prot_H-paniculata_contig17033.3938.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17033.3938.1
Unique Nameprot_H-paniculata_contig17033.3938.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length201
Homology
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Match: D7G858_ECTSI (Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G858_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 3.290e-93
Identity = 150/209 (71.77%), Postives = 168/209 (80.38%), Query Frame = 0
Query:    1 AVEEYVKASSSRSDLDRTSASKDKKKTGTFTGAMAVHPISGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQEKEDNG--------EIIEAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEVNYRLRDWIFSRQRYWGEPIPIYFPVEMTAGDGGDPRKGDEHKICYDQPIAV 201
            AVEEYV AS+SRSDLDRTS  K KKKTGT TGA+AVHPI+GEKVPVWTADYVLGSYGTGAVMAVPAHDERDL FAR F+L VRRVV P G K                     E++EAFTGRG++INSGEGFDGLS+EEC +A+V++LES   GRKE+NYRLRDWIFSRQRYWGEPIPIYFPVEM   +G DPR+GD+HKICYDQP+ V
Sbjct:  294 AVEEYVTASASRSDLDRTSMGKGKKKTGTDTGALAVHPITGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLAFARTFELPVRRVVKPSGGKXXXXXXXXXXXXXXXXXXXXXEVVEAFTGRGVAINSGEGFDGLSTEECAEAVVSQLESQQHGRKEINYRLRDWIFSRQRYWGEPIPIYFPVEMVDPEG-DPRRGDDHKICYDQPMPV 501          
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Match: A0A7S2CVV1_9STRA (Leucine--tRNA ligase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVV1_9STRA)

HSP 1 Score: 248 bits (632), Expect = 3.660e-76
Identity = 122/201 (60.70%), Postives = 153/201 (76.12%), Query Frame = 0
Query:    2 VEEYVKASSSRSDLDRTSASKDKKKTGTFTGAMAVHPISGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQEKEDNGEII-EAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEVNYRLRDWIFSRQRYWGEPIPIYFPVEMTAGDGGDPRKGDEHKICYDQPIAV 201
            V+EYV AS+ +SD+DRT+   D+ K+G  TGA A+HP++G +VP+W ADYVLGSYGTGAVMAVPAHD RD  FA  F L ++ VV    VK+ V   Q ++D   ++ EAF G G+++NSGEG DGL++ EC  AIV  LE+ GKG K+V Y+LRDW+FSRQRYWGEPIPIYFPVEM  G GGDPR GD+HKI +D+PIAV
Sbjct:  356 VKEYVSASARKSDMDRTATGADRGKSGVSTGAFALHPLTGAEVPIWVADYVLGSYGTGAVMAVPAHDTRDFEFASLFGLPMKTVV----VKADVVANQSEDDGTAMMDEAFCGEGVTVNSGEGLDGLTTSECKDAIVGLLEAEGKGTKQVTYKLRDWVFSRQRYWGEPIPIYFPVEMGEG-GGDPRLGDDHKIRFDEPIAV 551          
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Match: A0A7S2EKR6_9STRA (Leucine--tRNA ligase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EKR6_9STRA)

HSP 1 Score: 227 bits (578), Expect = 3.550e-67
Identity = 120/204 (58.82%), Postives = 149/204 (73.04%), Query Frame = 0
Query:    1 AVEEYVKASSSRSDLDRTSASKDKKKTGTFTGAMAVHPISGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQEKEDNGEIIEAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEVNYRLRDWIFSRQRYWGEPIPIYFPVEMTAG---DGGDPRKGDEHKICYDQPIAV 201
            AV+ YV+ +SSRSDLDRT+A   K+KTG FTG  AVHP++GEKVP+W  DYVLGSYGTGAVMAVPAHDERD  FA ++DL V+ VV P   K      ++ E N E  EAFT  G+++NSGE FDGL++ +  +AI  +L+ +GKG  ++ Y+LRDW+FSRQRYWGEPIPIYFPVE   G      DP+ G EH+I YDQPI V
Sbjct:  350 AVDAYVQKTSSRSDLDRTAA---KEKTGVFTGGYAVHPLTGEKVPIWVGDYVLGSYGTGAVMAVPAHDERDFEFAAKYDLDVKWVVEPQKNKKG----KKPELNTE--EAFTVEGVNMNSGE-FDGLTTTKAKKAITYKLKEIGKGGPKITYKLRDWVFSRQRYWGEPIPIYFPVEFPEGVDPSTVDPKDGCEHEIKYDQPIPV 543          
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Match: A0A7S4T2X0_9STRA (Leucine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T2X0_9STRA)

HSP 1 Score: 227 bits (578), Expect = 5.460e-67
Identity = 120/204 (58.82%), Postives = 149/204 (73.04%), Query Frame = 0
Query:    1 AVEEYVKASSSRSDLDRTSASKDKKKTGTFTGAMAVHPISGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQEKEDNGEIIEAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEVNYRLRDWIFSRQRYWGEPIPIYFPVEMTAG---DGGDPRKGDEHKICYDQPIAV 201
            AV+ YV+ +SSRSDLDRT+A   K+KTG FTG  AVHP++GEKVP+W  DYVLGSYGTGAVMAVPAHDERD  FA ++DL V+ VV P   K      ++ E N E  EAFT  G+++NSGE FDGL++ +  +AI  +L+ +GKG  ++ Y+LRDW+FSRQRYWGEPIPIYFPVE   G      DP+ G EH+I YDQPI V
Sbjct:  158 AVDAYVQKTSSRSDLDRTAA---KEKTGVFTGGYAVHPLTGEKVPIWVGDYVLGSYGTGAVMAVPAHDERDFEFAAKYDLDVKWVVEPQKNKKG----KKPELNTE--EAFTVEGVNMNSGE-FDGLTTTKAKKAITYKLKEIGKGGPKITYKLRDWVFSRQRYWGEPIPIYFPVEFPEGVDPSTVDPKDGCEHEIKYDQPIPV 351          
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Match: A0A6U5FWR8_9EUKA (Leucine--tRNA ligase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A6U5FWR8_9EUKA)

HSP 1 Score: 228 bits (581), Expect = 2.340e-66
Identity = 113/201 (56.22%), Postives = 144/201 (71.64%), Query Frame = 0
Query:    1 AVEEYVKASSSRSDLDRTSASKDKKKTGTFTGAMAVHPISGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQEKEDNGEIIEAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEVNYRLRDWIFSRQRYWGEPIPIYFPVEMTAGDGGDPRKGDEHKICYDQPIAV 201
            AVEEY++A+S +SD+DR     +K+KTG  TG    HPISGE +P+W ADYVL +YGTG VMAVPAHDERD  FA+++DL V++VVA        + V    D   + EA T  G+ +NSGEG DGLSS +C  A+V +L++LG+G  +V Y+LRDW+FSRQRYWGEPIPIYFPVE+ A  GGDPR GD H I + +PI V
Sbjct:  355 AVEEYMQAASFKSDMDRQM---NKEKTGVCTGLSVTHPISGEALPLWVADYVLATYGTGVVMAVPAHDERDFSFAKKYDLPVKQVVA--------QSVDAMADASVLEEAMTSFGVCVNSGEGLDGLSSADCQSAMVQKLQALGRGAAKVTYKLRDWVFSRQRYWGEPIPIYFPVEVGAA-GGDPRNGDAHTIDFSRPIPV 543          
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Match: A0A6U3T6T3_9STRA (Leucine--tRNA ligase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3T6T3_9STRA)

HSP 1 Score: 227 bits (578), Expect = 6.280e-66
Identity = 120/204 (58.82%), Postives = 149/204 (73.04%), Query Frame = 0
Query:    1 AVEEYVKASSSRSDLDRTSASKDKKKTGTFTGAMAVHPISGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQEKEDNGEIIEAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEVNYRLRDWIFSRQRYWGEPIPIYFPVEMTAG---DGGDPRKGDEHKICYDQPIAV 201
            AV+ YV+ +SSRSDLDRT+A   K+KTG FTG  AVHP++GEKVP+W  DYVLGSYGTGAVMAVPAHDERD  FA ++DL V+ VV P   K      ++ E N E  EAFT  G+++NSGE FDGL++ +  +AI  +L+ +GKG  ++ Y+LRDW+FSRQRYWGEPIPIYFPVE   G      DP+ G EH+I YDQPI V
Sbjct:  350 AVDAYVQKTSSRSDLDRTAA---KEKTGVFTGGYAVHPLTGEKVPIWVGDYVLGSYGTGAVMAVPAHDERDFEFAAKYDLDVKWVVEPQKNKKG----KKPELNTE--EAFTVEGVNMNSGE-FDGLTTTKAKKAITYKLKEIGKGGPKITYKLRDWVFSRQRYWGEPIPIYFPVEFPEGVDPSTVDPKDGCEHEIKYDQPIPV 543          
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Match: SYL_SORC5 (Leucine--tRNA ligase n=17 Tax=Sorangium cellulosum TaxID=56 RepID=SYL_SORC5)

HSP 1 Score: 226 bits (576), Expect = 7.320e-66
Identity = 114/201 (56.72%), Postives = 148/201 (73.63%), Query Frame = 0
Query:    1 AVEEYVKASSSRSDLDRTSASKDKKKTGTFTGAMAVHPISGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQEKEDNGEIIEAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEVNYRLRDWIFSRQRYWGEPIPIYFPVEMTAGDGGDPRKGDEHKICYDQPIAV 201
            AV  YV A++ +SD +R +A+  ++KTG  TG +AVHPI+G +VP+W ADYVLG YGTGAVMAVP HDERD  FAR + L +  VV+P G             + ++  A+   G+++ SGE FDGL++EEC +A++ARLE+LG+G++EVNY+LRDW+FSRQRYWGEPIPIYFPVE+ A   GDPRKG  H I YDQPIAV
Sbjct:  313 AVRAYVAAAAGKSDRERLAAAA-REKTGVDTGLVAVHPITGVEVPIWVADYVLGGYGTGAVMAVPGHDERDFSFARTYGLPIVEVVSPDGSL-----------HDQLEAAYVDPGVAVRSGE-FDGLATEECKRAVIARLEALGRGKREVNYKLRDWVFSRQRYWGEPIPIYFPVEL-ADPQGDPRKGAAHTIRYDQPIAV 499          
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Match: A0A4U1GXD5_9DELT (Leucine--tRNA ligase n=1 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1GXD5_9DELT)

HSP 1 Score: 224 bits (570), Expect = 4.450e-65
Identity = 115/201 (57.21%), Postives = 139/201 (69.15%), Query Frame = 0
Query:    1 AVEEYVKASSSRSDLDRTSASKDKKKTGTFTGAMAVHPISGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQEKEDNGEIIEAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEVNYRLRDWIFSRQRYWGEPIPIYFPVEMTAGDGGDPRKGDEHKICYDQPIAV 201
            AV  YV A++ +SDLDRT+ SK K  TG  TGAMA+HPI+G+ VP+W ADYV+G YGTGAVMAVP HDERD  FA+ FDL +  VV+P G             +  +  A+   G+ + SG  FDGL S +  +AIVA LE  GKG  ++ Y+LRDW+FSRQRYWGEPIPIYFPVEM     GDPRKGDEH I +DQPIAV
Sbjct:  299 AVRAYVDAAARKSDLDRTAVSKTK--TGVPTGAMAIHPITGQPVPIWVADYVIGGYGTGAVMAVPGHDERDFAFAKAFDLPIIEVVSPDGAL-----------HASLDAAYVDEGVLVRSGP-FDGLKSNDGKRAIVADLEKRGKGSSKITYKLRDWVFSRQRYWGEPIPIYFPVEMKDA-AGDPRKGDEHTIRFDQPIAV 484          
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Match: A0A7S0DSW1_9EUKA (Leucine--tRNA ligase (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DSW1_9EUKA)

HSP 1 Score: 214 bits (545), Expect = 6.590e-65
Identity = 113/201 (56.22%), Postives = 139/201 (69.15%), Query Frame = 0
Query:    2 VEEYVKASSSRSDLDRTS-ASKDKKKTGTFTGAMAVHPISGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQEKEDNGEIIEAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEVNYRLRDWIFSRQRYWGEPIPIYFPVEMTAGDGGDPRKGDEHKICYDQPIAV 201
            VEEYVK ++SRSD+DR + A   K+KTG  TGA A+HPI+GE VP+W ADYVLG YG+GAVMAVP HDERD  FA  FDL +++VV         +  ++KE  GE   AFTG G  INSGE FDGL  E+    I+  +E  GKG +++ Y+LRDW+FSRQRYWGEPIPIYFPV +    G DPRK  +HKI +  PI V
Sbjct:  207 VEEYVKKAASRSDMDRIAGAGAGKEKTGVDTGAKAIHPITGETVPIWVADYVLGGYGSGAVMAVPGHDERDFEFANTFDLPIKQVV---------DSGEKKE--GEEETAFTGLGKLINSGE-FDGLEGEKAKAGILDFIEKEGKGGRKIQYKLRDWVFSRQRYWGEPIPIYFPV-LGLAPGADPRKDGDHKIDFSNPIPV 394          
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Match: A0A0K1E880_CHOCO (Leucine--tRNA ligase n=2 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1E880_CHOCO)

HSP 1 Score: 223 bits (568), Expect = 1.330e-64
Identity = 115/201 (57.21%), Postives = 145/201 (72.14%), Query Frame = 0
Query:    1 AVEEYVKASSSRSDLDRTSASKDKKKTGTFTGAMAVHPISGEKVPVWTADYVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQEKEDNGEIIEAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEVNYRLRDWIFSRQRYWGEPIPIYFPVEMTAGDGGDPRKGDEHKICYDQPIAV 201
            A ++YV A+ +RSD DR  AS  K+KTG  TG +A HPI+G KVPVW ADYVLG YGTGAVMAVP HDERD  FA+   L V  VV+P G           E +G +  AFT  G ++ SGE FDGL++E C +A++ +L+SLG+G  +V+Y+LRDW+FSRQRYWGEPIPIYFPVE+ + DG DPRKG  H++ +DQPIAV
Sbjct:  342 AAQKYVAATINRSDRDRL-ASAAKEKTGVDTGLLATHPITGAKVPVWIADYVLGGYGTGAVMAVPGHDERDFAFAKVHGLPVVEVVSPDG-----------ELHGALEAAFTSDGTAVQSGE-FDGLTTEACKRAVIDKLKSLGRGDGQVSYKLRDWVFSRQRYWGEPIPIYFPVELESPDG-DPRKGAPHRVRFDQPIAV 528          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17033.3938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G858_ECTSI3.290e-9371.77Leucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S2CVV1_9STRA3.660e-7660.70Leucine--tRNA ligase (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2EKR6_9STRA3.550e-6758.82Leucine--tRNA ligase n=3 Tax=Ditylum brightwellii ... [more]
A0A7S4T2X0_9STRA5.460e-6758.82Leucine--tRNA ligase n=1 Tax=Ditylum brightwellii ... [more]
A0A6U5FWR8_9EUKA2.340e-6656.22Leucine--tRNA ligase n=1 Tax=Calcidiscus leptoporu... [more]
A0A6U3T6T3_9STRA6.280e-6658.82Leucine--tRNA ligase n=2 Tax=Ditylum brightwellii ... [more]
SYL_SORC57.320e-6656.72Leucine--tRNA ligase n=17 Tax=Sorangium cellulosum... [more]
A0A4U1GXD5_9DELT4.450e-6557.21Leucine--tRNA ligase n=1 Tax=Polyangium aurulentum... [more]
A0A7S0DSW1_9EUKA6.590e-6556.22Leucine--tRNA ligase (Fragment) n=1 Tax=Amorphochl... [more]
A0A0K1E880_CHOCO1.330e-6457.21Leucine--tRNA ligase n=2 Tax=Chondromyces crocatus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainGENE3D3.90.740.10coord: 1..154
e-value: 7.1E-42
score: 145.4
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainSUPERFAMILY50677ValRS/IleRS/LeuRS editing domaincoord: 20..156
IPR025709Leucyl-tRNA synthetase, editing domainPFAMPF13603tRNA-synt_1_2coord: 2..140
e-value: 9.2E-35
score: 119.8
IPR002302Leucine-tRNA ligasePANTHERPTHR43740FAMILY NOT NAMEDcoord: 2..174
NoneNo IPR availablePANTHERPTHR43740:SF6LEUCINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIALcoord: 2..174
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 151..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17033contigH-paniculata_contig17033:183..4035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17033.3938.1mRNA_H-paniculata_contig17033.3938.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17033 183..4035 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17033.3938.1 ID=prot_H-paniculata_contig17033.3938.1|Name=mRNA_H-paniculata_contig17033.3938.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
AVEEYVKASSSRSDLDRTSASKDKKKTGTFTGAMAVHPISGEKVPVWTAD
YVLGSYGTGAVMAVPAHDERDLVFAREFDLGVRRVVAPVGVKSPVEGVQE
KEDNGEIIEAFTGRGLSINSGEGFDGLSSEECMQAIVARLESLGKGRKEV
NYRLRDWIFSRQRYWGEPIPIYFPVEMTAGDGGDPRKGDEHKICYDQPIA
V
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009008Val/Leu/Ile-tRNA-synth_edit
IPR025709Leu_tRNA-synth_edit
IPR002302Leu-tRNA-ligase