prot_H-paniculata_contig16986.3909.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16986.3909.1
Unique Nameprot_H-paniculata_contig16986.3909.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
BLAST of mRNA_H-paniculata_contig16986.3909.1 vs. uniprot
Match: D8LAY6_ECTSI (Nephroretinin 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY6_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 2.590e-19
Identity = 45/71 (63.38%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    3 LKHILWKVESMGISLAEAFGVFDNDGSGFITVRELEEGLRTLGVFEAIPKEQVCALLRKLKKSHGSTVTEN 73
            LK+I+ K ESMG SLAE FGVFD DGSGFIT  ELEEGLR L VF+A+P++QV +L RKLK S   +  +N
Sbjct: 1501 LKNIVMKAESMGTSLAEVFGVFDKDGSGFITAAELEEGLRELRVFDAVPRDQVISLARKLKSSSSFSGRDN 1571          
BLAST of mRNA_H-paniculata_contig16986.3909.1 vs. uniprot
Match: A0A6H5JNY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY0_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 6.460e-19
Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    2 KLKHILWKVESMGISLAEAFGVFDNDGSGFITVRELEEGLRTLGVFEAIPKEQVCALLRKLKKSHGSTVTEN 73
            KLK+I+ K ESMG SLAE FGVFD DGSGFIT  ELEEGLR L VF+ +P++QV +  RKLK S   +  +N
Sbjct:  274 KLKNIVMKAESMGTSLAEVFGVFDKDGSGFITAAELEEGLRELRVFDTVPRDQVISFARKLKSSSSFSGRDN 345          
BLAST of mRNA_H-paniculata_contig16986.3909.1 vs. uniprot
Match: A0A835YU49_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU49_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 5.740e-10
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   11 ESMGISLAEAFGVFDNDGSGFITVRELEEGLRTLGVFEAIPKEQVCALLRK 61
            ESMG S+AEAF  FD +G G IT  ELEEGLR LGVF A+P ++V  LL++
Sbjct: 2015 ESMGTSIAEAFTAFDKNGDGAITPSELEEGLRALGVFSAVPPKEVTHLLQR 2065          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16986.3909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LAY6_ECTSI2.590e-1963.38Nephroretinin 4 n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5JNY0_9PHAE6.460e-1961.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YU49_9STRA5.740e-1060.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 16..44
e-value: 0.0037
score: 26.5
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 17..45
e-value: 6.9E-7
score: 28.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 12..47
score: 11.305
NoneNo IPR availableGENE3D1.10.238.10coord: 16..74
e-value: 8.6E-10
score: 40.8
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 25..37
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 17..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16986contigH-paniculata_contig16986:2033..3595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16986.3909.1mRNA_H-paniculata_contig16986.3909.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16986 2031..3595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16986.3909.1 ID=prot_H-paniculata_contig16986.3909.1|Name=mRNA_H-paniculata_contig16986.3909.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
FKLKHILWKVESMGISLAEAFGVFDNDGSGFITVRELEEGLRTLGVFEAI
PKEQVCALLRKLKKSHGSTVTENACTK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair