prot_H-paniculata_contig1699.3912.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1699.3912.1
Unique Nameprot_H-paniculata_contig1699.3912.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length494
Homology
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BLAST of mRNA_H-paniculata_contig1699.3912.1 vs. uniprot
Match: D7G833_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G833_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 5.250e-57
Identity = 184/524 (35.11%), Postives = 250/524 (47.71%), Query Frame = 0 
Query:    7 RRKRKRT------FKVNSGFHNKR---RLARMVPFLAVLISSLMMVAVWVRH---------ASRAAMGRRRTGTTPTSMPLAVLLEGQHEISSQAAIYADRTGRCLALEQASSLPP-QHLGPFTCVADALFLTRALALTLKYVDVVPVDVGSPPSWVHGGPS------VTATSLLGRSLAQELNLRDQGRVAAEGELPAVSASVIFVSVHEE-RTTEVWMQLIQKWLQVTGDGGLLVIHSQQGLGWGSSNWPVEGGREGNGGAQ-----GSPALREAVTKLACGENDASAAVGDLDGGVVLIRH---GKADASRFDWDCGSSNGVYAEARRPDSADAQVGPQPLQFEKIFLWATG--DYAGTGTIASVQANFGGVDAVHNNALRRIHRAACFST-KLHAGHDSAQTSLGETKKERTKNKAXXXXXXXXXXXXXXXDGEGDQQIISVGATDSAVRKCLVKQLGCYPNDVRALFAIEMIGQAA--SGKRRSSSKLRQEVLAESGTTGNLLWRALHAHSATVAAAGI 491
            RRKRKRT      F++N G   K    R AR +P++A +    M V V VR+         A  A +GR        S PLA+LLEGQH+I SQAA +AD  G CL     +  P  + LG FTC+AD  F  RALA +L++  +V VDVGS  S  HG P+         T L      +   L+ Q   A E  LP  +A +I + VH+E  + + W+ L +  ++   D G++VI   +       +     GR    G+      GS  L +AVT LAC +  A+AAVG+LDGG++++RH   G+ D       CG ++           A A   P PL+FE++FLW+T   D      I +VQA FGG + V   A RR  R+ C +T    A  ++   S    + E                      G   Q         SA R CL   L  +P DVRA FA+EM+ +A   SG  R   +LR  +  ESG  G LLWRALHA +A VAA G+
Sbjct:   10 RRKRKRTARATASFRLNYGTAGKNEGTRCARCLPWIAGMFGLTMAVVVCVRNGFKDLAREKARDARLGRAEDHAK--SHPLALLLEGQHDIGSQAARFADPDGHCLYPSPGADQPTAERLGVFTCLADTPFFLRALAESLRFRFLVVVDVGSV-SLRHGLPASPPGLGAALTGLESEMFPEAPQLQAQV-TAGEDPLPD-NADLILIDVHKEVLSADDWVDLFRSLMRALSDDGVIVIRGPRE----QVDATTGAGRNEGAGSTIRAWYGSGHLWDAVTALACDQVAAAAAVGNLDGGIIVLRHAAPGEIDLETVKARCGRNHPGQQGGGVAKGAVAAAPPHPLRFERLFLWSTAPSDITTATAIEAVQAMFGGANEVRKYARRRYDRSVCLNTLNTVATGEAVAWSEASLETESMGGGHLRAEPRHIRHKSVPQSGAAPQW-------HSAARACLETHLEEHPQDVRAGFALEMVLRATGGSGVDRQVDRLRTRMTEESGPAGGLLWRALHARAAGVAATGL 517
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1699.3912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G833_ECTSI5.250e-5735.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 42..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 30..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..493
NoneNo IPR availableTMHMMTMhelixcoord: 30..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1699contigH-paniculata_contig1699:14089..20855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1699.3912.1mRNA_H-paniculata_contig1699.3912.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1699 13712..20990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1699.3912.1 ID=prot_H-paniculata_contig1699.3912.1|Name=mRNA_H-paniculata_contig1699.3912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=494bp
MGSPQSRRKRKRTFKVNSGFHNKRRLARMVPFLAVLISSLMMVAVWVRHA
SRAAMGRRRTGTTPTSMPLAVLLEGQHEISSQAAIYADRTGRCLALEQAS
SLPPQHLGPFTCVADALFLTRALALTLKYVDVVPVDVGSPPSWVHGGPSV
TATSLLGRSLAQELNLRDQGRVAAEGELPAVSASVIFVSVHEERTTEVWM
QLIQKWLQVTGDGGLLVIHSQQGLGWGSSNWPVEGGREGNGGAQGSPALR
EAVTKLACGENDASAAVGDLDGGVVLIRHGKADASRFDWDCGSSNGVYAE
ARRPDSADAQVGPQPLQFEKIFLWATGDYAGTGTIASVQANFGGVDAVHN
NALRRIHRAACFSTKLHAGHDSAQTSLGETKKERTKNKAKKSSAREREKG
KKRGDGEGDQQIISVGATDSAVRKCLVKQLGCYPNDVRALFAIEMIGQAA
SGKRRSSSKLRQEVLAESGTTGNLLWRALHAHSATVAAAGITA*
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