mRNA_H-paniculata_contig1699.3913.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Match: A0A6H5LAT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAT6_9PHAE) HSP 1 Score: 349 bits (895), Expect = 1.120e-115 Identity = 179/246 (72.76%), Postives = 204/246 (82.93%), Query Frame = 2
Query: 374 FGQRVEAGREAQGYTPTTDAEAARTLVPSRELTYGEYDLGFFSSLVQECLSIRAGGGM---SNPGALEAEARKLCFGDIGSGCGRLVVAQALTWPWRSCRGVEKVKSLHHMGEAALAAAGRMAQGESRVRSVGGDILSPDASRLLIKMAPCALLLGDINEPEVDVADMDILFCYSSSFPAFGDLLTEFSYTLGHKLRPGTQVITTDRRLVSDGPWKFALLGEREGPNPETGGKSTAYLWEVVKSAL 1102
+ +R+E GR+AQG+ TTDA AARTLVP RELTYGEYDL FF SLV ECL++RAG S+ GALEAEAR L FGDIGSGCGRLVVAQALTWPW+SCRGVE V SLH MG+AAL A R+A+GE + LSP+ SRLL MAPC+L LGD+N+ +VD++D+D+LFCYSSSFPAFGDLLTEFSYTLGHKLRPG QVITTDRRLVSDGPW+FALLGEREG N ETGGKS AY+WEVV+SAL
Sbjct: 66 YQERIEIGRDAQGFL-TTDALAARTLVPPRELTYGEYDLDFFLSLVAECLNLRAGNSGKDDSSVGALEAEARSLIFGDIGSGCGRLVVAQALTWPWKSCRGVEIVPSLHDMGQAALQEADRLAKGEE-------NALSPETSRLLRSMAPCSLSLGDVND-DVDISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLRPGAQVITTDRRLVSDGPWEFALLGEREGRNSETGGKSIAYIWEVVRSAL 302
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Match: D7G834_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G834_ECTSI) HSP 1 Score: 157 bits (396), Expect = 8.800e-44 Identity = 71/85 (83.53%), Postives = 80/85 (94.12%), Query Frame = 2
Query: 848 EVDVADMDILFCYSSSFPAFGDLLTEFSYTLGHKLRPGTQVITTDRRLVSDGPWKFALLGEREGPNPETGGKSTAYLWEVVKSAL 1102
+V ++D+D+LFCYSSSFPAFGDLLTEFSYTLGHKL+PG QVITTDRRLVSDGPW+FALLGEREG N ETGGKS AY+WEVV+SAL
Sbjct: 3 QVGISDIDVLFCYSSSFPAFGDLLTEFSYTLGHKLQPGAQVITTDRRLVSDGPWEFALLGEREGRNSETGGKSIAYIWEVVRSAL 87
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Match: A0A7S2V145_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V145_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.820e-37 Identity = 105/299 (35.12%), Postives = 141/299 (47.16%), Query Frame = 2
Query: 305 PSSGSGAMTVPDDDNLLSYVAPDFGQRVEAGREAQGY--TPTTDAEAARTLVPSRELTYGEYDLGFFSSLVQECLSIRAGGGMSNPGALEAEARKLCFGDIGSGCGRLVVAQALTWPWRSCR------------GVEKVKSLHHMGEAALAAAGRMAQGESR------------VRSVGGDIL-SPDASRLLIKMAPCALLLGDINEPEVDV------ADMDILFCYSSSFPAFGDLLTEFSYTLGHKLRPGTQVITTDRRLVSDGPWKFALLGEREGPNPETGGKSTAYLWEVVKSAL 1102
P GS P D LL P +R E GR AQG P T ELTYGE+D+ FF +LV + L G CF D+GSGCGRLV+A L + S + G+E V LHH+G + M + ++ + + GDI SPD A ++EP +V + ++FCYSS+ +FGD L + S+ LG + GT +ITTD++LVSDGPWKF LL EGPN ETGG ST Y+W+V++S +
Sbjct: 101 PKYGSSDNHGPGDGPLLLAKLPSSDERFEIGRNAQGLFTDPNNPFGKFDTFGLDSELTYGEFDVAFFVNLVNKALLYSKFQGPR------------CFLDVGSGCGRLVLAAQLCFGHVSNQNSLKAGLLNEFVGIEVVPGLHHVGLKCMQYYQHMHEQKNNCEKANTHLKNNNITLICGDIYESPDTVITSENHASFEFQKRQLDEPRAEVTMGSVLSRAGVIFCYSSALASFGDELGQLSFALGTTAQVGTLIITTDKKLVSDGPWKFQLLETVEGPNEETGGMSTGYIWKVLQSGV 387
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Match: A0A7S0DXC4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DXC4_9EUKA) HSP 1 Score: 132 bits (332), Expect = 3.000e-33 Identity = 84/207 (40.58%), Postives = 113/207 (54.59%), Query Frame = 2
Query: 488 LGFFSSLVQECLSIRAGGGMSNPGALEAEARKLCFGDIGSGCGRLVVAQALTWPWRS-CRGVEKVKSLHHMGEAALAAAGRMAQGESRVRSVGGDILSPDASRLLIKMAPCALLLGDINEPEVDVADMDILFCYSSSFPAFGDLLTEFSYTLGHKLRPGTQVITTDRRLVSDG--PWKFALLGEREGPNPETGGKSTAYLWEVVKSA 1099
LG F +L++ + R PG LE D GSGCGRLVVA + WP G+EKV+ LH +G AA+A + + +RL LL GD ++ ++ D++F YSS+F + GDLLT+FSY+ G +LR GT+V+TTD+RL SD PW+F LL EGPN ETGG S Y+ VV+SA
Sbjct: 1 LGHFCALIERACADR-------PGGLEGATLL----DCGSGCGRLVVAASALWPELGRAVGIEKVEPLHALGMAAVA-----------------QLPAEQQARL-------TLLCGDAHDLPEEMRQADVVFAYSSAFASQGDLLTDFSYSCGTRLREGTRVVTTDKRLASDDHTPWQFELLDTLEGPNLETGGSSIGYVQRVVRSA 172
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Match: A0A835Z2B1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B1_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.480e-32 Identity = 76/176 (43.18%), Postives = 98/176 (55.68%), Query Frame = 2
Query: 599 IGSGCGRLVVAQALTWPWRSCRGVEKVKSLHHMGEAALAAAGRMAQGESRVRSVGGDILSPDASRLLIK-MAPCALLLGDI-----NEPEVDVADM-DILFCYSSSFPAFGDLLTEFSYTLGHKLRPGTQVITTDRRLVSD-GPWKFALLGEREGPNPETGGKSTAYLWEVVKSAL 1102
+ +G +V+ QAL PW+ C GVE V +LH + AALA A R ++ +APCAL LGDI P D A D++FCY S++PA GDLLT S+ L LR G V+TTDRRL S+ G W+FAL REG N ETGG S AY+WEV ++ +
Sbjct: 5 VRNGAFGIVIGQALRHPWKECAGVEIVPALHDIAAAALAEAQRAXXXXXXXXXXXXXXXXXXXXXXALRALAPCALHLGDILTPCRGTPPTDAAARADVVFCYCSTWPAAGDLLTGLSFALAAVLRKGALVVTTDRRLASEPGAWEFALRATREGVNAETGGASVAYIWEVTQNGV 180
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Match: D7FPV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPV7_ECTSI) HSP 1 Score: 126 bits (317), Expect = 1.090e-31 Identity = 68/111 (61.26%), Postives = 81/111 (72.97%), Query Frame = 2
Query: 521 LSIRAG---GGMSNPGALEAEARKLCFGDIGSGCGRLVVAQALTWPWRSCRGVEKVKSLHHMGEAALAAAGRMAQGESRVRSVGGDILSPDASRLLIKMAPCALLLGDINE 844
+S+RAG S+ GALEAEAR L FGDIGSGCGRLVVAQALTWPW+SCRGVE V SLH MG+ AL A R+A+G+ + LSP+ RLL MAPC+L LGD+N+
Sbjct: 15 ISLRAGKSGNDASSVGALEAEARSLVFGDIGSGCGRLVVAQALTWPWKSCRGVEIVPSLHDMGQVALQEADRVAKGDE-------NTLSPETLRLLRSMAPCSLSLGDVND 118
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Match: A0A7S0Q107_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q107_9EUKA) HSP 1 Score: 115 bits (287), Expect = 8.670e-27 Identity = 77/175 (44.00%), Postives = 91/175 (52.00%), Query Frame = 2
Query: 590 FGDIGSGCGRLVVAQALTWPWRS-CRGVEKVKSLHHMG-EAALAAAGRMAQGESRVRSVGGDILSPDASRLLIKMAPCALLLGDINE-----PEVDVADMDILFCYSSSFPAFGDLLTEFSYTLGHKLRPGTQVITTDRRLVSD--GPWKFALLGEREGPNPETGGKSTAYLWEV 1087
F D+GSGCGRLV A A+ P S C GVEKV LH + EAA S L PC L GD E P +A D +F YSS+FP+ GD LT+ S L GT++ITTD+RL SD G W+F LL E +GPN ETGG ST Y+WEV
Sbjct: 10 FVDVGSGCGRLVFAAAVLQPSLSRCVGVEKVAGLHDLACEAA------------------------STSPLPAGSPPCEFLCGDAFEFLGTPPPYSLAAPDCIFIYSSAFPSAGDTLTDASLAFS-MLPAGTRIITTDKRLGSDEAGRWEFQLLKELDGPNAETGGTSTGYIWEV 159
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Match: A0A7S3SUZ4_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SUZ4_EMIHU) HSP 1 Score: 114 bits (285), Expect = 1.290e-25 Identity = 89/253 (35.18%), Postives = 121/253 (47.83%), Query Frame = 2
Query: 347 NLLSYVAPD-FGQRVEAGREAQGYTPTTDAEAARTLVPSRELTYGEYDLGFFSSLVQECLSIRAGGGMSNPGALEAEARKLCFGDIGSGCGRLVVAQALTWPWRS-CRGVEKVKSLHHMGEAALAAAGRMAQGESRVRSVGGDILSPDASRLLIKMAPCALLLGDINEPEVDVADMDILFCYSSSFPAFGDLLTEFSYTLGHKLRPGTQVITTDRRLVSDGPW-KFALLGEREGPNPETGGKSTAYLWEVVKS 1096
NLLS D + R+ GR AQ + LTYGE+DL FF +LV L+ AG E E F D+GSGCGRLV+A + WP + GVE LH M A ++R D + DA + + + P + D ++FCYSS++ + G LT+FS +G PG +V+ TD+ L DG +FAL+ E EGPN ETGG S Y++EVV+S
Sbjct: 33 NLLSSAYVDSYSDRMMVGRRAQLGESMVWRSTLSAEPDNGHLTYGEFDLAFFGALVDRALARPAG-------RREPET----FVDVGSGCGRLVLAASCVWPELARAAGVETCADLHMMAVRA----------QARASLPRCDFVHGDALQAMREGGP--------------LDDATVVFCYSSAWASEGGALTDFSELVGCCCLPGCRVVVTDKWLECDGSCGEFALIDEVEGPNRETGG-SVGYIYEVVRS 249
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Match: R1EJS5_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EJS5_EMIHU) HSP 1 Score: 108 bits (269), Expect = 2.450e-23 Identity = 86/249 (34.54%), Postives = 117/249 (46.99%), Query Frame = 2
Query: 347 NLLSYVAPD-FGQRVEAGREAQGYTPTTDAEAARTLVPSRELTYGEYDLGFFSSLVQECLSIRAGGGMSNPGALEAEARKLCFGDIGSGCGRLVVAQALTWPWRS-CRGVEKVKSLHHMGEAALAAAGRMAQGESRVRSVGGDILSPDASRLLIKMAPCALLLGDINEPEVDVADMDILFCYSSSFPAFGDLLTEFSYTLGHKLRPGTQVITTDRRLVSDGPW-KFALLGEREGPNPETGGKSTAYLWE 1084
NLLS D + R+ GR AQ + LTYGE+DL FF +LV L+ AG E E F D+GSGCGRLV+A + WP + GVE LH M A ++R D + DA + + + P + D ++FCYSS++ + G LT+FS +G PG +V+ TD+ L DG +FAL+ E EGPN ETGG S Y++E
Sbjct: 13 NLLSSAYVDSYSDRMMVGRRAQLGESMVWRSTLSAEPDNGHLTYGEFDLAFFGALVDRALARPAG-------RREPET----FVDVGSGCGRLVLAASCVWPELARAAGVETCADLHMMAVRA----------QARASLPRCDFVHGDALQAMREGGP--------------LDDATVVFCYSSAWASEGGALTDFSELVGCCCLPGCRVVVTDKWLECDGSCGEFALIDEVEGPNRETGG-SVGYIYE 225
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Match: A0A7S2N9E9_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N9E9_9EUKA) HSP 1 Score: 94.7 bits (234), Expect = 5.860e-18 Identity = 77/216 (35.65%), Postives = 110/216 (50.93%), Query Frame = 2
Query: 467 LTYGEYDLGFFSSLVQECLSIRAGGGMSNPGALEAEARKLCFGDIGSGCGRLVVAQALTWPWRSCRGVEKVKSLHHMGEAALAAAGRMAQGESRVRSVGGDILSPDASRLLIKMAPCALLLGDINE--PEV-DVADMDILFCYSSSFPAFGDLLTEFSYTLGHKLRPGTQVITTDRRLVSDGP----WKFALL-GEREGPNPETGGKSTAYLWEVV 1090
L+YGE+ L FF L+ ++ P A E F D+GSGCGRLV+A AL W GVE + LH + AL++ R+A S + GG A I+MAPC + G+ + P + A+ ++F Y++++P+ G LT S TLG L G++VIT D++LVSD W F LL E N T S Y++E+V
Sbjct: 132 LSYGEFALPFFFRLLD----------LARPAAGER------FLDVGSGCGRLVIAAALAHRWELACGVETLSELHAL---ALSSHARLA---SLLAEGGG------AEEEAIEMAPCEFVCGEADALLPRILRTAESHVVFVYATAWPSSGPYLTALSRTLGSALPLGSRVITVDKKLVSDDADPPEWVFELLHAPLEADNYNTL-MSVGYVYELV 318 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1699.3913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1699.3913.1 >prot_H-paniculata_contig1699.3913.1 ID=prot_H-paniculata_contig1699.3913.1|Name=mRNA_H-paniculata_contig1699.3913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=347bp MVVSSTMRVSAIIRSTCLLFLAPPSRGFIMNMITPPPSPGWRTLPFVMRMback to top mRNA from alignment at H-paniculata_contig1699:20900..23801- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1699.3913.1 ID=mRNA_H-paniculata_contig1699.3913.1|Name=mRNA_H-paniculata_contig1699.3913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2902bp|location=Sequence derived from alignment at H-paniculata_contig1699:20900..23801- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1699:20900..23801- >mRNA_H-paniculata_contig1699.3913.1 ID=mRNA_H-paniculata_contig1699.3913.1|Name=mRNA_H-paniculata_contig1699.3913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2082bp|location=Sequence derived from alignment at H-paniculata_contig1699:20900..23801- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |