prot_H-paniculata_contig1698.3906.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1698.3906.1
Unique Nameprot_H-paniculata_contig1698.3906.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length611
Homology
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BLAST of mRNA_H-paniculata_contig1698.3906.1 vs. uniprot
Match: A0A6H5KXP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP0_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.770e-18
Identity = 86/235 (36.60%), Postives = 115/235 (48.94%), Query Frame = 0 
Query:  401 GVSVDLRWQVEALLARVEYLERRQQLSPDPTAAXXXXXXXXXXXXXXXXLLQSASDQHRRWMPAPLVLTPPPPMSRNSTKSGD-RVAMGISSTPFTGLDMLFRTPR-PQDMDQQQQQHISPP--TPPRGQTQWAPPPGPI------------SPRRSRLTWSAGEGEEAITARGGRVAPRT----PEEEQQRS-------DSPSDWRL-----SDVVSSGSSRDQNAAAAAGEGR 603
            G    L  QV++LLARVE+LE+++       +                                PL+LTPPP +  +    G+   A+G+S+TPFTGLD+LFRTP+ PQ+  ++  QH+  P  +P RG+T+WA P                SPRRSRLTW AG+G+EAI ARGGR  PR     P  +Q  S       D+   W L     SD+   G S  QNAA   G+GR
Sbjct:  275 GEKASLSQQVQSLLARVEFLEKQRSFEGAGVSCGGSGRAP------------------------PLILTPPPRLGGHRAAGGEGHHAVGVSTTPFTGLDVLFRTPKQPQESAERYTQHVVHPPLSPSRGKTRWAAPRVTSTDGDNSNIGQSESPRRSRLTWCAGDGQEAIEARGGRAPPRAQGEGPAVQQPPSPPLYSLGDARGKWALEARSPSDLGGDGRSLSQNAARGGGDGR 485
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BLAST of mRNA_H-paniculata_contig1698.3906.1 vs. uniprot
Match: D7FP16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP16_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.860e-14
Identity = 85/238 (35.71%), Postives = 106/238 (44.54%), Query Frame = 0 
Query:  398 NHSGVSVDLRWQVEALLARVEYLERRQQLSPDPTAAXXXXXXXXXXXXXXXXLLQSA--SDQHRRWMPAPLVLTPPPPMSRNSTKSGDRVAMGISSTPFTGLDMLFRTPR-PQDMDQQQQQH-ISPP-TPPRGQTQWAPPP------------GPISPRRSRLTWSAGEGEEAITARGGRVAPRT----PEEEQQRS-------DSPSDWRL-----SDVVSSGSSRDQNAAAAAGEG 602
            N  G    L  QVE+LLARVE+LE+++                          LQ                                   A+G+S+TPFTGLD+LFRTP+ PQ+  ++  QH I PP +P RG+T+WA P              P SPRRSRLTW AG+G+EAI ARGGR  PR     P  +Q  S       D+   W L     SD+   G S  QNAA   GEG
Sbjct:  293 NSDGEKASLSQQVESLLARVEFLEKQRSFEGAGVGCRGSGSLLNNRRGSEVGFLQEEHPGXXXXXXXXXXXXXXXXXXXXXXXXXGEGHHAVGVSTTPFTGLDVLFRTPKQPQESAERYSQHVIHPPLSPSRGKTRWAAPRVPPTDGGNSNVGHPESPRRSRLTWCAGDGQEAIEARGGRAPPRAQGEGPAVQQPPSPPLYSLGDARGKWALEARSPSDLGGDGRSLSQNAARDGGEG 530
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1698.3906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXP0_9PHAE2.770e-1836.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP16_ECTSI3.860e-1435.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1698contigH-paniculata_contig1698:6453..10440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1698.3906.1mRNA_H-paniculata_contig1698.3906.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1698 6453..14327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1698.3906.1 ID=prot_H-paniculata_contig1698.3906.1|Name=mRNA_H-paniculata_contig1698.3906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=611bp
MMVMNDNRAGVAQEVVEVGKTQEAQQQRCCSRHPEKENGVGDVVSANNNT
ENGRCGVIPDSWSRSTKERQARTPTTTVRPTIFPVSPSAAVCRTCGHKSS
DNGSVKDINTSNSSSLEAERDSLAPIAPVAVAQSKAPLLLPKAEVVENDQ
PSSRSHGGSTQAAAITSVLTSIPATEVSPANHEIAVNNADPSGHCRKRSD
EASSCIVDGGATSTAAAAEVGWGGKPHVAVTATTGSRVGDGRQIGVVLPG
NSSPKLESTGGRLAGKQHVKPLINDDRGGAGVLGDPGTVREGRSSSGVRS
GSAWQFERESCRGDGDCQAGAGAGARASQEGVLEVSRSFGKSGSKTEQFC
ASRASPKFFGSGSCEGVDSDVGDRRRRRDVTSQLVGRRQSGDDVATGNHS
GVSVDLRWQVEALLARVEYLERRQQLSPDPTAAAASMRRRHSYESKSGGL
LQSASDQHRRWMPAPLVLTPPPPMSRNSTKSGDRVAMGISSTPFTGLDML
FRTPRPQDMDQQQQQHISPPTPPRGQTQWAPPPGPISPRRSRLTWSAGEG
EEAITARGGRVAPRTPEEEQQRSDSPSDWRLSDVVSSGSSRDQNAAAAAG
EGRSQFATEHG
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