mRNA_H-paniculata_contig16976.3904.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 196 bits (497), Expect = 5.310e-52 Identity = 115/361 (31.86%), Postives = 193/361 (53.46%), Query Frame = 1
Query: 1 LPAWRKAIRKKWIFKRKLKEDGRMATYKARLVAQEFSQVKGEELFKTSAPAARISTLRTV*KLAAEHDFE*EGWT*MRRI*TPR*KNYCL*RYPRGFPLSRDIPFVRRLRQSLYDFKQSGRKWNDTLDDFLVGIGLDRFTTNPYLYFSRGDGGETDILVLVYVDDLIIAGRR-EKVNEFKHKLSGLFRIEDLGSLSRVLGVRVRRD-----CPDGSYIREVLKIHGFDKCRSVPTPPPETKPLGAVLSDIGAGIYESNCKRSANSTEYRGMVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDLGHTFGDKSNGHGLEGFVDADWAGNVED*KSTTRHVFKLNG 1065
LP RKA+ KW+FK K DG + +KARLVAQ FSQ G + +T +P R ++RTV L+ + + ++ + P GF + +L +SLY KQS R WN LD+ L IG + ++P +Y DG +V ++VDD+I+AG+ EK+ + K ++ F+++D+G L +LG++V ++ +Y ++K +G + C+ V TP + L + + D + ++ N E++ V S +Y S+ TRPD+ +AV+ A+ NP+ E ++ + I+RYL + G + + +N + GF DADWAG++ D KST+ + F++NG
Sbjct: 183 LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMED--SELF--------NKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQING 530
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 199 bits (505), Expect = 1.060e-51 Identity = 119/362 (32.87%), Postives = 195/362 (53.87%), Query Frame = 1
Query: 1 LPAWRKAIRKKWIFKRKLKEDGRMATYKARLVAQEFSQVKGEELFKTSAPAARISTLRTV*KLAAEHDFE*EGWT*MRRI*TPR*KNYCL*RYPRGFPLSRDIPFVRRLRQSLYDFKQSGRKWNDTLDDFLVGIGLDRFTTNPYLYFSRGDGGETDILVL-VYVDDLIIAGRR-EKVNEFKHKLSGLFRIEDLGSLSRVLGVRVRRD-----CPDGSYIREVLKIHGFDKCRSVPTPPPETKPLGAVLSDIGAGIYESNCKRSANSTEYRGMVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDLGHTFGDKSNGHGLEGFVDADWAGNVED*KSTTRHVFKLNG 1065
LP RKA+ KW+FK K DG + +KARLVAQ FSQ G + +T +P R +RTV L+ + + ++ + P GF + V +L +SLY KQS R WN LD+ L IG + ++P +Y DG DI V+ ++VDD+I+AG+ EK+ + K ++ F+++D+G L +LG++V ++ +Y ++K +G + C+ V TP + L + + D + ++ N EY+ V S +Y S+ TRPD+ +AV+ A+ NP+ E ++ + I+RYL + G + + +N + GF DADWAG++ D KST+ + F++NG
Sbjct: 797 LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDG---DIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIED--SELF--------NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQING 1144
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 194 bits (494), Expect = 2.330e-51 Identity = 125/363 (34.44%), Postives = 186/363 (51.24%), Query Frame = 1
Query: 1 LPAWRKAIRKKWIFKRKLKEDGRMATYKARLVAQEFSQVKGEELFKTSAPAARISTLRTV*KLAAEHDFE*EGWT*MRRI*TPR*KNYCL*RYPRGFPLSRDIPFVRRLRQSLYDFKQSGRKWNDTLDDFLVGIGLDRFTTNPYLYFSRGDGGETDILVLVYVDDLIIAGRRE-KVNEFKHKLSGLFRIEDLGSLSRVLGVRVRRDCPDG--------SYIREVLKIHGFDKCRSVPTPPPETKPLGAVLSDIGAGIYESNCKRSANSTEYRGMVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDLGHTFGDKSNGHGLEGFVDADWAGNVED*KSTTRHVFKLN 1062
LP RKA+ KW+F+ K DG + T+KARLVAQ FSQ G++ +T +P AR ++RTV LAA+H + K + GF V RLR+S+Y KQS R WN LD L +G + T +P +Y +GGE ++ VYVDD+++AG+ + K+NE K L+ F+++D+G L LGV+V PD +Y + VL+ G + + TP L D + + Y+ V +Y ST TRPD+AYAV AR +P+ E + + I RYL+ D+G + G+ DADWAG+++D KST+ +VF+++
Sbjct: 19 LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKEHLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKE-EGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPK-PDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADD----------SQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQIS 368
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 192 bits (489), Expect = 5.760e-51 Identity = 124/363 (34.16%), Postives = 186/363 (51.24%), Query Frame = 1
Query: 1 LPAWRKAIRKKWIFKRKLKEDGRMATYKARLVAQEFSQVKGEELFKTSAPAARISTLRTV*KLAAEHDFE*EGWT*MRRI*TPR*KNYCL*RYPRGFPLSRDIPFVRRLRQSLYDFKQSGRKWNDTLDDFLVGIGLDRFTTNPYLYFSRGDGGETDILVLVYVDDLIIAGRRE-KVNEFKHKLSGLFRIEDLGSLSRVLGVRVRRDCPDG--------SYIREVLKIHGFDKCRSVPTPPPETKPLGAVLSDIGAGIYESNCKRSANSTEYRGMVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDLGHTFGDKSNGHGLEGFVDADWAGNVED*KSTTRHVFKLN 1062
LP RKA+ KW+F+ K DG + T+KARLVAQ FSQ G++ +T +P AR ++RTV LAA+H + K + P GF V RLR+S+ KQS R WN LD L +G + T +P +Y +GGE ++ VYVDD+++AG+ + K+NE K L+ F+++D+G LGV+V + PD +Y + VL+ G + + TP L D + + Y+ V +Y ST TRPD+AYAV AR +P+ E + + I RYL+ D+G + G+ DADWAG+++D KST+ +VF+++
Sbjct: 167 LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKEHLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKE-EGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQK-PDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADD----------SQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQIS 516
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Match: A0A5S6QJX2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QJX2_TRIMR) HSP 1 Score: 188 bits (478), Expect = 1.410e-50 Identity = 128/362 (35.36%), Postives = 188/362 (51.93%), Query Frame = 1
Query: 1 LPAWRKAIRKKWIFKRKLKEDGRMATYKARLVAQEFSQVKGEELFKTSAPAARISTLRTV*KLAAEHDFE*EGWT*MRRI*TPR*KNYCL*RYPRGFPLSRDIPFVRRLRQSLYDFKQSGRKWNDTLDDFLVGIGLDRFTTNPYLYFSRGDGGETDILVLVYVDDLIIAGRREKVN-EFKHKLSGLFRIEDLGSLSRVLGVRVRRDCPDGSY-------IREVLKIHGFDKCRSVPTPPPETKPLGAVLSDIGAGIYESNCKRSANSTEYRGMVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDLGHTFGDKSNGH-GLEGFVDADWAGNVED*KSTTRHVFKL 1059
LP ++ I KW+FK K + G + TYKARLVA+ FSQ++G + KT AP R T+R + + A + + P GF V RLR+SLY KQS R WN D L +G +P L FSR + T VL+YVDDL+IAG ++ + +L+ F I+DLG + + LG++V R+ DGS+ +R +LK HG + V TP + ++ + E + K N+ EYR + S +Y +T TRPD+++AV Q R M++P++ D+ + + RYL+ P F +NG L GFVDADWAG+ D KST+ + FK+
Sbjct: 14 LPPGKRTISAKWVFKAKRDDQGNIHTYKARLVARGFSQIQGRDYDKTFAPVVRHETVRILFAVVAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTGGKVLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCL-FSRSEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVERE-EDGSFLLYQAAKVRHLLKEHGLLDAKPVATP---------MEANFLSSTEEESPKLPDNA-EYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRF--SANGSIKLSGFVDADWAGDQADRKSTSGYAFKV 361
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Match: A0A5S6QN85_TRIMR (Integrase catalytic domain-containing protein n=2 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QN85_TRIMR) HSP 1 Score: 188 bits (478), Expect = 1.720e-48 Identity = 128/362 (35.36%), Postives = 189/362 (52.21%), Query Frame = 1
Query: 1 LPAWRKAIRKKWIFKRKLKEDGRMATYKARLVAQEFSQVKGEELFKTSAPAARISTLRTV*KLAAEHDFE*EGWT*MRRI*TPR*KNYCL*RYPRGFPLSRDIPFVRRLRQSLYDFKQSGRKWNDTLDDFLVGIGLDRFTTNPYLYFSRGDGGETDILVLVYVDDLIIAGRREKVN-EFKHKLSGLFRIEDLGSLSRVLGVRVRRDCPDGSY-------IREVLKIHGFDKCRSVPTPPPETKPLGAVLSDIGAGIYESNCKRSANSTEYRGMVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDLGHTFGDKSNGH-GLEGFVDADWAGNVED*KSTTRHVFKL 1059
LP ++ I KW+FK K + G + TYKARLVA+ FSQ++G + +T AP R T+R + +AA + + P GF V RLR+SLY KQS R WN D L +G +P L FSR + T VL+YVDDL+IAG ++ + +L+ F I+DLG + + LG++V R+ DGS+ +R +LK HG + V TP + ++ + E + K N+ EYR + S +Y +T TRPD+++AV Q R M++P++ D+ + + RYL+ P F +NG L GFVDADWAG+ D KST+ + FK+
Sbjct: 394 LPPGKRTISAKWVFKAKRDDQGNIHTYKARLVARGFSQIQGRDYDETFAPVVRHETVRILFAVAAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTDGKVLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCL-FSRNEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVERE-EDGSFLLYQAAKVRHLLKEHGLLDAKPVATP---------MEANFLSSTEEESPKLPDNA-EYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRF--SANGSIKLSGFVDADWAGDHADRKSTSGYAFKV 741
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Match: Q8MRT6_DROME (SD26211p n=1 Tax=Drosophila melanogaster TaxID=7227 RepID=Q8MRT6_DROME) HSP 1 Score: 185 bits (470), Expect = 6.280e-48 Identity = 124/363 (34.16%), Postives = 186/363 (51.24%), Query Frame = 1
Query: 1 LPAWRKAIRKKWIFKRKLKEDGRMATYKARLVAQEFSQVKGEELFKTSAPAARISTLRTV*KLAAEHDFE*EGWT*MRRI*TPR*KNYCL*RYPRGFPLSRDIPFVRRLRQSLYDFKQSGRKWNDTLDDFLVGIGLDRFTTNPYLYFSRGDGGETDILVLVYVDDLIIAGR-REKVNEFKHKLSGLFRIEDLGSLSRVLGVRVRRDCPDGS-------YIREVLKIHGFDKCRSVPTPPPETKPLGAVLSDIGAGIYESNCKRSANSTEYRGMVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDLGHTFGDKSNGHGLEGFVDADWAGNVED*KSTTRHVFKLNG 1065
LP R+ + KW++ K GR+ +KARLVA+ SQ G + F+T +P R+ ++R + LAAE K+ + P+GF + + V LR+++Y KQSGR+WN LD L +G P LY G G +L+LVYVDDLI+A + RE + + K K+S F D G L LG+ V+RD G YI+E+L+ +G + CR P T PL A + AG C++ ++ +Y+ + M+ TRPD+ ++V + A+R K+P E + I RYL++ D+ + + G GFVDADW G+ D KS T +VF L+G
Sbjct: 240 LPRNRRCVACKWVYSLKRDVSGRIERFKARLVAKGCSQKFGVDYFETFSPVCRLESVRLILALAAEMQLYLHHMDVCTAYLNSELKDTVYMKQPQGFTDAANPDQVLLLRKAIYGLKQSGREWNSKLDGVLKDLGFKACNHEPCLYQQSGQGNL--MLILVYVDDLILACQSREDMEDLKAKISESFECTDKGPLHLFLGMEVQRDGDLGEITLGHSQYIKELLRAYGSENCR------PATTPLDAGHQVLCAG---EQCQK-VDAGQYQSTIGELMWLGLTTRPDILHSVAKLAQRNKDPHSEHMVAVKHILRYLASTVDVKLHY--QKCGQAFTGFVDADWGGDRLDRKSYTGYVFFLSG 588
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME) HSP 1 Score: 185 bits (470), Expect = 8.630e-48 Identity = 118/381 (30.97%), Postives = 194/381 (50.92%), Query Frame = 1
Query: 1 LPAWRKAIRKKWIFKRKLKEDGRMATYKARLVAQEFSQVKGEELFKTSAPAARISTLRTV*KLAAEHDFE*EGWT*MRRI*TPR*KNYCL*RYPRGFPLSRDIPFVRRLRQSLYDFKQSGRKWNDTLDDFLVGIGLDRFTTNPYLYFSRGDGGETDILVLVYVDDLIIAGRREKVNE-FKHKLSGLFRIEDLGSLSRVLGVRVRRD-------CPDGSYIREVLKIHGFDKCRSVPTPPPETKPLGAVLSDIGAGIYESNCKRSANSTEYRGMVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDLGHTFGDKSNGHGLEGFVDADWAGNVED*KSTTRHVFKLNGPVAPGSNS*SRDIVQRQT 1119
LP ++AI KW+FK K +G + YKARLV + SQ +G + +T +P R ++LR + +AA+HD + + + P G+ S + V RL +SLY KQ+ + WND L++ L+ +GL R + +YF + + + V +YVDD+++ +K + K++LS +++D+GS S VLG+RV+RD YI VLK G D C +V TP ++ L D+ E K+ Y V S +Y + TRPD+++AV+ +R +NP + + + + RYL + G F + + L G+ DADWAG+++ +ST+ +VF + G S+ R + T
Sbjct: 270 LPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGY--SDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE--YSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKL---TLDMCPKSEEE--KKEMEKVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVF--RKSAQSLTGYCDADWAGDLDQRRSTSGYVFIMQGAAISWSSHRQRTVALSST 639
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Match: V9H104_DROME (Drosophila melanogaster retrotransposon 1731 sequence n=1 Tax=Drosophila melanogaster TaxID=7227 RepID=V9H104_DROME) HSP 1 Score: 184 bits (468), Expect = 5.820e-47 Identity = 124/363 (34.16%), Postives = 186/363 (51.24%), Query Frame = 1
Query: 1 LPAWRKAIRKKWIFKRKLKEDGRMATYKARLVAQEFSQVKGEELFKTSAPAARISTLRTV*KLAAEHDFE*EGWT*MRRI*TPR*KNYCL*RYPRGFPLSRDIPFVRRLRQSLYDFKQSGRKWNDTLDDFLVGIGLDRFTTNPYLYFSRGDGGETDILVLVYVDDLIIAGR-REKVNEFKHKLSGLFRIEDLGSLSRVLGVRVRRDCPDGS-------YIREVLKIHGFDKCRSVPTPPPETKPLGAVLSDIGAGIYESNCKRSANSTEYRGMVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDLGHTFGDKSNGHGLEGFVDADWAGNVED*KSTTRHVFKLNG 1065
LP R+ + KW++ K GR+ +KARLVA+ SQ G + F+T +P R+ ++R + LAAE K+ + P+GF + + V LR+++Y KQSGR+WN LD L +G P LY G G +L+LVYVDDLI+A + RE + + K K+S F D G L LG+ V+RD G YI+E+L+ +G + CR P T PL A + AG C++ ++ +Y+ + M+ TRPDM ++V + A+R ++P E + I RYL++ D+ + + G GFVDADW G+ D KS T +VF L+G
Sbjct: 552 LPRNRRCVACKWVYSLKRDVSGRIERFKARLVAKGCSQKFGVDYFETFSPVCRLESVRLILALAAEMQLYLHHMDVCTAYLNSELKDTVYMKQPQGFTDAANPDQVLLLRKAIYGLKQSGREWNSKLDGVLKDLGFKACNHEPCLYQQSGQGNL--MLILVYVDDLILACQSREDMEDLKAKISESFECTDKGPLHLFLGMEVQRDGDLGEITLGHSQYIKELLRDYGSENCR------PATTPLDAGHQVLCAG---EQCQK-VDAGQYQSTIGELMWLGLTTRPDMLHSVAKLAQRNQDPHSEHMVAVKHILRYLASTVDVKLHY--QKCGQAFTGFVDADWGGDRLDRKSYTGYVFFLSG 900
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI) HSP 1 Score: 184 bits (467), Expect = 1.040e-46 Identity = 119/361 (32.96%), Postives = 186/361 (51.52%), Query Frame = 1
Query: 1 LPAWRKAIRKKWIFKRKLKEDGRMATYKARLVAQEFSQVKGEELFKTSAPAARISTLRTV*KLAAEHDFE*EGWT*MRRI*TPR*KNYCL*RYPRGFPLSRDIPFVRRLRQSLYDFKQSGRKWNDTLDDFLVGIGLDRFTTNPYLYFSRGDGGETDILVLVYVDDLIIAGRRE-KVNEFKHKLSGLFRIEDLGSLSRVLGVRVRRDCPDGS-------YIREVLKIHGFDKCRSVPTPPPETKPLGAVLSDIGAGIYESNCKRSANSTEYRGMVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDLGHTFGDKSNGHGLEGFVDADWAGNVED*KSTTRHVFKL 1059
LP RK + KW+FK K G + YKARLVAQ FSQ +G + + T +P A+++TLRT+ +A + ++ + P G + D+ F +L +SLY KQ+ + W++ D+++ +GL++ ++ LY + I +L+YVDD+IIAG K+ E K L F +ED G L+ LG+++ D G Y+ +VLK D C ++ TP + S + I E N K+ N YR +V S MY G+RPD++YA++ R P+ ++ + + RY+ + G F +SN L GFVDADWA + D KSTT ++FK+
Sbjct: 808 LPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQPEGLNYNSDMIF--KLNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTP---------IESKLN--IEEDN-KQECNQP-YRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKV 1153 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16976.3904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig16976.3904.1 >prot_H-paniculata_contig16976.3904.1 ID=prot_H-paniculata_contig16976.3904.1|Name=mRNA_H-paniculata_contig16976.3904.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp MVKSFMYTSTGTRPDMAYAVHQAARRMKNPSREDFSKCECIYRYLSTVPDback to top mRNA from alignment at H-paniculata_contig16976:855..2339- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig16976.3904.1 ID=mRNA_H-paniculata_contig16976.3904.1|Name=mRNA_H-paniculata_contig16976.3904.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1485bp|location=Sequence derived from alignment at H-paniculata_contig16976:855..2339- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig16976:855..2339- >mRNA_H-paniculata_contig16976.3904.1 ID=mRNA_H-paniculata_contig16976.3904.1|Name=mRNA_H-paniculata_contig16976.3904.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at H-paniculata_contig16976:855..2339- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |