG+DY V+DIP Q  R   +++YEIP+S G+YHP+++ +A++G IY         +E++ G     RKK+G+FSV + TL PMVDR +
Sbjct:   15 PLVQDGSFAKADWRITRDFFFKRDQAKNGADFLTARENKLARFNNSGEV-GYWKLVRRPIPG-----------------APKRQSPLGNEGIDYLVLDIPEQGPRRNLIVSYEIPISNGRYHPSSIMFAQKGTIYVANA-----KEQLVGPAAAARKKIGSFSVDLPTLEPMVDRTF 168
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17045.3944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUC9_ECTSI1.840e-2436.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..212
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.723

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17045contigH-paniculata_contig17045:625..4758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17045.3944.1mRNA_H-paniculata_contig17045.3944.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17045 2..4939 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17045.3944.1 ID=prot_H-paniculata_contig17045.3944.1|Name=mRNA_H-paniculata_contig17045.3944.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp
MLLWRTAVRTVAMVAWVAAFGVRIACGDKKPPPPPEPLVQFKAFLRDDWL
FHERLKYKKDEHKEHRNFIMLRRNGLAEFLMENDARGYWRLERRLSPVHE
QKLQKMNRMVTKRFMRKKEEAPTEGVDYWVMDIPQDKRHEEVLTYEIPVS
RGKYHPAAVRWAREGAIYRWKQSDEVNEEEVYGVPPKFRKKVGTFSVGIK
TLAPMVDRAYKA*
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