prot_H-paniculata_contig1698.3907.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1698.3907.1
Unique Name	prot_H-paniculata_contig1698.3907.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	87

Homology

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BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Match: A0A6H5L594_9PHAE (Ribosomal_L23eN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L594_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 3.980e-49
Identity = 81/86 (94.19%), Postives = 84/86 (97.67%), Query Frame = 0

Query:    1 MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIECQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII 86
            M KHRI+KFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIE QNVNTLIRPDGKKKAYVRLTQ+FDALE+ANKIGII
Sbjct:   59 MNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEVANKIGII 144

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BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Match: A0A835Z6Z2_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z2_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.120e-42
Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = 0

Query:    1 MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIECQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII 86
            M K RI+K+PLTTESAMKKIEDNNTLVFIVDVK+NKRQIK AV+ALY+I CQ VNTLIRPDG KKAYVRLTQ++DALE+ANKIGII
Sbjct:   63 MDKFRIIKYPLTTESAMKKIEDNNTLVFIVDVKANKRQIKAAVRALYEISCQKVNTLIRPDGLKKAYVRLTQDYDALEVANKIGII 148

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BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Match: A0A7S2STG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STG4_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.420e-42
Identity = 69/86 (80.23%), Postives = 81/86 (94.19%), Query Frame = 0

Query:    1 MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIECQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII 86
            M KHRI+K+PLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAV  ++DI+CQ VNTLIRPDG+KKAYVRLTQ++DAL++AN+IGII
Sbjct:   71 MDKHRIIKYPLTTESAMKKIEDNNTLVFIVDVTANKRQIKDAVSQMHDIQCQKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 156

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BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Match: A0A6U1J6R7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1J6R7_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.500e-42
Identity = 68/86 (79.07%), Postives = 81/86 (94.19%), Query Frame = 0

Query:    1 MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIECQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII 86
            M K+R++K+PLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAVKA+Y+I C  VNTLIRPDG+KKAYVRLTQ++DAL++AN+IGII
Sbjct:   55 MDKYRVIKYPLTTESAMKKIEDNNTLVFIVDVAANKRQIKDAVKAMYEISCSKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 140

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BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Match: F0YN25_AURAN (60S ribosomal protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN25_AURAN)

HSP 1 Score: 140 bits (353), Expect = 8.010e-42
Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 0

Query:    1 MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIECQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII 86
            M K+R++K+PLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAVK +Y+I C  VNTLIRPDG+KKAYVRLTQ++DAL++AN+IGII
Sbjct:    1 MDKYRVIKYPLTTESAMKKIEDNNTLVFIVDVLANKRQIKDAVKQMYEIACAKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 86

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BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Match: A0A7S4QLV7_9DINO (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A7S4QLV7_9DINO)

HSP 1 Score: 138 bits (347), Expect = 4.430e-40
Identity = 65/86 (75.58%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    1 MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIECQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII 86
            M K+R +K+PLTTESAMKKIEDNNTLVFIVD+ +NKRQIK+AV+ LY+I+C  VNTL+RPDG KKAYVRLTQ+FDAL++AN+IGII
Sbjct:   64 MDKYRTIKYPLTTESAMKKIEDNNTLVFIVDISANKRQIKEAVRQLYEIQCAKVNTLVRPDGLKKAYVRLTQDFDALDVANRIGII 149

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BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Match: A0A7S0YJH4_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YJH4_9CRYP)

HSP 1 Score: 137 bits (344), Expect = 1.390e-39
Identity = 67/86 (77.91%), Postives = 77/86 (89.53%), Query Frame = 0

Query:    1 MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIECQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII 86
            M + +I+K+PLTTESAMKKIEDNNTLVFIVDV+SNKRQI  AVK +YDI C  VNTL+RPDG KKAYVRLTQ+FDAL++ANKIGII
Sbjct:   67 MDQFQIIKYPLTTESAMKKIEDNNTLVFIVDVRSNKRQISQAVKKMYDIVCARVNTLVRPDGVKKAYVRLTQDFDALDVANKIGII 152

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BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Match: A0A7S2DT56_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DT56_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.850e-39
Identity = 66/86 (76.74%), Postives = 79/86 (91.86%), Query Frame = 0

Query:    1 MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIECQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII 86
            + K+ I+K PLTTESAMKKIEDNNTLVFIVDVK+NKRQIK AV  ++DI+CQ VNTLIRPDG+KKAYVRLTQ++DAL++AN+IGII
Sbjct:   65 LDKYHIIKCPLTTESAMKKIEDNNTLVFIVDVKANKRQIKQAVTNMHDIQCQKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 150

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BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Match: A0A3F2RWD3_9STRA (Ribosomal_L23eN domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWD3_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.000e-38
Identity = 66/86 (76.74%), Postives = 78/86 (90.70%), Query Frame = 0

Query:    1 MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIECQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII 86
            M K+RI+K PLTTESAMKKIEDNNTLVF+VD+ SNKRQIKDAVK LYDI+   VNTLIRPDG+KKAYVRLT ++DAL++AN+IG+I
Sbjct:   63 MDKYRIIKSPLTTESAMKKIEDNNTLVFLVDLLSNKRQIKDAVKQLYDIKVAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148

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BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Match: A0A2D4BQZ7_PYTIN (60S ribosomal protein L23a putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQZ7_PYTIN)

HSP 1 Score: 134 bits (337), Expect = 1.430e-38
Identity = 64/86 (74.42%), Postives = 78/86 (90.70%), Query Frame = 0

Query:    1 MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIECQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII 86
            M K+RI+K PLTTESAMKKIEDNNTLVF+VD+ +NKRQIKDA+K LYDI+   VNTLIRPDG+KKAYVRLT ++DAL++AN+IG+I
Sbjct:   63 MDKYRIIKSPLTTESAMKKIEDNNTLVFLVDILANKRQIKDAIKQLYDIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1698.3907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L594_9PHAE	3.980e-49	94.19	Ribosomal_L23eN domain-containing protein n=2 Tax=...	[more]
A0A835Z6Z2_9STRA	1.120e-42	83.72	Ribosomal protein L23/L15e core domain-containing ...	[more]
A0A7S2STG4_9STRA	1.420e-42	80.23	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A6U1J6R7_9STRA	2.500e-42	79.07	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
F0YN25_AURAN	8.010e-42	77.91	60S ribosomal protein n=1 Tax=Aureococcus anophage...	[more]
A0A7S4QLV7_9DINO	4.430e-40	75.58	Hypothetical protein n=3 Tax=Sar TaxID=2698737 Rep...	[more]
A0A7S0YJH4_9CRYP	1.390e-39	77.91	Hypothetical protein n=1 Tax=Hemiselmis tepida Tax...	[more]
A0A7S2DT56_9STRA	1.850e-39	76.74	Hypothetical protein n=2 Tax=Dictyocha speculum Ta...	[more]
A0A3F2RWD3_9STRA	1.000e-38	76.74	Ribosomal_L23eN domain-containing protein n=2 Tax=...	[more]
A0A2D4BQZ7_PYTIN	1.430e-38	74.42	60S ribosomal protein L23a putative n=1 Tax=Pythiu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013025	Ribosomal protein L25/L23	PFAM	PF00276	Ribosomal_L23	coord: 6..66 e-value: 7.8E-15 score: 55.0
IPR013025	Ribosomal protein L25/L23	HAMAP	MF_01369_A	Ribosomal_L23_A	coord: 6..86 score: 21.415
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..86 e-value: 1.2E-43 score: 150.0
IPR019985	Ribosomal protein L23	TIGRFAM	TIGR03636	TIGR03636	coord: 10..86 e-value: 7.3E-29 score: 97.9
None	No IPR available	PANTHER	PTHR11620:SF64		coord: 4..84
None	No IPR available	PANTHER	PTHR11620	60S RIBOSOMAL PROTEIN L23A	coord: 4..84
IPR001014	Ribosomal protein L23/L25, conserved site	PROSITE	PS00050	RIBOSOMAL_L23	coord: 64..79
IPR012678	Ribosomal protein L23/L15e core domain superfamily	SUPERFAMILY	54189	Ribosomal proteins S24e, L23 and L15e	coord: 5..78

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1698	contig	H-paniculata_contig1698:17878..18866 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1698.3907.1	mRNA_H-paniculata_contig1698.3907.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1698 16242..19271 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1698.3907.1 ID=prot_H-paniculata_contig1698.3907.1|Name=mRNA_H-paniculata_contig1698.3907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp
MTKHRIVKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIE
CQNVNTLIRPDGKKKAYVRLTQNFDALEIANKIGII*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013025	Ribosomal_L25/23
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR019985	Ribosomal_L23
IPR001014	Ribosomal_L23/L25_CS
IPR012678	Ribosomal_L23/L15e_core_dom_sf