prot_H-paniculata_contig16966.3901.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16966.3901.1
Unique Nameprot_H-paniculata_contig16966.3901.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length177
Homology
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Match: A0A6H5JJ68_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ68_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 1.660e-96
Identity = 138/181 (76.24%), Postives = 156/181 (86.19%), Query Frame = 0
Query:    1 MNYTEHRCLNVENFDVVNDR--WTINTSPWSTPRECWWPIDHEDERLCTSTSGN--HKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGIIQGEEWSTERLMANGTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQVKDAHLPILGDVFFIILILWGSFFTLNLLLAVLEGNFT 177
            MNY ++RCL+V NFDVV+D   WT +TSPW+TPRECWWPID EDERLCTS SG+  HKC H+  YMN S+FRWCGSNYDALGNPRF GG+I+G EW + RL  N T+V+SL+WGYT FDNIFVAFL+IFQSITMEGWS+I YQ+KD  LPILGDVFFIILILWGSFFTLNLLLAVLEGNFT
Sbjct:  248 MNYADYRCLSVSNFDVVDDEPSWTQSTSPWATPRECWWPIDSEDERLCTSNSGSGKHKCEHDERYMNLSEFRWCGSNYDALGNPRFAGGMIEGVEWGSGRLTDNATFVQSLNWGYTNFDNIFVAFLTIFQSITMEGWSDILYQIKDCSLPILGDVFFIILILWGSFFTLNLLLAVLEGNFT 428          
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.250e-89
Identity = 138/181 (76.24%), Postives = 156/181 (86.19%), Query Frame = 0
Query:    1 MNYTEHRCLNVENFDVVNDR--WTINTSPWSTPRECWWPIDHEDERLCTSTSGN--HKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGIIQGEEWSTERLMANGTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQVKDAHLPILGDVFFIILILWGSFFTLNLLLAVLEGNFT 177
            MNYT++RCL+V NFDVV+D   WT +TSPW+TPRECWWPID E+ERLCTS SG+  HKC H+  YMN S+FRWCGSNYDALGNPRF GG+I+G EW   RL  N T+V+SL+WGYT FDNIFVAFL+IFQSITMEGWS++ YQVKD  LPILGDVFFIILILWGSFFTLNLLLAVLEGNFT
Sbjct:  248 MNYTDYRCLSVSNFDVVDDEPSWTQSTSPWATPRECWWPIDSENERLCTSNSGSGKHKCEHDDRYMNLSEFRWCGSNYDALGNPRFAGGVIEGVEWGAGRLTDNATFVQSLNWGYTNFDNIFVAFLTIFQSITMEGWSDVLYQVKDCSLPILGDVFFIILILWGSFFTLNLLLAVLEGNFT 428          
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Match: D8LI93_ECTSI (Similar to sodium channel, voltage-gated, type IX, alpha isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI93_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 3.110e-76
Identity = 116/182 (63.74%), Postives = 145/182 (79.67%), Query Frame = 0
Query:    1 MNYTEHRCLNVENFDVVND--RWTINTSPWSTPRECWWPIDHEDERLCT--STSGNHKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGI-IQGEEWSTERLMANGTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQVKDAHLPILGDVFFIILILWGSFFTLNLLLAVLEGNFT 177
            M+Y +HRCL   NFDVV++   WT ++SPWSTP++CWWP+D +D RLC    + GNH+C H+  Y+NESDFRWCGS+YDALGN RF GG+ ++G  W    L  N T+VE L+WGYTTFDNIFVAFL+IFQSIT+EGWS+I YQVKD   P+L D+FFI+L+LWG+FFTLNLLLAVLE NF+
Sbjct:    1 MDYADHRCLEASNFDVVDEDNSWTQSSSPWSTPQDCWWPLDTDDTRLCAFDGSPGNHQCEHDPAYLNESDFRWCGSDYDALGNRRFEGGVTLEGSPWGGWNLTDNATFVEDLAWGYTTFDNIFVAFLTIFQSITLEGWSDILYQVKDCSRPVLADLFFIVLVLWGAFFTLNLLLAVLENNFS 182          
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Match: A0A6H5KPD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD7_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.040e-67
Identity = 116/234 (49.57%), Postives = 145/234 (61.97%), Query Frame = 0
Query:    1 MNYTEHRCLNVENFDVVND--RWTINTSPWSTPRECWWPIDHEDERLCT--STSGNHKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGI-IQGEEWSTERLMANGTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQV----------------------------------------------------KDAHLPILGDVFFIILILWGSFFTLNLLLAVLEGNFT 177
            M+Y +HRCL   NFDVV++   WT ++SPWSTP++CWWP+D +D RLC    + GNH+C H+  Y+NESDFRWCGS+YDALGN RF GG+ ++G  W    L  N T+VE L+WGYTTFDNIFVAFL+IFQSIT+EGWS+I YQV                                                    KD   P+L D+FFI+L+LWG+FFTLNLLLAVLE NF+
Sbjct:  248 MDYADHRCLEASNFDVVDEDNSWTQSSSPWSTPQDCWWPLDTDDTRLCAFDDSPGNHQCEHDPAYLNESDFRWCGSDYDALGNRRFEGGVTLEGSPWGGWNLTDNATFVEDLAWGYTTFDNIFVAFLTIFQSITLEGWSDILYQVVVDCVCVCVLFFVLFQGHCRRRRXXXXXXXXXXTRRRAWSLGGCGAFFRWQVKDCSRPVLADLFFIVLVLWGAFFTLNLLLAVLENNFS 481          
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Match: A0A812YMS5_9DINO (SCN4A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YMS5_9DINO)

HSP 1 Score: 167 bits (422), Expect = 2.310e-46
Identity = 78/163 (47.85%), Postives = 110/163 (67.48%), Query Frame = 0
Query:   16 VVNDRWTINTSPWSTPRECWWPIDHEDERLCT-STSGNHKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGIIQGEEWSTERLMANGTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQVKDAHLPILGDVFFIILILWGSFFTLNLLLAVLEGNFT 177
            +++D WT ++SPWSTP+ C+WP+D EDE  CT   +G H+C       N +  RWCGS+YD LGNPRF          S+E ++  GT+ ESL+WG+  FDNI +A L+IFQ+IT+EGW+ I Y   D + P++   +FI+L+L+GSFF LNL LAV+  NF+
Sbjct:  163 LIDDSWTKDSSPWSTPQPCFWPVDPEDESFCTVGEAGLHRCP------NAAQARWCGSDYDFLGNPRF----------SSESVVEAGTFAESLNWGFIVFDNIGIALLAIFQAITLEGWTTIMYHTMDVYSPVVSGAYFIVLVLFGSFFLLNLTLAVIWDNFS 309          
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Match: A0A7S1G9I4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G9I4_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.950e-38
Identity = 78/167 (46.71%), Postives = 104/167 (62.28%), Query Frame = 0
Query:   12 ENFDVVNDRWTINTSPWSTPRECWWPIDHEDERLCTSTSGN-HKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGIIQGEEWSTERLMANGTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQVKDAHLPILGDVFFIILILWGSFFTLNLLLAVLEGNFT 177
            E    V + W   T PW+TP +C+WP+D  D  +C+ + G  H+C         SD RWCGSNYD  G PRF+     G++          T+V  L+WGYT FDN+F A L+IFQ ITMEGW+++ YQV+DAH  ++  V+FI LIL+GSFF LNL LAV+  NF+
Sbjct:  249 EKCHAVPEPWNPET-PWTTPVDCFWPVDDTDVFVCSMSGGGAHEC--------RSD-RWCGSNYDINGQPRFSNA---GQD--------KATFVRDLNWGYTNFDNMFAALLTIFQMITMEGWTDVMYQVQDAHNAVVSAVYFIFLILFGSFFLLNLTLAVIWDNFS 394          
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Match: A0A225VQ21_9STRA (Voltage-gated Ion Channel n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQ21_9STRA)

HSP 1 Score: 147 bits (372), Expect = 7.450e-38
Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 0
Query:    2 NYTEHRCLNVE--NFDVVNDRWTINTSPWSTPRECWWPIDHEDERLCTST--SGNHKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGIIQGEEWSTERLMANGTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQVKDAHLPILGDVFFIILILWGSFFTLNLLLAVLEGNF 176
            N T + C++    +++   D +T+ TSPW+TP++C+WP+D  D  LC +   +GNH+C  N         + CGS+YD  GNPRF             + M    Y+ SL WG TTFDNI  AF +IFQSIT EGW+ I Y V D+  P +G +FF++LI++ SFF +NL LAV+   F
Sbjct:  272 NETAYYCMDAPLLDYEDTTDTYTMETSPWNTPQDCFWPVDDNDTLLCVAPGQAGNHECNFN---------KTCGSDYDTYGNPRFR----------HHKAMIYALYLPSLDWGLTTFDNIGRAFFTIFQSITQEGWTIIMYMVMDSSQPAIGAIFFVVLIIFASFFVMNLTLAVISEEF 431          
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Match: A0A7S0PH88_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PH88_CAFRO)

HSP 1 Score: 144 bits (362), Expect = 2.550e-37
Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 0
Query:   16 VVNDRWTINT-SPWSTPRECWWPIDHEDERLCTSTS-GNHKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGIIQGEEWSTERLMANGTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQVKDAHLPILGDVFFIILILWGSFFTLNLLLAVLEGNFT 177
            V +  W++   SPW TP+ C+WP+D EDER+CT    G H C            R+CGSNYD++ NPRF   ++    W           V  L+WG T+FD+I VA LSIFQSITMEGW+ I Y V D++  ++G V+F++LIL+GSFF LNLLLAV+   F+
Sbjct:  363 VESGEWSVREDSPWFTPQPCFWPVDAEDERICTLGGLGEHTCGAG---------RFCGSNYDSVQNPRFVNELLT--RWDNR--------VAGLNWGLTSFDHILVAVLSIFQSITMEGWTTIMYMVMDSYNGVVGGVYFVVLILFGSFFLLNLLLAVIWEQFS 507          
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Match: A0A662YH95_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YH95_9STRA)

HSP 1 Score: 145 bits (365), Expect = 6.480e-37
Identity = 81/179 (45.25%), Postives = 105/179 (58.66%), Query Frame = 0
Query:    2 NYTEHRCLNVENFDVVN--DRWTINTSPWSTPRECWWPIDHEDERLCTST--SGNHKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGIIQGEEWSTERLMANGTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQVKDAHLPILGDVFFIILILWGSFFTLNLLLAVLEGNF 176
            N +  RCL+    D  +  + +T  TSPW+TP++C+WP+D  DE LC +   SGNH C    L  N      CGSNYD+ GN RF          S  + M    Y  SL WGYTTFD+I  AF +IFQSIT EGW+ I Y V D+  P++G  FF+ILI++ SFF +NL LAV+   F
Sbjct:  202 NSSAFRCLDAPLLDYEDSTNSYTKETSPWNTPQDCFWPVDDNDEMLCAAPQQSGNHPC----LGGNT-----CGSNYDSYGNARF----------SNSKAMDYALYRASLDWGYTTFDDIGHAFFTIFQSITQEGWTLIMYMVMDSSQPLVGACFFVILIIFASFFVMNLTLAVISEEF 361          
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Match: K3W515_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W515_GLOUD)

HSP 1 Score: 145 bits (365), Expect = 6.490e-37
Identity = 76/181 (41.99%), Postives = 108/181 (59.67%), Query Frame = 0
Query:    2 NYTEHRCLNVENFDVVNDR---WTINTSPWSTPRECWWPIDHEDERLCTST--SGNHKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGIIQGEEWSTERLMANGTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQVKDAHLPILGDVFFIILILWGSFFTLNLLLAVLEGNFT 177
            N  + RCL+V   +  ++R   +T  TSPW+ P++C+WP+D  D++LC +   SGNH+C+             CGSNYDA GN RF             + M    Y   L+WGYT FD+I  AFL+IFQSIT EGW+ I Y V D+  P++G +FF++LI++ SFF +NL LAV+   F+
Sbjct:  229 NPDDFRCLDVPVLEYHDNRTSMFTKETSPWNKPQDCFWPVDDSDQQLCAAPGQSGNHQCSSETT---------CGSNYDAFGNARF----------KYHKAMDYALYDVDLNWGYTQFDDIGGAFLTIFQSITQEGWTLIMYMVMDSSQPVIGSLFFVVLIIFASFFVMNLTLAVITEKFS 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16966.3901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJ68_9PHAE1.660e-9676.24Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FVE6_ECTSI1.250e-8976.24Voltage Gated Calcium/Sodium Channel subunit alpha... [more]
D8LI93_ECTSI3.110e-7663.74Similar to sodium channel, voltage-gated, type IX,... [more]
A0A6H5KPD7_9PHAE1.040e-6749.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A812YMS5_9DINO2.310e-4647.85SCN4A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A7S1G9I4_9STRA2.950e-3846.71Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A225VQ21_9STRA7.450e-3841.90Voltage-gated Ion Channel n=1 Tax=Phytophthora meg... [more]
A0A7S0PH88_CAFRO2.550e-3746.34Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A662YH95_9STRA6.480e-3745.25Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
K3W515_GLOUD6.490e-3741.99Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 96..177
e-value: 9.4E-13
score: 50.0
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUMcoord: 4..176
NoneNo IPR availablePANTHERPTHR10037:SF62SODIUM CHANNEL PROTEIN 60Ecoord: 4..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..150
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 110..175
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 148..170
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 107..176
e-value: 7.9E-15
score: 54.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16966contigH-paniculata_contig16966:3568..4817 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16966.3901.1mRNA_H-paniculata_contig16966.3901.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16966 3568..4832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16966.3901.1 ID=prot_H-paniculata_contig16966.3901.1|Name=mRNA_H-paniculata_contig16966.3901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp
MNYTEHRCLNVENFDVVNDRWTINTSPWSTPRECWWPIDHEDERLCTSTS
GNHKCAHNLLYMNESDFRWCGSNYDALGNPRFTGGIIQGEEWSTERLMAN
GTYVESLSWGYTTFDNIFVAFLSIFQSITMEGWSEIQYQVKDAHLPILGD
VFFIILILWGSFFTLNLLLAVLEGNFT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom