mRNA_H-paniculata_contig16993.3916.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Match: D7G1P5_ECTSI (26S proteasome regulatory ATPase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P5_ECTSI) HSP 1 Score: 183 bits (465), Expect = 1.750e-57 Identity = 90/94 (95.74%), Postives = 93/94 (98.94%), Query Frame = 1
Query: 1 QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 282
+VEFGLPDLEGRAHIL IHSKSMNVDR+IRYEL+ARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN
Sbjct: 86 KVEFGLPDLEGRAHILSIHSKSMNVDRDIRYELVARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 179
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Match: A0A6H5JJZ9_9PHAE (AAA domain-containing protein n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A6H5JJZ9_9PHAE) HSP 1 Score: 186 bits (471), Expect = 2.490e-55 Identity = 91/94 (96.81%), Postives = 94/94 (100.00%), Query Frame = 1
Query: 1 QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 282
+VEFGLPDLEGRAHILGIHSKSMNVDR+IRYEL+ARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN
Sbjct: 343 KVEFGLPDLEGRAHILGIHSKSMNVDRDIRYELVARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 436
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Match: A0A7R9UDP4_9STRA (Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7R9UDP4_9STRA) HSP 1 Score: 176 bits (446), Expect = 7.450e-55 Identity = 86/94 (91.49%), Postives = 92/94 (97.87%), Query Frame = 1
Query: 1 QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 282
+VEFGLPDLEGRAHIL IH+K+M+VDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRAR+KSISEKDFL+AVNKVIKGY KFSSTPKYMVYN
Sbjct: 67 KVEFGLPDLEGRAHILKIHAKTMSVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARRKSISEKDFLEAVNKVIKGYHKFSSTPKYMVYN 160
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Match: A0A836CGS4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS4_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.320e-52 Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 1
Query: 1 QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 282
+VEFGLPDLEGRAHIL IHSKSMNVDR IRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISE+DFL+AVNKVIKGY KFSSTPKYMVYN
Sbjct: 343 KVEFGLPDLEGRAHILTIHSKSMNVDRGIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEQDFLEAVNKVIKGYSKFSSTPKYMVYN 436
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Match: K0RTL2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RTL2_THAOC) HSP 1 Score: 170 bits (430), Expect = 3.680e-52 Identity = 81/94 (86.17%), Postives = 89/94 (94.68%), Query Frame = 1
Query: 1 QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 282
+VEFGLPDLEGR HIL IHSK MN DR+IR+ELIARLCPNTTGAEL SVCTEAGMFAIRAR+KS+SEKDFLD+VNKV+KGY+KFSSTPKYMVYN
Sbjct: 86 KVEFGLPDLEGRGHILKIHSKKMNCDRDIRFELIARLCPNTTGAELHSVCTEAGMFAIRARRKSVSEKDFLDSVNKVVKGYKKFSSTPKYMVYN 179
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Match: A0A7S2SSE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSE9_9STRA) HSP 1 Score: 167 bits (423), Expect = 2.440e-51 Identity = 79/94 (84.04%), Postives = 90/94 (95.74%), Query Frame = 1
Query: 1 QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 282
+VEFGLPDLEGR HIL IH+K M+VDR+IRYEL+ARLCPNTTGAELRSVCTEAGMFAIRAR+K+I+EKD LD++NKVIKGYQKFS+TPKYMVYN
Sbjct: 68 KVEFGLPDLEGRTHILKIHAKRMSVDRDIRYELLARLCPNTTGAELRSVCTEAGMFAIRARRKAITEKDMLDSINKVIKGYQKFSATPKYMVYN 161
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Match: A0A6V1T8U9_HETAK (Hypothetical protein n=2 Tax=Chattonellaceae TaxID=658124 RepID=A0A6V1T8U9_HETAK) HSP 1 Score: 171 bits (432), Expect = 1.560e-49 Identity = 82/94 (87.23%), Postives = 91/94 (96.81%), Query Frame = 1
Query: 1 QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 282
+VEFGLPDLEGR HIL IH+++M+VDR+IRYEL+ARLCPNTTGAELRSVCTEAGMFAIRAR+KSI+EKDFLDAV KVIKGYQKFSSTPKYMVYN
Sbjct: 343 KVEFGLPDLEGRTHILKIHTRAMSVDRDIRYELLARLCPNTTGAELRSVCTEAGMFAIRARRKSITEKDFLDAVQKVIKGYQKFSSTPKYMVYN 436
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Match: A0A7S2I8S2_9STRA (Hypothetical protein n=3 Tax=Mediophyceae TaxID=589449 RepID=A0A7S2I8S2_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.050e-49 Identity = 80/94 (85.11%), Postives = 89/94 (94.68%), Query Frame = 1
Query: 1 QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 282
+VEFGLPDLEGR HIL IHSK MN DR+IR+ELIARLCPNTTGAEL SVCTEAGMF+IRAR+KS+SEKDFLD+VNKV+KGY+KFSSTPKYMVYN
Sbjct: 263 KVEFGLPDLEGRGHILKIHSKRMNCDRDIRFELIARLCPNTTGAELHSVCTEAGMFSIRARRKSVSEKDFLDSVNKVVKGYKKFSSTPKYMVYN 356
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Match: A0A482SHN7_9ARCH (26S protease regulatory subunit n=2 Tax=cellular organisms TaxID=131567 RepID=A0A482SHN7_9ARCH) HSP 1 Score: 168 bits (426), Expect = 4.430e-49 Identity = 80/94 (85.11%), Postives = 90/94 (95.74%), Query Frame = 1
Query: 1 QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 282
+VEF LPDLEGR HIL IH+K+M+VDR+IRYEL+ARLCPNTTGAELRSVCTEAGM+AIRAR+KS SEKDFLD++NKVIKGYQKFSSTPKYMVYN
Sbjct: 296 KVEFALPDLEGRTHILKIHAKTMSVDRDIRYELLARLCPNTTGAELRSVCTEAGMYAIRARRKSASEKDFLDSINKVIKGYQKFSSTPKYMVYN 389
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Match: A0A7S2PIH2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PIH2_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.140e-48 Identity = 81/94 (86.17%), Postives = 89/94 (94.68%), Query Frame = 1
Query: 1 QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCTEAGMFAIRARKKSISEKDFLDAVNKVIKGYQKFSSTPKYMVYN 282
+VEFGLPDLEGR HIL IHSK MN DR+IRYEL+ARLCPNTTGAEL SVCTEAGMFAIRAR+KS+SEKDFLD+V+KVIKGY+KFSSTPKYMVYN
Sbjct: 357 KVEFGLPDLEGRTHILKIHSKRMNCDRDIRYELLARLCPNTTGAELHSVCTEAGMFAIRARRKSVSEKDFLDSVSKVIKGYKKFSSTPKYMVYN 450 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16993.3916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16993.3916.1 >prot_H-paniculata_contig16993.3916.1 ID=prot_H-paniculata_contig16993.3916.1|Name=mRNA_H-paniculata_contig16993.3916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp QVEFGLPDLEGRAHILGIHSKSMNVDRNIRYELIARLCPNTTGAELRSVCback to top mRNA from alignment at H-paniculata_contig16993:5135..5419- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16993.3916.1 ID=mRNA_H-paniculata_contig16993.3916.1|Name=mRNA_H-paniculata_contig16993.3916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=285bp|location=Sequence derived from alignment at H-paniculata_contig16993:5135..5419- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16993:5135..5419- >mRNA_H-paniculata_contig16993.3916.1 ID=mRNA_H-paniculata_contig16993.3916.1|Name=mRNA_H-paniculata_contig16993.3916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=570bp|location=Sequence derived from alignment at H-paniculata_contig16993:5135..5419- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |