mRNA_H-paniculata_contig17032.3937.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig17032.3937.1
Unique NamemRNA_H-paniculata_contig17032.3937.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Match: D7FPK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK9_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 2.180e-78
Identity = 131/196 (66.84%), Postives = 156/196 (79.59%), Query Frame = 1
Query:    1 QVVVMTFCRGFKVTDAKALDAANLDREAIMRAITQSFAYQMHVDGLFNGDPHPGNILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGLAKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNIRFLLRDTQPPAEAKKDSAKFLRRIHKKRQSGLKQPVDAYPGE 588
            +VVVMTFC GFKVTD+KAL A ++DREA+MR++T+SFAYQ+H+DGLFNGDPHPGNIL+Q   A +S    G+ G+G                 AA PVLLDWGLAKTLP+HLR+AF+RF+Y+  EHDFV+ML+AFEE+G+KLNRFDPAEDMHNIRFLLRDTQP +EAKKD  +F RRI KKR  GLK PVDAYPGE
Sbjct:  289 KVVVMTFCEGFKVTDSKALAAVDIDREAVMRSVTESFAYQIHIDGLFNGDPHPGNILLQP--AASSSKSGGKRGRG---------------SRAAVPVLLDWGLAKTLPDHLRIAFSRFIYAGCEHDFVSMLIAFEEIGIKLNRFDPAEDMHNIRFLLRDTQPASEAKKDVVQFHRRIAKKRGRGLKNPVDAYPGE 467          
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Match: A0A6H5KBB7_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB7_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 2.750e-78
Identity = 133/195 (68.21%), Postives = 157/195 (80.51%), Query Frame = 1
Query:    4 VVVMTFCRGFKVTDAKALDAANLDREAIMRAITQSFAYQMHVDGLFNGDPHPGNILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGLAKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNIRFLLRDTQPPAEAKKDSAKFLRRIHKKRQSGLKQPVDAYPGE 588
            VVVMTFC GFKVTD KAL A ++DREA+MR++T+SFAYQ+H+DGLFNGDPHPGNIL+Q   AT+S+ D         G+  HG         AA PVLLDWGLAKTLP+HLR+AF+RF+Y+  EHDFV+ML+AFEE+G+KLNRFDPAEDMHNIRFLLRDTQP +EAKKD+ +F RRI KKR  GLK PVDAYPGE
Sbjct:  730 VVVMTFCEGFKVTDPKALAAVDIDREAVMRSVTESFAYQIHIDGLFNGDPHPGNILLQP-AATSSRSD---------GKRDHG-------SRAAVPVLLDWGLAKTLPDHLRIAFSRFIYAGCEHDFVSMLIAFEEIGIKLNRFDPAEDMHNIRFLLRDTQPASEAKKDAVQFHRRIAKKRGRGLKNPVDAYPGE 907          
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Match: A0A7S2V6Z4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Z4_9STRA)

HSP 1 Score: 204 bits (518), Expect = 3.980e-59
Identity = 109/202 (53.96%), Postives = 138/202 (68.32%), Query Frame = 1
Query:    1 QVVVMTFCRGFKVTDAKALDAAN-LDREAIMRAITQSFAYQMHVDGLFNGDPHPGNILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGLAKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNIRFLLRDTQPPAEAKKDSAKFL-----RRIHKKRQSGLKQPVDAYPGE 588
            QV+VMTFC G+KVTD   LD  +  +RE +M+AI ++FAYQ+++DGLFNGDPHPGNIL+Q+E+                     GGGG     T   PVLLDWGLAKTLP+HLR+AF RF+Y+A E DF+ ML++FE+MG+KLNRFDPAEDM+NIRF+ RD  PP EAK    K       RR  +K  +G + PVDAYPG+
Sbjct:   78 QVLVMTFCEGWKVTDKGMLDKLDGEEREKLMKAICEAFAYQIYMDGLFNGDPHPGNILVQSEE---------------------GGGG---WVTGTKPVLLDWGLAKTLPDHLRLAFARFIYAAQEMDFIQMLISFEDMGIKLNRFDPAEDMNNIRFMFRDNAPPEEAKLKHRKHFKGWKKRRDKQKADTGRRNPVDAYPGD 255          
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Match: A0A835ZC02_9STRA (Beta-lactamase/transpeptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC02_9STRA)

HSP 1 Score: 195 bits (495), Expect = 3.240e-54
Identity = 101/195 (51.79%), Postives = 132/195 (67.69%), Query Frame = 1
Query:    4 VVVMTFCRGFKVTDAKALDAANLDREAIMRAITQSFAYQMHVDGLFNGDPHPGNILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGLAKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNIRFLLRDTQPPAEAKKDSAKFLRRIHKKRQSGLKQPVDAYPGE 588
            ++VM FC GFKVTD  A++ A+LDR AIM A+ +SFAYQ+H+ G FNGDPHPGNILI+T                           D A   +A PVLLDWGLAK LPEHLR+AF++FVY+A E D V ML + ++MG+ LNRFDP EDM NIRF++RDT PP EAK ++  F + + K+ Q+G + P++AYPG+
Sbjct:  245 LLVMRFCPGFKVTDTTAMERASLDRLAIMEAVCRSFAYQVHILGRFNGDPHPGNILIETFT-------------------------DEAGCPSARPVLLDWGLAKQLPEHLRLAFSKFVYAASEMDVVNMLESLDDMGMVLNRFDPMEDMTNIRFMMRDTAPPDEAKAETQVFKKVMIKRYQAGKRNPMEAYPGD 414          
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Match: A0A7S3XWD7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWD7_HETAK)

HSP 1 Score: 193 bits (490), Expect = 7.570e-54
Identity = 107/202 (52.97%), Postives = 131/202 (64.85%), Query Frame = 1
Query:    1 QVVVMTFCRGFKVTDAKALDAA-NLDREAIMRAITQSFAYQMHVDGLFNGDPHPGNILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGLAKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNIRFLLRDTQPPAEAKKDSAKFLRRIHKKRQS-----GLKQPVDAYPGE 588
            +VVVM+FC G+KVT+ + LD   + +RE +M+ I ++FAYQMHVDGLFNGDPHPGNIL+Q  +      D GRA                       PVLLDWGLAK   E  R+AF +FVY+  E DFV+ML AFEEMGVKLNRFDPAEDMHN R + RDT PP EA+    K+ R+  KKR++     G K PVDAYPG+
Sbjct:  270 KVVVMSFCAGWKVTERERLDRLPHRERERLMKKICEAFAYQMHVDGLFNGDPHPGNILVQAREV-----DGGRA------------------LADPRPVLLDWGLAKAFGEQKRLAFAKFVYATAELDFVSMLAAFEEMGVKLNRFDPAEDMHNTRHMFRDTAPPEEARSAHKKWERKWAKKRRADYRATGRKNPVDAYPGD 448          
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Match: A0A7S3XWC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWC8_HETAK)

HSP 1 Score: 193 bits (490), Expect = 1.080e-53
Identity = 107/202 (52.97%), Postives = 131/202 (64.85%), Query Frame = 1
Query:    1 QVVVMTFCRGFKVTDAKALDAA-NLDREAIMRAITQSFAYQMHVDGLFNGDPHPGNILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGLAKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNIRFLLRDTQPPAEAKKDSAKFLRRIHKKRQS-----GLKQPVDAYPGE 588
            +VVVM+FC G+KVT+ + LD   + +RE +M+ I ++FAYQMHVDGLFNGDPHPGNIL+Q  +      D GRA                       PVLLDWGLAK   E  R+AF +FVY+  E DFV+ML AFEEMGVKLNRFDPAEDMHN R + RDT PP EA+    K+ R+  KKR++     G K PVDAYPG+
Sbjct:  270 KVVVMSFCAGWKVTERERLDRLPHRERERLMKKICEAFAYQMHVDGLFNGDPHPGNILVQAREV-----DGGRA------------------LADPRPVLLDWGLAKAFGEQKRLAFAKFVYATAELDFVSMLAAFEEMGVKLNRFDPAEDMHNTRHMFRDTAPPEEARSAHKKWERKWAKKRRADYRATGRKNPVDAYPGD 448          
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Match: A0A7S4CTW3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CTW3_9EUGL)

HSP 1 Score: 174 bits (441), Expect = 7.430e-47
Identity = 96/201 (47.76%), Postives = 125/201 (62.19%), Query Frame = 1
Query:    1 QVVVMTFCRGFKVTDAKALDAANLDREAIMRAITQSFAYQMHVDGLFNGDPHPGNILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGLAKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNIRFLLRDTQPPAEAKKDSAKFLRRIHKK-----RQSGLKQPVDAYPGE 588
            +V VM FC G K+TD K L A   ++EA+MR + +SFAYQMH+DGLFN DPHPGNIL+Q     NS+D                          ATPVLLDWGLAK + +  R+AF + V++A + DF+ ML AF  MG+KLNR DP  DM NIRF+ RDT PP EA+KD  + ++++ K      R++G K PVDA PG+
Sbjct:  426 RVCVMEFCEGMKLTDPKVL-AKIPNKEALMRVVCESFAYQMHIDGLFNADPHPGNILVQI----NSKD---------------------GAPPVATPVLLDWGLAKIMDDDKRLAFAQLVWTAHDKDFIGMLDAFVNMGLKLNREDPLTDMSNIRFMFRDTSPPDEARKDFQREIKKMEKNDERLMRETGRKTPVDALPGD 600          
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Match: F2TZZ3_SALR5 (Serine/threonine protein kinase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZZ3_SALR5)

HSP 1 Score: 162 bits (410), Expect = 1.230e-42
Identity = 87/199 (43.72%), Postives = 118/199 (59.30%), Query Frame = 1
Query:    1 QVVVMTFCRGFKVTDAKALDAANLDREAIMRAITQSFAYQMHVDGLFNGDPHPGNILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGLAKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNIRFLLRDTQPPAEAKKDSAKFLRRIHKKRQS---GLKQPVDAYPGE 588
            +V+VM +C GFKVTD   LDA ++DRE++MR I Q++A+Q++VDG FN DPHPGNIL+Q                                   A PVLLD+G+ + LPE  + AF   +Y+A   DF  +L +F+EMG+KL R DP EDM NIRF+LRDT P AE ++D  KF   + +KRQ      + PV+A+P E
Sbjct:  800 RVIVMEYCEGFKVTDTDLLDAHDIDRESLMRRICQAYAHQVYVDGFFNCDPHPGNILVQVRDGK------------------------------AYPVLLDYGMCRQLPEEKKRAFAAMIYAATTMDFGTLLWSFDEMGLKLKRDDPFEDMKNIRFVLRDTAPGAEMRRDFKKFREDVWQKRQQLPRSQRNPVEAWPPE 968          
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Match: A0A0D2WIA7_CAPO3 (ABC1 family protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WIA7_CAPO3)

HSP 1 Score: 150 bits (380), Expect = 1.230e-38
Identity = 81/199 (40.70%), Postives = 117/199 (58.79%), Query Frame = 1
Query:    1 QVVVMTFCRGFKVTDAKALDAANLDREAIMRAITQSFAYQMHVDGLFNGDPHPGNILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGLAKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNIRFLLRDTQPPAEAKKDSAKFLR---RIHKKRQSGLKQPVDAYPGE 588
            +V+V TF  GFKVTD   LD   +DR A++R I Q++A+Q+++DG FN DPH GNIL+                                    ATPVLLD+GL K + + +R+AF+R +++A   D+  +L+AFEEMG+KLNR DP EDM+ IRF+LRDT P AEA+ +  K ++     + +     + PVD++PGE
Sbjct:  824 RVLVQTFVDGFKVTDLAELDRCGVDRLALVRRICQAYAHQVYIDGFFNADPHAGNILVDVRDGK------------------------------ATPVLLDFGLTKKINQRMRLAFSRMIHAAAAMDYGGLLLAFEEMGLKLNRDDPMEDMNAIRFVLRDTSPSAEARDEFNKHVKAQMEQYNQLPRSKRNPVDSWPGE 992          
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Match: A0A7S3VDV5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VDV5_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.020e-35
Identity = 82/201 (40.80%), Postives = 120/201 (59.70%), Query Frame = 1
Query:    1 QVVVMTFCRGFKVTDAKALDAANLDREAIMRAITQSFAYQMHVDGLFNGDPHPGNILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGLAKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNIRFLLRDTQPPAEAKKD-SAKFLRRIH--KKRQSGLKQPV--DAYPGE 588
            QV+VM FC G ++ D + +   N+ +EA+M A++Q FA+QM+   +FNGDPHPGNI I+   AT +++   R+ +              ++KT  T V+LDWGLAK LP+  R+ F + V++A   DF  M+  F+ +G++L R D AEDM  +RFLLRD  P  +A+K   AK    I   K ++ G K P+  D YPGE
Sbjct:  617 QVMVMDFCEGKRIDDVEQIKKCNVPKEAVMNAVSQVFAHQMYASDIFNGDPHPGNIFIRPGTATENRNGNVRSSK--------------SDKTGFTIVVLDWGLAKRLPDLKRIGFCQMVFAASTFDFGLMMDGFKSLGLELKREDVAEDMEGVRFLLRDMAPREKARKRVKAKMKTDIKRSKGKKKGEKVPMKSDKYPGE 803          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17032.3937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPK9_ECTSI2.180e-7866.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBB7_9PHAE2.750e-7868.21FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2V6Z4_9STRA3.980e-5953.96Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835ZC02_9STRA3.240e-5451.79Beta-lactamase/transpeptidase-like protein n=1 Tax... [more]
A0A7S3XWD7_HETAK7.570e-5452.97Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XWC8_HETAK1.080e-5352.97Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4CTW3_9EUGL7.430e-4747.76Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
F2TZZ3_SALR51.230e-4243.72Serine/threonine protein kinase n=1 Tax=Salpingoec... [more]
A0A0D2WIA7_CAPO31.230e-3840.70ABC1 family protein n=1 Tax=Capsaspora owczarzaki ... [more]
A0A7S3VDV5_9STRA2.020e-3540.80Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17032contigH-paniculata_contig17032:1048..3821 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score258.8
Seed ortholog evalue1.9e-66
Seed eggNOG ortholog2880.D7FPK9
KEGG koko:K08869,ko:K10779
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of tocopherol cyclase activity
EggNOG OGsCOG0661@1,KOG1235@2759
EC3.6.4.12
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko03000,ko03036
Exons4
Model size588
Cds size576
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17032.3937.1prot_H-paniculata_contig17032.3937.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig17032 1048..3809 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929346.7519474-CDS-H-paniculata_contig17032:1047..11881622929346.7519474-CDS-H-paniculata_contig17032:1047..1188Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17032 1048..1188 -
1691480824.3604343-CDS-H-paniculata_contig17032:1047..11881691480824.3604343-CDS-H-paniculata_contig17032:1047..1188Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17032 1048..1188 -
1622929346.764342-CDS-H-paniculata_contig17032:2029..21271622929346.764342-CDS-H-paniculata_contig17032:2029..2127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17032 2030..2127 -
1691480824.3718488-CDS-H-paniculata_contig17032:2029..21271691480824.3718488-CDS-H-paniculata_contig17032:2029..2127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17032 2030..2127 -
1622929346.7767677-CDS-H-paniculata_contig17032:3190..34191622929346.7767677-CDS-H-paniculata_contig17032:3190..3419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17032 3191..3419 -
1691480824.381047-CDS-H-paniculata_contig17032:3190..34191691480824.381047-CDS-H-paniculata_contig17032:3190..3419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17032 3191..3419 -
1622929346.7893653-CDS-H-paniculata_contig17032:3701..38091622929346.7893653-CDS-H-paniculata_contig17032:3701..3809Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17032 3702..3809 -
1691480824.3964677-CDS-H-paniculata_contig17032:3701..38091691480824.3964677-CDS-H-paniculata_contig17032:3701..3809Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig17032 3702..3809 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929346.808426-UTR-H-paniculata_contig17032:3809..38211622929346.808426-UTR-H-paniculata_contig17032:3809..3821Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17032 3810..3821 -
1691480824.4086013-UTR-H-paniculata_contig17032:3809..38211691480824.4086013-UTR-H-paniculata_contig17032:3809..3821Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig17032 3810..3821 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig17032.3937.1

>prot_H-paniculata_contig17032.3937.1 ID=prot_H-paniculata_contig17032.3937.1|Name=mRNA_H-paniculata_contig17032.3937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=192bp
MTFCRGFKVTDAKALDAANLDREAIMRAITQSFAYQMHVDGLFNGDPHPG
NILIQTEQATNSQDDEGRAGQGEGGESTHGGGGDPAEKTAATPVLLDWGL
AKTLPEHLRVAFNRFVYSAVEHDFVAMLMAFEEMGVKLNRFDPAEDMHNI
RFLLRDTQPPAEAKKDSAKFLRRIHKKRQSGLKQPVDAYPGE
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mRNA from alignment at H-paniculata_contig17032:1048..3821-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig17032.3937.1 ID=mRNA_H-paniculata_contig17032.3937.1|Name=mRNA_H-paniculata_contig17032.3937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2774bp|location=Sequence derived from alignment at H-paniculata_contig17032:1048..3821- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTAGTGGTCATGACGTTTTGCAGAGGGTTCAAAGTGACGGACGCGAA AGCCCTCGATGCTGCTAACCTCGATCGCGAAGCCATTATGCGAGCGATCA CCCAGTCCTTCGCGTACCAGGTACTGTATCTATGTACATTTGCGCGTTGT TTGTCCTGGTCTTCGACTTCCGAAGTCCGGCTTTAGTGATGAGCACGTGT AGCTCTCACTCAACGTGACATATGAAATGGTGTTTTTTGTTATCATCTGG CCGGCGCCGAAGTAAGGATTCAGACGCTGCCCTCCGCCCTTCGCCCCCCG CTTCCATCAGCACCCTTCCAACGCTAGTGCCCTCACTCTTGTTTTCGCTG TCTCTATATGCACCTTCATCCCCCCTCCCTTTCCTCCGTCAATCCATAAC AGATGCACGTTGACGGGCTGTTCAATGGAGACCCTCATCCAGGGAACATT CTCATTCAGACAGAACAGGCCACGAACAGCCAAGACGACGAGGGAAGGGC AGGGCAAGGAGAAGGAGGAGAGTCGACGCACGGTGGTGGTGGAGACCCGG CGGAAAAGACGGCGGCTACTCCGGTACTGCTAGACTGGGGTCTCGCGAAG ACCCTACCCGAGCACTTGAGGGTGGCGTTCAGTCGGTGAGTTTTTTCTTC TTCCTGCTATTTATTGTGCTGGTCTTATAGAGCTATCGGAGATTACAGGT CCTGTTTGTGCTATAGTATTACAAGATGTATACATACAAATGGGCGTCGA ATATCAGTCACCCTGGGTGATGACCCTTTTTTTCGAAGTCGAGTTTTTTC TGCCACTATTTATGTTATTTTATGAGGTGATGCTCGTGACGCCAACAGTC ATGCCAATGGAAACGAAAATTGTGTCGTCGAAGTTATTCACTTGGAAAAG AAGGGTCGACGTCTCGAGGGAAGAAAACGAGCTTGAGAAACGTTGGTCAT CCGGTGTGACGTGGAGCTAATGATACTATGGCGCAAGTACCACGTTACCT ACGTTGTATACCCTCGAAGTCGCTTTTTAGACCGACTATGTATCTAACAA CATTTTTGAGAAGGTCCTTCTGGGTTGAGTAAATGTCCTTGTGTACGACG TGTGTTACGTTAGTTCCAATGGTGGACAGATAGTCGACAACGTGTACCGT GGTATTATAAGCGCGTGGTACATTTATTTGTTGCGAGTTTTTGGGTTTCA CGTGGCGGTGGTGCCGTTTGATCCCCTGAAGGGGTGGGTGGGTGCCTGTG TGGCTTGCGTCGAGTCATCCTCAAGTTGTTGTATAATTTTCTCATCAGCG TGTGTCCAATGAGGATTTTTGCAGGGTACATAAAATACCTCAGCATGCCT TGTGTACGTACTGCATTTGTGATATATATATCGAGACGAGGCCTAGGATA GAAGACGGTTCCACCCGCCAGTAGCAAGGATTCGTGAGTCGAGTTTGTAG GTGTTCAGCGTTGATGTCTATTCCTGCCACCCATTCCTACTTTCGCTTGC ACCGTCAACAAGCCAGTGCGTTTTCCTGTTTCGCGCGTGTTGTATGTTGC TTGGTCGTGTGTGTTGCCGTCATCGCTCTGGGTATTTCTGTGGGTTCACG TTGTTGTATGAATGTTTACTGCTGTTGCCGTGTGTAGTGTAAAAAACGCC TTGTTGTTGTTGTTGATGTTGTTGTTGCTGTGCAATACTGCAAGACAGGT TCGTGTACTCTGCTGTCGAGCACGACTTCGTCGCAATGCTCATGGCCTTC GAGGAGATGGGGGTTAAATTGAACCGCTTCGACCCTGCTGAGGTGAAAAT AAACACACGAAGAAATACAGGAGGAGATCGGGAGGGGGGGGGGGGGGTAG GGCTAGGCAACCTTGAACCGTCACAAGGGAGTGTCAACTGTATAACTTGC ATATGTACTCTAGGTATAACATGAAATAGTTTTCACATGAAGGGGTAGAC AGACACTTTGCAAAAAAACATGATGTCGTAGTTGAAGGAAATGTAGAAAT ACTTAGGTAGAAATAGTTGAGTATGGAAGCAGCGGATAAAGATTTTTGCT TTAGCCTTCCGGGGGTTAAAAAAAAGAAAAGAAAAAGAGGTGTTGCTTTT TGAGTTGCATCGGAGCTTTTCTTGTTTGTTTTTCTGACAAATTGCGAATC ATCTTCCTCATCGTCTCTGCTTGCGTCTAGTTGCGTACCGCAAGCATATC GGTCCGGATTGCGTTTACGATCCGTTTTTAGGGCGGCTGTGACCACCATG GAGATATTCATCGCCATCATCAATTACTGTAAGGGTATAATTTTGCGCAC GGAAACGAATACCGAGAAAACAAGGTGGTATAATAGACACAGAGCTCTGT ATTTTACATACGTAACGCCAATGCTTTGAAAACAATTTCGATTATTCATT GTCCTTTTTCTGCGTAAAGGGGCGCAATAATGGCGGGCTTGCGTAGTTAG CGAGTAAACAAACATTCCACTGCTACGCCTCCCTTCTCAAGATGGAATAA AAGCTATACTTGAGGACAGAAGGCATTTTGGGTTGCCGCAGCCGCCACCG CCGCCCCTTGGTACTGACCTCGTCCTTTCCCTTCCCTCCCGTATGTATGA CAAAATTGTTTCGATTCTTCTTTTCCCGGGCAGGATATGCACAACATTCG ATTCTTGCTGCGCGACACGCAGCCCCCGGCGGAGGCGAAGAAAGACTCGG CGAAGTTCCTCCGTCGTATCCACAAAAAAAGACAGAGCGGGCTCAAGCAG CCTGTCGACGCCTACCCAGGTGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig17032:1048..3821-

>mRNA_H-paniculata_contig17032.3937.1 ID=mRNA_H-paniculata_contig17032.3937.1|Name=mRNA_H-paniculata_contig17032.3937.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1152bp|location=Sequence derived from alignment at H-paniculata_contig17032:1048..3821- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGTTTTGCAGAGGGTTCAAAGTGACGGACGCGAAAGCCCTCGATGC
TGCTAACCTCGATCGCGAAGCCATTATGCGAGCGATCACCCAGTCCTTCG
CGTACCAGATGACGTTTTGCAGAGGGTTCAAAGTGACGGACGCGAAAGCC
CTCGATGCTGCTAACCTCGATCGCGAAGCCATTATGCGAGCGATCACCCA
GTCCTTCGCGTACCAGATGCACGTTGACGGGCTGTTCAATGGAGACCCTC
ATCCAGGGAACATTCTCATTCAGACAGAACAGGCCACGAACAGCCAAGAC
GACGAGGGAAGGGCAGGGCAAGGAGAAGGAGGAGAGTCGACGCACGGTGG
TGGTGGAGACCCGGCGGAAAAGACGGCGGCTACTCCGGTACTGCTAGACT
GGGGTCTCGCGAAGACCCTACCCGAGCACTTGAGGGTGGCGTTCAATGCA
CGTTGACGGGCTGTTCAATGGAGACCCTCATCCAGGGAACATTCTCATTC
AGACAGAACAGGCCACGAACAGCCAAGACGACGAGGGAAGGGCAGGGCAA
GGAGAAGGAGGAGAGTCGACGCACGGTGGTGGTGGAGACCCGGCGGAAAA
GACGGCGGCTACTCCGGTACTGCTAGACTGGGGTCTCGCGAAGACCCTAC
CCGAGCACTTGAGGGTGGCGTTCAACAGGTTCGTGTACTCTGCTGTCGAG
CACGACTTCGTCGCAATGCTCATGGCCTTCGAGGAGATGGGGGTTAAATT
GAACCGCTTCGACCCTGCTGAGACAGGTTCGTGTACTCTGCTGTCGAGCA
CGACTTCGTCGCAATGCTCATGGCCTTCGAGGAGATGGGGGTTAAATTGA
ACCGCTTCGACCCTGCTGAGGATATGCACAACATTCGATTCTTGCTGCGC
GACACGCAGCCCCCGGCGGAGGCGAAGAAAGACTCGGCGAAGTTCCTCCG
TCGTATCCACAAAAAAAGACAGAGCGGGCTCAAGCAGCCTGTCGACGCCT
ACCCAGGTGAGGATATGCACAACATTCGATTCTTGCTGCGCGACACGCAG
CCCCCGGCGGAGGCGAAGAAAGACTCGGCGAAGTTCCTCCGTCGTATCCA
CAAAAAAAGACAGAGCGGGCTCAAGCAGCCTGTCGACGCCTACCCAGGTG
AG
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