mRNA_H-paniculata_contig16977.3905.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig16977.3905.1
Unique NamemRNA_H-paniculata_contig16977.3905.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 1.590e-87
Identity = 138/317 (43.53%), Postives = 198/317 (62.46%), Query Frame = 1
Query:    1 PETLIAVVKSKNALSTAGNNGLRFSHLQCILNTSAGKEGSGPVFGSFWRRTMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYKPKLEEFNLLERQYGVA-SDGAELMGLRAKADHQLKHWLIALDCTNAFNSVKRVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQGNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLVLAMGELTKENSSTIRFLVQELACIGVHINNTKTKTVPPMNHTPTEREIAALAAMGIGVAKEGGQVIGTPIGTDAFIQ 948
            P+ L+ V+  +++ S AGN+G RFSHL+ I+N   G+E         WRR +  P+AFPPEFW L+ QS+L ALGEK RP+C+G T RR +AAG VR++KPKLEE      Q+GVA + G E + + A+  HQ  HW++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ M++G RR I    G+ QG+G+GP LF   + PI+ K + +++   V L AY+DD+ L    +T EN   I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +A+EG  V+G PIGTDA+++
Sbjct:   92 PQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVE 408          
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 2.330e-85
Identity = 139/312 (44.55%), Postives = 200/312 (64.10%), Query Frame = 1
Query:   19 VVKSKNALSTAGNNGLRFSHLQCILNTSAGKEGSGPVFGSFWRRTMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYKPKLEEFNLLERQYGVA-SDGAELMGLRAKADHQLKHWLIALDCTNAFNSVKRVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQGNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLV-LAMGELTKENSSTIRFLVQELACIGVHINNTKTKTVPPMNHTPTEREIAALAAMGIGVAKEGGQVIGTPIGTDAFIQ 948
            V+ S+++ S AGN+G RFSHL+ I+NT  G+E       S WRR +  P+AFPPEFW L+ QS+L ALGEK RP+C+G T RR +AAG VR++KPKLEE      Q+GVA + G E + + A+  HQ  HW++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ M++G+RR I   +G+ QG+G+GP LF   + PI+ K + +++   V L AY+DD++ L    +T EN   I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +A+EG  V+G PIGTDA+++
Sbjct:    7 VINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVE 318          
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 1.150e-84
Identity = 142/319 (44.51%), Postives = 204/319 (63.95%), Query Frame = 1
Query:    1 PETLIAVVKSKNALSTAGNNGLRFSHLQCILNTSAGKEGSGPVFGSFWRRTMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYKPKLEEFNLLERQYGVA-SDGAELMGLRAKADHQLKHWLIALDCTNAFNSVKRVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQGNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLVLAMGELTKENSSTIRFLVQELACIGVHINNTKTKTVPPMNH--TPTEREIAALAAMGIGVAKEGGQVIGTPIGTDAFIQ 948
            P+ L+ VV  +++ S AGN+G RFSHL+ I+NT  G+E       S WRR ++ P AFPPEFW L  QS+L ALGEK RP+C+G T RR +AAG VR++KPKLEE      Q+GVA + G E + + A+  HQ  HW++  DC+NAFN+ KR AI+ + +   P L  ++A+CY E PA  I+ M++G+RR I   +G+ QG+G+GP LF   + PI+ K + +++   V L AY+DD+ L   ++T EN      LV EL  +G+ +N  K+  +PP  H  TPTER    L   G+ +A+EG  V+G PIGTDA+++
Sbjct:  369 PQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERR--PLGDAGLPIAEEGITVVGVPIGTDAYVE 685          
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 5.460e-84
Identity = 141/317 (44.48%), Postives = 203/317 (64.04%), Query Frame = 1
Query:    1 PETLIAVVKSKNALSTAGNNGLRFSHLQCILNTSAGKEGSGPVFGSFWRRTMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYKPKLEEFNLLERQYGVA-SDGAELMGLRAKADHQLKHWLIALDCTNAFNSVKRVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQGNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLVLAMGELTKENSSTIRFLVQELACIGVHINNTKTKTVPPMNHTPTEREIAALAAMGIGVAKEGGQVIGTPIGTDAFIQ 948
            P+ L+ V+ S+++ S AGN+G RFSHL+ I+NT  G+E       S WRR +  P+AFPPEFW L+ QS+L ALGEK RP+C+G T RR +AAG VR++KPKLEE      Q+GVA + G E + + A+  HQ  HW++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ M++G+RR I   +G+ QG+G+GP LF   + PI+ K + +++   V L AY+DD+ L    +T EN   I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +A+EG  V+G PIGTDA+++
Sbjct:  370 PQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVE 686          
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 1.090e-83
Identity = 139/317 (43.85%), Postives = 207/317 (65.30%), Query Frame = 1
Query:    1 PETLIAVVKSKNALSTAGNNGLRFSHLQCILNTSAGKEGSGPVFGSFWRRTMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYKPKLEEFNLLERQYGVA-SDGAELMGLRAKADHQLKHWLIALDCTNAFNSVKRVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQGNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLVLAMGELTKENSSTIRFLVQELACIGVHINNTKTKTVPPMNHTPTEREIAALAAMGIGVAKEGGQVIGTPIGTDAFIQ 948
            P+ LI V+ S+++ S AGN+G RFSHL+ I NT  G+E       S WRR +  P+ FPPEFW L+ QS+L ALGEK RP+C+G T RR +AAG VRQ+KPKLEE      Q+GVA + G E + + A+  HQ  +W+I  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  ++ M++G+RR +   +G+ QG+G+GP LF + + PI+ K Q++++   V   AY+DD+ L + +LT+E+   +  LV ELA +G+ +N  K+  +PP  H  T+++   L  +G+ VA EG  V+G PIGTD +++
Sbjct:  540 PQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPPPGHMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVR 856          
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 1.480e-82
Identity = 138/317 (43.53%), Postives = 200/317 (63.09%), Query Frame = 1
Query:    1 PETLIAVVKSKNALSTAGNNGLRFSHLQCILNTSAGKEGSGPVFGSFWRRTMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYKPKLEEFNLLERQYGVA-SDGAELMGLRAKADHQLKHWLIALDCTNAFNSVKRVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQGNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLVLAMGELTKENSSTIRFLVQELACIGVHINNTKTKTVPPMNHTPTEREIAALAAMGIGVAKEGGQVIGTPIGTDAFIQ 948
            P+ L+ V+ S+++ S AGN+G RFSHL+ I+NT  G+E       S WRR +  P+AFPPEFW L+ QS+L ALGEK RP+C+G T RR +AAG VR++KPKLEE      Q+GVA + G E + + A+  HQ  HW++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ M++G+RR I   +G+ QG+G+GP LF   + PI+ K + +++   V L AY+DD+ L    +T EN   I  LV EL  +G+ +N  K+  + P        E   L   G+ +A+EG  V+G PIGTDA+++
Sbjct:  391 PQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVE 707          
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 4.590e-76
Identity = 123/284 (43.31%), Postives = 178/284 (62.68%), Query Frame = 1
Query:    1 PETLIAVVKSKNALSTAGNNGLRFSHLQCILNTSAGKEGSGPVFGSFWRRTMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYKPKLEEFNLLERQYGVA-SDGAELMGLRAKADHQLKHWLIALDCTNAFNSVKRVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQGNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLVLAMGELTKENSSTIRFLVQELACIGVHINNTKTKTVPPMNHTPT 849
            P+ L+ V+ S+++ S AGN+G RFSHL+ I+NT  G+E       S WRR +  P+AFPPEFW L+ QS+L ALGEK RP+C+G T RR +AAG VR++KPKLEE      Q+GVA + G E + + A+   Q  HW++  DC+N  N+ KR AI+ + A   P L   +A+CY E PA  I+ M++G+RR I   +G+ QG+G+GP LF   + PI+ K + +++   V L AY+DD+ L    +T E+   I  LV EL  +G+ +N  K+  +PP  H  T
Sbjct:   47 PQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVT 329          
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 2.410e-75
Identity = 122/272 (44.85%), Postives = 174/272 (63.97%), Query Frame = 1
Query:  136 SFWRRTMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYKPKLEEFNLLERQYGVA-SDGAELMGLRAKADHQLKHWLIALDCTNAFNSVKRVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQGNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLVLAMGELTKENSSTIRFLVQELACIGVHINNTKTKTVPPMNHTPTEREIAALAAMGIGVAKEGGQVIGTPIGTDAFIQ 948
            S WRR +  P+AFPPEFW L+ QS+L ALGEK RP+C+G T RR +AAG VR++KPKLEE      Q+GVA + G E + + A+  HQ  HW++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E  A  I+ M++G+RR I   +G+ QG+G+GP LFF  + PI+ K + +++   V L AY+DD+ L    +T EN   I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +A+EG  V+G PIGTDA+++
Sbjct:    3 SLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVE 274          
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 2.080e-72
Identity = 113/249 (45.38%), Postives = 163/249 (65.46%), Query Frame = 1
Query:    4 ETLIAVVKSKNALSTAGNNGLRFSHLQCILNTSAGKEGSGPVFGSFWRRTMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYKPKLEEFNLLERQYGVA-SDGAELMGLRAKADHQLKHWLIALDCTNAFNSVKRVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQGNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLVLAMGELTKEN 747
            + L+ V  S+++ S AGN+G RFSHL+ I+NT  G+E       S WRR +  P+AFPPEFW L+ +S+L ALGEK RP+C+G T RR +AAG VR++KPKLEE      Q+GVA + G E + + A+  HQ  HW++  DC+NAFN+ KR AI+ + A   P L  ++A+CY E PA  I+ M++G+RR I   +G+ QG+G+GP LF   + PI+ K + +++   V L AY+DD+ L    +T EN
Sbjct:    3 QVLLQVTNSRSSNSGAGNDGQRFSHLKSIVNTKTGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKRSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEN 251          
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 9.490e-72
Identity = 138/373 (37.00%), Postives = 199/373 (53.35%), Query Frame = 1
Query:    1 PETLIAVVKSKNALSTAGNNGLRFSHLQC-ILNTSAGKEGSGPVFGSFWRRTMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYKPKLEEFNLLERQYGVASDGA-ELMGLRAKADHQLKHWLIALDCTN-------------------------------------------------------AFNSVKRVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQGNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLVLAMGELTKENSSTIRFLVQELACIGVHINNTKTKTVPPMNHTPTEREIAALAAMGIGVAKEGGQVIGTPIGTDAFIQ 948
            P+ L+ V+ S+++ S AGN+G  FSHL   I+NT  G+E       S WRR +  P+AFPPEFW L+ QS+L ALGEK RP+C+G T RR +AAG VR++KPKLEE      Q+GVA+ G  E + + A+  HQ  HW++  DC+N                                                       AFN+ KR AI+ + A   P L  ++A+CY E PA  I+ M++G+RR I   +G+ QG+G+GP LF   + PI+ K + +++   V L AY+DD+ L    +T E    I  LV EL  +G+ +N  K+  +PP  H  T  E   L   G+ +A+EG  V+G PI TDA+++
Sbjct:  340 PQVLLQVINSRSSNSGAGNDGQCFSHLNXSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIETDAYVE 712          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16977.3905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR59_9PHAE1.590e-8743.53Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LL14_9PHAE2.330e-8544.55Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKQ2_9PHAE1.150e-8444.51Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE5.460e-8444.48Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE1.090e-8343.85Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE1.480e-8243.53Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KT19_9PHAE4.590e-7643.31Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDD0_9PHAE2.410e-7544.85Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L4Y4_9PHAE2.080e-7245.38Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE9.490e-7237.00Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16977contigH-paniculata_contig16977:1113..2060 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score98.6
Seed ortholog evalue5.5e-18
Seed eggNOG ortholog400682.PAC_15701845
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs39QPF@33154,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Exons1
Model size948
Cds size948
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929342.915475-CDS-H-paniculata_contig16977:1112..20601622929342.915475-CDS-H-paniculata_contig16977:1112..2060Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16977 1113..2060 -
1691480822.795417-CDS-H-paniculata_contig16977:1112..20601691480822.795417-CDS-H-paniculata_contig16977:1112..2060Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig16977 1113..2060 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16977.3905.1prot_H-paniculata_contig16977.3905.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig16977 1113..2060 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig16977.3905.1

>prot_H-paniculata_contig16977.3905.1 ID=prot_H-paniculata_contig16977.3905.1|Name=mRNA_H-paniculata_contig16977.3905.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp
PETLIAVVKSKNALSTAGNNGLRFSHLQCILNTSAGKEGSGPVFGSFWRR
TMEQPDAFPPEFWELFLQSNLKALGEKSRPICVGSTMRRTLAAGVVRQYK
PKLEEFNLLERQYGVASDGAELMGLRAKADHQLKHWLIALDCTNAFNSVK
RVAILEEVAIRTPGLTPFVAKCYGEKPANIIFRMNTGQRRRISSNAGIHQ
GNGLGPTLFFIPVEPILRKSQEQFEAPWVELLAYLDDLVLAMGELTKENS
STIRFLVQELACIGVHINNTKTKTVPPMNHTPTEREIAALAAMGIGVAKE
GGQVIGTPIGTDAFIQ
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mRNA from alignment at H-paniculata_contig16977:1113..2060-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig16977.3905.1 ID=mRNA_H-paniculata_contig16977.3905.1|Name=mRNA_H-paniculata_contig16977.3905.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=948bp|location=Sequence derived from alignment at H-paniculata_contig16977:1113..2060- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCGAAACCCTGATAGCGGTTGTGAAGTCGAAGAACGCCCTCTCCACGGC GGGTAACAATGGCCTGCGTTTCTCCCATCTGCAGTGCATCCTGAACACCT CGGCGGGTAAGGAAGGTTCTGGCCCCGTATTCGGGTCTTTCTGGCGGCGC ACCATGGAACAACCGGACGCCTTCCCGCCGGAGTTCTGGGAGCTGTTCCT CCAAAGCAACCTCAAGGCGCTCGGGGAGAAGTCCCGCCCGATCTGTGTAG GATCTACGATGCGGCGTACTTTGGCCGCTGGGGTGGTCAGGCAATACAAG CCGAAACTGGAGGAGTTTAACCTGTTGGAGCGGCAATACGGAGTAGCCTC GGACGGCGCGGAGCTCATGGGTCTCCGTGCGAAAGCAGACCACCAGCTGA AGCATTGGCTTATCGCCCTCGACTGTACCAATGCATTCAACTCCGTCAAG CGGGTGGCGATCTTGGAAGAAGTTGCAATCCGCACCCCGGGACTAACACC TTTCGTAGCCAAATGCTACGGGGAGAAGCCGGCAAATATCATTTTCCGGA TGAACACCGGGCAACGCAGGAGAATATCCTCGAATGCGGGAATCCACCAG GGCAACGGACTGGGACCCACCCTCTTCTTCATTCCCGTGGAACCAATCTT GCGCAAGTCCCAAGAACAATTCGAGGCTCCGTGGGTAGAACTATTGGCCT ACCTGGACGATCTGGTGCTGGCAATGGGGGAGCTGACAAAAGAAAACTCA TCGACGATCCGTTTCCTCGTGCAAGAGCTAGCATGCATAGGAGTGCACAT TAACAACACCAAGACGAAGACGGTGCCCCCAATGAACCACACCCCCACCG AAAGGGAGATCGCTGCGCTGGCGGCGATGGGCATCGGCGTTGCAAAGGAA GGGGGACAGGTGATTGGTACACCGATTGGGACCGACGCATTCATTCAG
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Coding sequence (CDS) from alignment at H-paniculata_contig16977:1113..2060-

>mRNA_H-paniculata_contig16977.3905.1 ID=mRNA_H-paniculata_contig16977.3905.1|Name=mRNA_H-paniculata_contig16977.3905.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1896bp|location=Sequence derived from alignment at H-paniculata_contig16977:1113..2060- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCGAAACCCTGATAGCGGTTGTGAAGTCGAAGAACGCCCTCTCCACGGC
GGGTAACAATGGCCTGCGTTTCTCCCATCTGCAGTGCATCCTGAACACCT
CGGCGGGTAAGGAAGGTTCTGGCCCCGTATTCGGGTCTTTCTGGCGGCGC
ACCATGGAACAACCGGACGCCTTCCCGCCGGAGTTCTGGGAGCTGTTCCT
CCAAAGCAACCTCAAGGCGCTCGGGGAGAAGTCCCGCCCGATCTGTGTAG
GATCTACGATGCGGCGTACTTTGGCCGCTGGGGTGGTCAGGCAATACAAG
CCGAAACTGGAGGAGTTTAACCTGTTGGAGCGGCAATACGGAGTAGCCTC
GGACGGCGCGGAGCTCATGGGTCTCCGTGCGAAAGCAGACCACCAGCTGA
AGCATTGGCTTATCGCCCTCGACTGTACCAATGCATTCAACTCCGTCAAG
CGGGTGGCGATCTTGGAAGAAGTTGCAATCCGCACCCCGGGACTAACACC
TTTCGTAGCCAAATGCTACGGGGAGAAGCCGGCAAATATCATTTTCCGGA
TGAACACCGGGCAACGCAGGAGAATATCCTCGAATGCGGGAATCCACCAG
GGCAACGGACTGGGACCCACCCTCTTCTTCATTCCCGTGGAACCAATCTT
GCGCAAGTCCCAAGAACAATTCGAGGCTCCGTGGGTAGAACTATTGGCCT
ACCTGGACGATCTGGTGCTGGCAATGGGGGAGCTGACAAAAGAAAACTCA
TCGACGATCCGTTTCCTCGTGCAAGAGCTAGCATGCATAGGAGTGCACAT
TAACAACACCAAGACGAAGACGGTGCCCCCAATGAACCACACCCCCACCG
AAAGGGAGATCGCTGCGCTGGCGGCGATGGGCATCGGCGTTGCAAAGGAA
GGGGGACAGGTGATTGGTACACCGATTGGGACCGACGCATTCATTCAGCC
CGAAACCCTGATAGCGGTTGTGAAGTCGAAGAACGCCCTCTCCACGGCGG
GTAACAATGGCCTGCGTTTCTCCCATCTGCAGTGCATCCTGAACACCTCG
GCGGGTAAGGAAGGTTCTGGCCCCGTATTCGGGTCTTTCTGGCGGCGCAC
CATGGAACAACCGGACGCCTTCCCGCCGGAGTTCTGGGAGCTGTTCCTCC
AAAGCAACCTCAAGGCGCTCGGGGAGAAGTCCCGCCCGATCTGTGTAGGA
TCTACGATGCGGCGTACTTTGGCCGCTGGGGTGGTCAGGCAATACAAGCC
GAAACTGGAGGAGTTTAACCTGTTGGAGCGGCAATACGGAGTAGCCTCGG
ACGGCGCGGAGCTCATGGGTCTCCGTGCGAAAGCAGACCACCAGCTGAAG
CATTGGCTTATCGCCCTCGACTGTACCAATGCATTCAACTCCGTCAAGCG
GGTGGCGATCTTGGAAGAAGTTGCAATCCGCACCCCGGGACTAACACCTT
TCGTAGCCAAATGCTACGGGGAGAAGCCGGCAAATATCATTTTCCGGATG
AACACCGGGCAACGCAGGAGAATATCCTCGAATGCGGGAATCCACCAGGG
CAACGGACTGGGACCCACCCTCTTCTTCATTCCCGTGGAACCAATCTTGC
GCAAGTCCCAAGAACAATTCGAGGCTCCGTGGGTAGAACTATTGGCCTAC
CTGGACGATCTGGTGCTGGCAATGGGGGAGCTGACAAAAGAAAACTCATC
GACGATCCGTTTCCTCGTGCAAGAGCTAGCATGCATAGGAGTGCACATTA
ACAACACCAAGACGAAGACGGTGCCCCCAATGAACCACACCCCCACCGAA
AGGGAGATCGCTGCGCTGGCGGCGATGGGCATCGGCGTTGCAAAGGAAGG
GGGACAGGTGATTGGTACACCGATTGGGACCGACGCATTCATTCAG
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