prot_H-paniculata_contig16988.3911.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16988.3911.1
Unique Nameprot_H-paniculata_contig16988.3911.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length47
Homology
BLAST of mRNA_H-paniculata_contig16988.3911.1 vs. uniprot
Match: D7FRV7_ECTSI (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV7_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 3.560e-9
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 IRCAECINQPHGVDLCVECFAEGKEPMEHKKTHKYRVMDKLSEKVFT 47
            IRCAEC +    VDLCV CF  G EP +HKKTH YRVMDKL + +++
Sbjct:   26 IRCAECKDV---VDLCVSCFFSGSEPRQHKKTHSYRVMDKLHKPIYS 69          
BLAST of mRNA_H-paniculata_contig16988.3911.1 vs. uniprot
Match: A0A6H5JL08_9PHAE (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL08_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 6.660e-9
Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 IRCAECINQPHGVDLCVECFAEGKEPMEHKKTHKYRVMDKLSEKVFT 47
            IRC EC  +   VDLC  CF  G EP+ HKKTH YRVMDKL + +FT
Sbjct:   63 IRCEECKQE---VDLCAACFFAGMEPLGHKKTHSYRVMDKLDKPIFT 106          
BLAST of mRNA_H-paniculata_contig16988.3911.1 vs. uniprot
Match: A0A0L0F9W4_9EUKA (ZZ-type domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0F9W4_9EUKA)

HSP 1 Score: 50.1 bits (118), Expect = 3.830e-6
Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 0
Query:    1 IRCAECINQPHGVDLCVECFAEGKEPMEHKKTHKYRVMD 39
            IRC EC + P    +C++CFA G+EP  HK+TH YRV+D
Sbjct:   87 IRCVECTDVP----ICMKCFASGREPATHKRTHSYRVID 121          
BLAST of mRNA_H-paniculata_contig16988.3911.1 vs. uniprot
Match: A0A4V1IXD9_9FUNG (Transcriptional adapter 2 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4V1IXD9_9FUNG)

HSP 1 Score: 50.8 bits (120), Expect = 4.770e-6
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 IRCAECINQPHGVDLCVECFAEGKEPMEHKKTHKYRVMDKLS 42
            I+C  C +    V+LCVECFA+GKEP  H+  H YRVMD+L+
Sbjct:   23 IKCGVCSD----VELCVECFAQGKEPSTHRAGHSYRVMDRLT 60          
BLAST of mRNA_H-paniculata_contig16988.3911.1 vs. uniprot
Match: A0A165A6L2_9AGAM (Transcriptional adapter 2 n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A165A6L2_9AGAM)

HSP 1 Score: 50.1 bits (118), Expect = 8.950e-6
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 IRCAE--CINQPHGVDLCVECFAEGKEPMEHKKTHKYRVMDKLSEKVFT 47
            I+CAE  C   P GVDLC  CF  GKE   HK+TH YRV++  SE +F+
Sbjct:   42 IKCAEPEC-GPPEGVDLCPNCFCNGKEFNNHKRTHPYRVVEVHSEPIFS 89          
BLAST of mRNA_H-paniculata_contig16988.3911.1 vs. uniprot
Match: A0A4D8XTF3_9ALVE (Uncharacterized protein n=1 Tax=Perkinsus sp. BL_2016 TaxID=2494336 RepID=A0A4D8XTF3_9ALVE)

HSP 1 Score: 48.9 bits (115), Expect = 2.290e-5
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    1 IRCAECINQPHGVDLCVECFAEGKEPMEHKKTHKYRVMDKL 41
            IRCAEC       DLC++CF+ G E   HK+TH YRVM+KL
Sbjct:   58 IRCAEC----QEFDLCLDCFSVGAEISSHKRTHSYRVMEKL 94          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16988.3911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FRV7_ECTSI3.560e-959.57Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JL08_9PHAE6.660e-959.57Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0L0F9W4_9EUKA3.830e-653.85ZZ-type domain-containing protein (Fragment) n=1 T... [more]
A0A4V1IXD9_9FUNG4.770e-654.76Transcriptional adapter 2 n=1 Tax=Thamnocephalis s... [more]
A0A165A6L2_9AGAM8.950e-653.06Transcriptional adapter 2 n=2 Tax=Sistotremastrum ... [more]
A0A4D8XTF3_9ALVE2.290e-556.10Uncharacterized protein n=1 Tax=Perkinsus sp. BL_2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.90coord: 1..39
e-value: 1.2E-5
score: 26.7
NoneNo IPR availablePANTHERPTHR12374TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDcoord: 1..46
NoneNo IPR availablePANTHERPTHR12374:SF20TRANSCRIPTIONAL ADAPTER 2-BETAcoord: 1..46
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16988contigH-paniculata_contig16988:5130..5270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16988.3911.1mRNA_H-paniculata_contig16988.3911.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16988 5130..5270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16988.3911.1 ID=prot_H-paniculata_contig16988.3911.1|Name=mRNA_H-paniculata_contig16988.3911.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=47bp
IRCAECINQPHGVDLCVECFAEGKEPMEHKKTHKYRVMDKLSEKVFT
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