prot_H-paniculata_contig1704.3940.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1704.3940.1
Unique Nameprot_H-paniculata_contig1704.3940.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length147
Homology
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BLAST of mRNA_H-paniculata_contig1704.3940.1 vs. uniprot
Match: D7FNL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL3_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 1.550e-23
Identity = 66/123 (53.66%), Postives = 77/123 (62.60%), Query Frame = 0 
Query:   24 VRRGGRVRKLLYSRLCEDGLGAAAFGGVESGDEDEQESGKECDREADSEKAKVGGTRFFKSNDAPWGSGAQPLVKVELSLSKDRQPLLAEQSALAVVTFVADRHKYSAEQLCNVLVAEGFLCF 146
            VRRG R R+ ++  L ED + AAA GG+ES D    E G           A     RF  S  APWG G +PL+KV LSL +   PL AE+SALAVVTFV DRH+YSAEQL NVL AEGFLC+
Sbjct:  784 VRRGRRARRQVHPSLSEDTM-AAANGGIES-DYRSDEDGXXXXXXXXXGDAPF---RFRTSEVAPWGEGDRPLIKVRLSLLEGDAPLSAERSALAVVTFVFDRHRYSAEQLANVLTAEGFLCY 901
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BLAST of mRNA_H-paniculata_contig1704.3940.1 vs. uniprot
Match: A0A6H5L2K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2K3_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 5.600e-21
Identity = 66/133 (49.62%), Postives = 78/133 (58.65%), Query Frame = 0 
Query:   24 VRRGGRVRKLLYSRLCEDGLGAAAFGGVESGDEDEQE-SGKECDREADSEKAKVGGTRFFKSNDAPWGSGAQPLVKVE---------LSLSKDRQPLLAEQSALAVVTFVADRHKYSAEQLCNVLVAEGFLCF 146
            VRRG R R+ ++  L ED + AAA GG+ES      E SG+                RF  S  APWG G +PL+KVE         LSL +   PL AE+SALAVVTFV DRH+YSAEQL NVL AEGFLC+
Sbjct:  790 VRRGRRARRQVHPSLSEDTM-AAANGGIESDYGSGAEGSGEXXXXXXXXXXXXDAPFRFRTSEFAPWGEGDRPLIKVETALMEAKVRLSLLEGDAPLSAERSALAVVTFVFDRHRYSAEQLANVLTAEGFLCY 921
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1704.3940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNL3_ECTSI1.550e-2353.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2K3_9PHAE5.600e-2149.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1704contigH-paniculata_contig1704:5234..6157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1704.3940.1mRNA_H-paniculata_contig1704.3940.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1704 5234..6157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1704.3940.1 ID=prot_H-paniculata_contig1704.3940.1|Name=mRNA_H-paniculata_contig1704.3940.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
QLNAPENPQQQQKNTADGWVDSGVRRGGRVRKLLYSRLCEDGLGAAAFGG
VESGDEDEQESGKECDREADSEKAKVGGTRFFKSNDAPWGSGAQPLVKVE
LSLSKDRQPLLAEQSALAVVTFVADRHKYSAEQLCNVLVAEGFLCFC
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