mRNA_H-paniculata_contig16990.3915.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16990.3915.1
Unique NamemRNA_H-paniculata_contig16990.3915.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Match: D7FSD7_ECTSI (Nicastrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD7_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 5.290e-58
Identity = 109/166 (65.66%), Postives = 127/166 (76.51%), Query Frame = 1 
Query:    1 NSAASGLVALLAAAESIGAAGRSGAVDIKGLLRQIVFVAFQAEAYGFVGSRRFIKD-RLEGISCQNSIDADISPTGKEICLDPLYPSVEFLKLGKAAHVVSVDQVGYLPESTLWIHAAPGASIADREMLVRASFPVEVGGDIPGGITVANASRAELPPTPLTSFVK 495
            NSA SGLVALL+AAES+G AGRSG+VD   L RQIVFVAFQ EAYGF GSRRF++D R EGISC N +D  +SPTG+E CLDPLYPS+EF KLGK AHVVSVDQVG LPESTLW+H +PGAS  D  ++   S          GGI + N++R ELPP+PLT+FVK
Sbjct:  365 NSAVSGLVALLSAAESLGTAGRSGSVDFSALPRQIVFVAFQGEAYGFTGSRRFVQDWRGEGISCLNRVDPTVSPTGQEACLDPLYPSLEFQKLGKPAHVVSVDQVGCLPESTLWVHPSPGASSVDTGVVSELSPG--------GGIVLTNSTRTELPPSPLTAFVK 522
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BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Match: A0A7S4DDP0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDP0_HETAK)

HSP 1 Score: 103 bits (257), Expect = 9.590e-23
Identity = 72/174 (41.38%), Postives = 97/174 (55.75%), Query Frame = 1 
Query:    1 NSAASGLVALLAAAESIGAAGRSGAVDIKGLLRQIVFVAFQAEAYGFVGSRRFIKDRLEGISCQNSIDADISPTGKEICLDPLYPSVEF--LKLGKAAHVVSVDQVGYLPEST---LWIHAAPGASIADREMLVRASFPVEVGGDIPGGITVANASRAE----LPPTPLTSFVK 495
            N AA+ + ALL+AAE++G A   GA+D  GL  Q     FQAE +G+VGSRRF +D L G +C N + A  + TG+  CLDPLYPS+ F  L L +   VV+VDQVG   + +   + ++          E +   +  +    D   G+TV  AS A     LPPTP TSFVK
Sbjct:   57 NDAAASVAALLSAAEALGRASEKGALD--GLAAQPALALFQAEEWGYVGSRRFARD-LAGFACANEVAAGATRTGEAACLDPLYPSLAFRDLALDQIQAVVAVDQVGIASQGSDGNVQLYVTGNG----EESMSLVTTLISTAADNVDGLTVTEASAAYSEDFLPPTPATSFVK 223
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BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Match: V9FWN4_PHYPR (Nicastrin n=11 Tax=Phytophthora TaxID=4783 RepID=V9FWN4_PHYPR)

HSP 1 Score: 101 bits (251), Expect = 8.020e-22
Identity = 74/173 (42.77%), Postives = 96/173 (55.49%), Query Frame = 1 
Query:    1 NSAASGLVALLAAAESIGAAGRSGAVDIKGLLRQIVFVAFQAEAYGFVGSRRFIKDRL------EGISCQNSIDADISPTGKEICLDPLYPSVEF--LKLGKAAHVVSVDQVGYLPES-TLWIHAAPGASIADREMLVRASFPVEVGGDIPGGITVANASRAELPPTPLTSFV 492
            N+ ASGLVALLAAA ++      G  D     +++VF AFQAE +GFVGSR+F+ D        EG +C   +D   SP G   C +P+  S EF  LKL   ++ ++VDQVG LP+S    +H  P A+  D   LV A        + P G +VA  S   LPPTPLTSFV
Sbjct:  263 NTGASGLVALLAAAHAL-----KGLPD-SAFDKKVVFAAFQAEKFGFVGSRKFLSDLQKFTKDPEG-ACAFPVDDSSSPMGPSFCTNPMLTSTEFANLKLANISYAIAVDQVGILPKSGNFTLHVNPHAN--DSSDLVDAIL------NAPSGASVAEGSTGSLPPTPLTSFV 420
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BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Match: D0NP58_PHYIT (Nicastrin n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NP58_PHYIT)

HSP 1 Score: 100 bits (248), Expect = 2.030e-21
Identity = 71/173 (41.04%), Postives = 95/173 (54.91%), Query Frame = 1 
Query:    1 NSAASGLVALLAAAESIGAAGRSGAVDIKGLLRQIVFVAFQAEAYGFVGSRRFIKDRL------EGISCQNSIDADISPTGKEICLDPLYPSVEF--LKLGKAAHVVSVDQVGYLPES-TLWIHAAPGASIADREMLVRASFPVEVGGDIPGGITVANASRAELPPTPLTSFV 492
            N+ ASGLVALLAAA ++ +      +      +++VF AFQAE +GFVGSR+F+ D        EG +C   +D   SP G   C +P+  S EF  L L   ++V++VDQVG LP+S    +H  P A+  D   LV A        + P   +VA    A LPPTPLTSFV
Sbjct:  263 NTGASGLVALLAAAHALKS------LPDSSFNKKVVFAAFQAEKFGFVGSRKFLSDLQKFTKDPEG-ACAYPVDDSSSPMGSSFCTNPMLSSTEFANLNLANISYVIAVDQVGILPKSGNFTLHVNPNAN--DSSALVDAVL------NAPSSASVAEGRTASLPPTPLTSFV 420
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BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Match: A0A6A3S396_9STRA (Nicastrin n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S396_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 6.990e-21
Identity = 74/174 (42.53%), Postives = 97/174 (55.75%), Query Frame = 1 
Query:    1 NSAASGLVALLAAAESIGAAGRSGAVDIKGLLRQIVFVAFQAEAYGFVGSRRFIKDRL------EGISCQNSIDADISPTGKEICLDPLYPSVEF--LKLGKAAHVVSVDQVGYLPESTLWIHAAPGASIADR--EMLVRASFPVEVGGDIPGGITVANASRAELPPTPLTSFV 492
            N+ ASGLVALLAAA ++      G  D     +++VF AFQAE +GFVGSR+F+ D        EG +C+ S+D   SP GK  C  P+  S EF  LKL   ++V++VDQVG  P  T  +HA P ++      ++LV AS  V          TV   S   LPPTPL+SFV
Sbjct:  267 NTGASGLVALLAAAHAL-----KGLPD-SAFEKKVVFAAFQAEKFGFVGSRKFLSDLQKFTKDPEG-ACKYSVDDSASPMGKSFCTYPMLSSTEFTGLKLANISYVIAVDQVGIQPNFT--VHANPHSNDTRDLVDVLVNASSSVR---------TVGVGSTGSLPPTPLSSFV 422
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BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Match: A0A3M6VQN6_9STRA (Nicastrin n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQN6_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.770e-20
Identity = 69/177 (38.98%), Postives = 91/177 (51.41%), Query Frame = 1 
Query:    1 NSAASGLVALLAAAESIGAAGRSGAVDIKGL-----LRQIVFVAFQAEAYGFVGSRRFIKDRLEGI-----SCQNSIDADISPTGKEICLDPLYPSVEF--LKLGKAAHVVSVDQVGYLPES-TLWIHAAPGASIADREMLVRASFPVEVGGDIPGGITVANASRAELPPTPLTSFV 492
            N+ ASGLVALLAAA ++           KGL      +++VF AFQAE +GFVGSR+F+ D  +       +C   +   +SP G   C  P+  S EF  LKL   A+ ++VDQVG LPES    +H  P A+ A   +    + P    G       +   S   LPPTPLTSFV
Sbjct:  272 NTGASGLVALLAAAHAL-----------KGLPDSVFTKKVVFAAFQAEKFGFVGSRKFLSDLQQFTKDPKGACAFPVHNSVSPMGSTFCTSPMLSSTEFANLKLANIAYAIAVDQVGILPESGNFTVHVNPHANDASNLIDAILNAPSAASG-------ITKGSTGSLPPTPLTSFV 430
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BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Match: A0A225VLQ2_9STRA (Nicastrin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLQ2_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.410e-20
Identity = 71/173 (41.04%), Postives = 92/173 (53.18%), Query Frame = 1 
Query:    1 NSAASGLVALLAAAESIGAAGRSGAVDIKGLLRQIVFVAFQAEAYGFVGSRRFIKDRL------EGISCQNSIDADISPTGKEICLDPLYPSVEF--LKLGKAAHVVSVDQVGYLPES-TLWIHAAPGASIADREMLVRASFPVEVGGDIPGGITVANASRAELPPTPLTSFV 492
            N+ ASGLVALLAAA ++      G  D     +++VF AFQAE YGFVGSR+F+ D        EG +C   +D   SP GK  C  P+  S EF  LKL   ++ ++VDQVG LP+S    +H  P A+  D   L+ A               VA  +   LPPTPL+SFV
Sbjct:  269 NTGASGLVALLAAAHAL-----KGLPD-SAFEKKVVFAAFQAEKYGFVGSRKFLSDLQKFTKDPEG-ACPYPVDDSSSPMGKSFCTSPMLSSTEFTNLKLANISYAIAVDQVGILPKSGNFTLHVNPNAN--DSSDLIDAILNAPSAAS-----AVAEGNTGSLPPTPLSSFV 427
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BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Match: K3XAK7_GLOUD (Nicastrin n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAK7_GLOUD)

HSP 1 Score: 97.1 bits (240), Expect = 2.420e-20
Identity = 71/174 (40.80%), Postives = 94/174 (54.02%), Query Frame = 1 
Query:    1 NSAASGLVALLAAAESIGAAGRSGAVDIKGLLRQIVFVAFQAEAYGFVGSRRFIKDRLEGIS------CQNSIDADISPTGKEICLDPLYPSVEFLKLGKA--AHVVSVDQVGYLPES-TLWIHAAPGASIADREMLVRASFPVEVGGDIPG-GITVANASRAELPPTPLTSFV 492
            N+ ASGLVALLAAAE++        +      ++IVF AFQAE +GFVGSRRF+ D L+  +      C   +    SP G   C +P+  SVEF KL  A  ++ ++VDQVG LP S    +H  P A+ A+       S  V+   + P  G   +  S   LPPTPLTSFV
Sbjct:  273 NTGASGLVALLAAAEALKV------IPDSDFNKKIVFAAFQAEKFGFVGSRRFLSD-LQAFTKNPTNACTAPVTGSKSPFGTNFCTEPMLSSVEFAKLALANVSYAIAVDQVGILPSSGNFTVHVNPNAAAANGS-----STLVDAIVNAPSAGAKFSTGSTGSLPPTPLTSFV 434
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BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Match: M4BVK0_HYAAE (Nicastrin n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVK0_HYAAE)

HSP 1 Score: 96.3 bits (238), Expect = 4.470e-20
Identity = 69/173 (39.88%), Postives = 96/173 (55.49%), Query Frame = 1 
Query:    1 NSAASGLVALLAAAESIGAAGRSGAVDIKGLLRQIVFVAFQAEAYGFVGSRRFIKDRL------EGISCQNSIDADISPTGKEICLDPLYPSVEF--LKLGKAAHVVSVDQVGYLPES-TLWIHAAPGASIADREMLVRASFPVEVGGDIPGGITVANASRAELPPTPLTSFV 492
            N+AASGLVALLAAA ++      G  D     +++VF AFQAE +GFVGSR+F+ D        EG +C  +++  +SP GK  C  P+  S EF  LKL   ++ ++VDQVG LP+S    +H  P A+ +   + V  S P      + G       +   LPPTPL+SFV
Sbjct:  272 NTAASGLVALLAAAHAL-----KGLPD-SAFDKKVVFAAFQAEKFGFVGSRKFLSDLQQFTRDPEG-ACAFAVEDSVSPMGKSFCTYPMLSSTEFADLKLANISYAIAVDQVGILPKSGNFTLHVNPNANDSRSLVDVITSVPSAASAVVEG-------NTGSLPPTPLSSFV 430
[Close]
BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Match: G4ZR63_PHYSP (Nicastrin n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZR63_PHYSP)

HSP 1 Score: 94.7 bits (234), Expect = 1.540e-19
Identity = 68/172 (39.53%), Postives = 92/172 (53.49%), Query Frame = 1 
Query:    1 NSAASGLVALLAAAESIGAAGRSGAVDIKGLLRQIVFVAFQAEAYGFVGSRRFIKDRLE-----GISCQNSIDADISPTGKEICLDPLYPSVEF--LKLGKAAHVVSVDQVGYLPES-TLWIHAAPGASIADREMLVRASFPVEVGGDIPGGITVANASRAELPPTPLTSFV 492
            N+ ASG+VALLAAA ++      G  D     +++VF AFQAE +GFVGSR+F+ D  +       +C+  +D   SP G+  C  P+  S EF  +KL   ++ ++VDQVG LP+S  L +H  P A+  D   LV A               V   S   LPPTPLTSFV
Sbjct:  267 NTGASGVVALLAAAHAL-----KGLPD-SAFDKKVVFAAFQAEKFGFVGSRKFLSDLQKFTKDPETACKYPVDDSSSPMGESFCTSPMLSSTEFANVKLANISYAIAVDQVGILPKSGNLTLHVNPHAN--DTSDLVDAVLSAPSAAS-----AVGEGSTGSLPPTPLTSFV 425
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16990.3915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSD7_ECTSI5.290e-5865.66Nicastrin n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A7S4DDP0_HETAK9.590e-2341.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
V9FWN4_PHYPR8.020e-2242.77Nicastrin n=11 Tax=Phytophthora TaxID=4783 RepID=V... [more]
D0NP58_PHYIT2.030e-2141.04Nicastrin n=2 Tax=Phytophthora infestans TaxID=478... [more]
A0A6A3S396_9STRA6.990e-2142.53Nicastrin n=3 Tax=Phytophthora TaxID=4783 RepID=A0... [more]
A0A3M6VQN6_9STRA1.770e-2038.98Nicastrin n=1 Tax=Peronospora effusa TaxID=542832 ... [more]
A0A225VLQ2_9STRA2.410e-2041.04Nicastrin n=1 Tax=Phytophthora megakarya TaxID=479... [more]
K3XAK7_GLOUD2.420e-2040.80Nicastrin n=1 Tax=Globisporangium ultimum (strain ... [more]
M4BVK0_HYAAE4.470e-2039.88Nicastrin n=1 Tax=Hyaloperonospora arabidopsidis (... [more]
G4ZR63_PHYSP1.540e-1939.53Nicastrin n=1 Tax=Phytophthora sojae (strain P6497... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16990contigH-paniculata_contig16990:1040..3312 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.1
Seed ortholog evalue1.3e-50
Seed eggNOG ortholog2880.D7FSD7
Preferred nameNCSTN
KEGG koko:K06171
KEGG Pathwayko04330,ko05010,map04330,map05010
KEGG ModuleM00682
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000323,GO:0000902,GO:0000904,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0001775,GO:0002252,GO:0002262,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003006,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005794,GO:0005886,GO:0005887,GO:0006508,GO:0006509,GO:0006518,GO:0006807,GO:0006810,GO:0006887,GO:0006897,GO:0006909,GO:0006955,GO:0006996,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007220,GO:0007267,GO:0007275,GO:0007389,GO:0007399,GO:0007423,GO:0007610,GO:0008150,GO:0008152,GO:0008233,GO:0008283,GO:0008594,GO:0009653,GO:0009790,GO:0009887,GO:0009987,GO:0010467,GO:0012505,GO:0012506,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016485,GO:0016787,GO:0018991,GO:0019098,GO:0019538,GO:0022008,GO:0022414,GO:0022603,GO:0023052,GO:0030141,GO:0030154,GO:0030182,GO:0030587,GO:0030659,GO:0030667,GO:0031090,GO:0031154,GO:0031224,GO:0031226,GO:0031293,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032940,GO:0032943,GO:0032989,GO:0032991,GO:0033619,GO:0034205,GO:0034641,GO:0035295,GO:0035333,GO:0035577,GO:0036230,GO:0042051,GO:0042098,GO:0042110,GO:0042119,GO:0042461,GO:0042462,GO:0042478,GO:0042582,GO:0042592,GO:0042982,GO:0042987,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043603,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044671,GO:0045055,GO:0045165,GO:0045168,GO:0045314,GO:0045321,GO:0045463,GO:0045465,GO:0045595,GO:0045664,GO:0046331,GO:0046530,GO:0046532,GO:0046649,GO:0046651,GO:0046903,GO:0048468,GO:0048513,GO:0048565,GO:0048592,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048749,GO:0048837,GO:0048856,GO:0048869,GO:0048872,GO:0050435,GO:0050673,GO:0050767,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051604,GO:0051703,GO:0051704,GO:0051716,GO:0051960,GO:0055037,GO:0055123,GO:0060284,GO:0060465,GO:0060581,GO:0065007,GO:0065008,GO:0065009,GO:0070011,GO:0070661,GO:0070765,GO:0071704,GO:0071840,GO:0071944,GO:0090596,GO:0090702,GO:0097708,GO:0098588,GO:0098657,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099120,GO:0099503,GO:0140096,GO:1901564,GO:2000026,GO:2000027
EggNOG free text desc.Notch signaling pathway
EggNOG OGsKOG2657@1,KOG2657@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Exons3
Model size497
Cds size495
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16990.3915.1prot_H-paniculata_contig16990.3915.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16990 1040..3312 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929343.81983-CDS-H-paniculata_contig16990:1039..11621622929343.81983-CDS-H-paniculata_contig16990:1039..1162Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16990 1040..1162 +
1691480823.184178-CDS-H-paniculata_contig16990:1039..11621691480823.184178-CDS-H-paniculata_contig16990:1039..1162Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16990 1040..1162 +
1622929343.8342361-CDS-H-paniculata_contig16990:2033..22191622929343.8342361-CDS-H-paniculata_contig16990:2033..2219Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16990 2034..2219 +
1691480823.1942282-CDS-H-paniculata_contig16990:2033..22191691480823.1942282-CDS-H-paniculata_contig16990:2033..2219Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16990 2034..2219 +
1622929343.853773-CDS-H-paniculata_contig16990:3126..33121622929343.853773-CDS-H-paniculata_contig16990:3126..3312Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16990 3127..3312 +
1691480823.2019095-CDS-H-paniculata_contig16990:3126..33121691480823.2019095-CDS-H-paniculata_contig16990:3126..3312Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16990 3127..3312 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16990.3915.1

>prot_H-paniculata_contig16990.3915.1 ID=prot_H-paniculata_contig16990.3915.1|Name=mRNA_H-paniculata_contig16990.3915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp
NSAASGLVALLAAAESIGAAGRSGAVDIKGLLRQIVFVAFQAEAYGFVGS
RRFIKDRLEGISCQNSIDADISPTGKEICLDPLYPSVEFLKLGKAAHVVS
VDQVGYLPESTLWIHAAPGASIADREMLVRASFPVEVGGDIPGGITVANA
SRAELPPTPLTSFVK
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mRNA from alignment at H-paniculata_contig16990:1040..3312+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16990.3915.1 ID=mRNA_H-paniculata_contig16990.3915.1|Name=mRNA_H-paniculata_contig16990.3915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2273bp|location=Sequence derived from alignment at H-paniculata_contig16990:1040..3312+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACTCGGCGGCTTCGGGCCTGGTAGCGCTCTTGGCGGCGGCCGAGTCGAT
AGGCGCCGCCGGTAGGTCCGGTGCGGTGGACATCAAGGGCCTCCTGAGAC
AGATCGTTTTCGTCGCCTTTCAGGTCCGTTTTTTGTTTCGTTTCCTTTGG
GATTTAGGTGGACGACAGTGACCGACTTCTACTGCCACCCCCCCCCCCCC
TGCTAAAGCGTTCTTGATTTGCCAAGGTATGTATATAAAAAAATACCGCG
AAGCTGTAAGAGTACAGCGCTTGCCTACCCAGAGAAGCTCTCTAGCTGTA
GTGATATCATCACGTCTTGGGTTGAAGGCATGGAGCACCTATCAAAGCCA
CTTGTCGTTCTATGTGTGTGCCCACATGACCGACGTCAGGGCCATTCCTA
GGAGGCACTGCAAATTTCGAAGCTCAGATTTATGCTACTTGAGCGATGCA
GCCTGCGAATTCGCACGTGACCGTGGCAGACATCGTTTATCGAGCGCGAC
GCGCCCTCAGAGCGACAGCTTCGAAGGTTTCCGTGCGGCTATCGTAGCAG
CATTGTCCCCAGCAACTCTTCGCATTCAGTGCGTTGTCTGCGTGCTTTTT
ATGCTATCTGCACCGTCGTCTCAAATTGCAGCGAAATGCGCCCAACAAAC
TTGGCTGCTGAGAGAAATCCTTGTCTCTAAACAATTTGATCATGTTGAAT
ACTGTTTACCTACTACAGTGGAGTGCTGTCAAAACGCCCCTGGGGGCGAC
AGTTTCTCAAACCCGACGTGTGATCCACAAAATCCATCTGTGTGCGTTCT
GAAAAGCATGGCAATCGGCACGTCTCGACGAGATCCTTTCATGGACACAA
CCTGTTGGTGTCGAGGACAAATACGGTTCGAACAAGACAAGTGTCACCGC
CCATAGACAGTTGGTTCTGACAGCACACACACACCCTACCGATACGTCCC
CCTTTTCCGTGTCTGTTTATTTTTCCATTTTGTCAAAAAAACAGGCCGAA
GCGTACGGCTTCGTGGGATCCAGGCGCTTCATCAAAGACCGCTTGGAGGG
CATCTCCTGTCAAAATTCGATCGACGCCGACATTTCTCCCACCGGGAAGG
AAATCTGCCTGGACCCCCTCTATCCCAGCGTGGAGTTCCTGAAGCTGGGG
AAGGCCGCCCACGTTGTCTCGGTCGATCAGGTACCTTGTATATAGCGTCA
AAGCCTTTGGTGACGCGCCGGGTGTTATACATTTTCAAGTATATTTTTAT
CGAAAACAACGATACCAGGGATAACAAAATTTGTGCCGTTGAAAAGATCT
CCAAGATCTCCTTCACGTCTGGCGATACACGTGCTTTTTTCGGCACTTGG
AAAGTCGTTTTGCCAGAGGAAATCAAGCTTGAAAATGTTTTTGTACACGA
TGCACCGGCAGAGGGTTTCACGGCACTTTGGTTAATACCGTATCGTCCAG
TCGTGCAGCGATTGAGGGGGCATGGGGGGTGTTCATTATACGTGTCACCC
GGAAAAATTCGAGGAAAATTTGAGGAAAAATCAAGGAAATATCAAGGAAA
TATCAAGGAAAATTCAAGGAAAATTCAAGGAAAACTCAAGGAAAATTCTC
CGGAGGGCACGGGAAACCTAGTGTCATGTATCCAGGGTTTAAAATCTGTC
CAGTGGCTCGCTGAGCTAGCCTGGTCTTGCCTTGCCGGTGGGAAAATAGA
AGATAGACCCAGACAAAAATTTCTTGCATCCAAACGACTAATTTTATCGT
CTGAAAACGATTTTTATCAAGAACACTTGCTTTGTCTCCAATCCTGATCA
TGTTTCACGTTGTTGGGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCA
CGGTGTTTTACGTTAACAAAATTAAGTTTTATTTTTTATGTTCATGGGGT
CCATTCCGTTCCGTTACGTTCCGTTCCATCCCCTCCTTCCCTCCTTGATC
CCGGAGGCGTTATTTTACTATCCTCCGTCCTACACAGCAGGGTAAAGCCG
CCACCCCACCCATCACTCCTCATGAAATCTTACATGCCCCTCGGTTTCCG
TATGTTTTCGTCGGGGGGGGGGGAGGGGGGACATTAGGTGGGGTACTTGC
CGGAATCTACTCTGTGGATTCACGCTGCACCTGGCGCGTCGATCGCCGAC
CGGGAGATGCTGGTGAGGGCTTCCTTCCCTGTTGAAGTGGGAGGCGATAT
TCCCGGGGGCATCACGGTCGCGAACGCGAGTAGGGCGGAGCTTCCGCCTA
CACCGCTGACCTCCTTCGTCAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig16990:1040..3312+

>mRNA_H-paniculata_contig16990.3915.1 ID=mRNA_H-paniculata_contig16990.3915.1|Name=mRNA_H-paniculata_contig16990.3915.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=990bp|location=Sequence derived from alignment at H-paniculata_contig16990:1040..3312+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACTCGGCGGCTTCGGGCCTGGTAGCGCTCTTGGCGGCGGCCGAGTCGAT
AGGCGCCGCCGGTAGGTCCGGTGCGGTGGACATCAAGGGCCTCCTGAGAC
AGATCGTTTTCGTCGCCTTTCAGAACTCGGCGGCTTCGGGCCTGGTAGCG
CTCTTGGCGGCGGCCGAGTCGATAGGCGCCGCCGGTAGGTCCGGTGCGGT
GGACATCAAGGGCCTCCTGAGACAGATCGTTTTCGTCGCCTTTCAGGCCG
AAGCGTACGGCTTCGTGGGATCCAGGCGCTTCATCAAAGACCGCTTGGAG
GGCATCTCCTGTCAAAATTCGATCGACGCCGACATTTCTCCCACCGGGAA
GGAAATCTGCCTGGACCCCCTCTATCCCAGCGTGGAGTTCCTGAAGCTGG
GGAAGGCCGCCCACGTTGTCTCGGTCGATCAGGCCGAAGCGTACGGCTTC
GTGGGATCCAGGCGCTTCATCAAAGACCGCTTGGAGGGCATCTCCTGTCA
AAATTCGATCGACGCCGACATTTCTCCCACCGGGAAGGAAATCTGCCTGG
ACCCCCTCTATCCCAGCGTGGAGTTCCTGAAGCTGGGGAAGGCCGCCCAC
GTTGTCTCGGTCGATCAGGTGGGGTACTTGCCGGAATCTACTCTGTGGAT
TCACGCTGCACCTGGCGCGTCGATCGCCGACCGGGAGATGCTGGTGAGGG
CTTCCTTCCCTGTTGAAGTGGGAGGCGATATTCCCGGGGGCATCACGGTC
GCGAACGCGAGTAGGGCGGAGCTTCCGCCTACACCGCTGACCTCCTTCGT
CAAGGTGGGGTACTTGCCGGAATCTACTCTGTGGATTCACGCTGCACCTG
GCGCGTCGATCGCCGACCGGGAGATGCTGGTGAGGGCTTCCTTCCCTGTT
GAAGTGGGAGGCGATATTCCCGGGGGCATCACGGTCGCGAACGCGAGTAG
GGCGGAGCTTCCGCCTACACCGCTGACCTCCTTCGTCAAG
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