prot_H-paniculata_contig16956.3894.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig16956.3894.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI) HSP 1 Score: 291 bits (746), Expect = 9.880e-85 Identity = 219/410 (53.41%), Postives = 249/410 (60.73%), Query Frame = 0
Query: 2 HNPQVNLFFDDFSPDQSAAMCFSIACGLPKDLSALSSDDAGGNIMA-------------AAAAAPNHQVRARALDAALKNCKPPGFSSPLAAAGGGGSXXXXXXXXXXMDIGGVTIGEKFNNSALHNGLQLFIARLLRPFWFRPVVICGGDNGSGGXXXXXXXXXXXXDGQAKSGIGGGVPAIMDLAALIGPLELLRVSIRSAFPRAVAEDLAAKAXXXXXXXXXXXXXPAEQGVALLIAAAKDWKGERALGGEGQLARACAALESVGRLDAVVDVCMSCARNFDPHGRGGAGRGXXXXXXXXXXXXXXXXXVTTLAWEEGVYQGGGVVGTAEREKATLECYQRVLNTVLGLMETPPPSPQNGEAQVNGGFDSNARSTYSRNMERAAGLLSRILAYDAPKLHEMLFQLLE 398
H V LFF+DFSPDQSAAMCFSIACGLP+DL S +A AA P+H VRARALDAAL CKPPGFSSP AGGG XXXXXX GGV +GEKF NSALHNGLQLFI RLLRPFWF PVV+ XXXXXXXXXXXX + DL AL PLE LR SIR+ FPRAV EDLAA A A G LL AA++W+GERALG +GQLARACAAL +VGRL+AVVDVCM+CA+NF G G GXXXXXXXXX AWEEGVYQGGG+VG +REKA LECY+RVL V+GL++ ++ A G R ++ L++R L+Y AP L EMLF +LE
Sbjct: 690 HVEGVVLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXPVAGSTXXXXCNPSVPAANGVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXF------VRDLEALRVPLESLRASIRAVFPRAVGEDLAALARLTAAAEAD-----ARWGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNF---GEGVVASGXXXXXXXXXVE----------AWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQEQQQLRSATAAAGQGG--------VRGSKKVDSLIARCLSYKAPLLEEMLFGVLE 1067
BLAST of mRNA_H-paniculata_contig16956.3894.1 vs. uniprot
Match: A0A6H5J909_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J909_9PHAE) HSP 1 Score: 193 bits (491), Expect = 7.610e-51 Identity = 200/572 (34.97%), Postives = 232/572 (40.56%), Query Frame = 0
Query: 21 MCFSIACGLPKDLSA-----------LSSDDAGGNI---MAAAAAAPNHQVRARALDAALKNCKPPGFSSPLAAAGGGGSXXXXXXXXXXMDIGGVTIGEKFNNSALHNGLQLFIARLLRPFWFRPVVICGGDNGSGGXXXXXXXXXXXXDGQAKSGIGGGVPAIMDLAALIGPLELLRVSIRSAFPRAVAEDLAAKAXXXXXXXXXXXXX------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAEQGVALLIAAAKDWKGERALGGEGQLARACAALESVGRLDAVVDVCMSCARNFDPHGRGGAGRGXXXXXXXXXXXXXXXXXVTTLAWEEGVYQGGGVVGTAEREKATLECYQRVLNTVLGLMETPPPSPQNGEAQVNGGFDSNARSTYSRNMERAAGLLSRILAYDAPKLHEMLFQLLE 398
MCFSIACGLP+DL ++ GG + A PNH VRARALDAAL CKPPGFSSP AGGG XXXX GGV +GEKF NSALHNGLQLFI RLLRPFWF PVV+ XXXXXXXXXXXX + DL AL PLE LR SIR+ FPRAV EDLAA A A +G LL AA++W+GERALG +GQLARACAAL +VGRL+AVVDVCM+CA+NF G G GXXXXXXXX AWEEGVYQGGG+VG +REKA LECY+RVL V+GL++ ++ R + ++ L++R L+Y AP L EMLF +LE
Sbjct: 1 MCFSIACGLPRDLGTGCGGXXXXXXPVAGSTGGGGYNPSVPTAYGVPNHTVRARALDAALMICKPPGFSSPGQPAGGG--IGIGXXXXVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXF------VRDLEALRVPLESLRASIRAVFPRAVGEDLAALASREAKAAAAVPASGGLLGNXXXXXXXXXXGLVVAPGGYPTPETPQQRNQKALKREALEVHAAYRLVSRAAEAVRMAGVLARAAASSAVGGAAAVDNVPWSSLDGVPLWRLVTGGDEHRRASFLLADLVGATTKGNNNAESRRDYARELGSWCRGFFGAGDRQTFEGVELLRRAAASGXXXXXXXXRLTAAAEADARRGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNF---GEGVVASGXXXXXXXXGLE----------AWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQERQQLRSAXXXXXXXGQGGVRGS-----KKVDSLIARCLSYKAPLLEEMLFGVLE 546
BLAST of mRNA_H-paniculata_contig16956.3894.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 1.020e-7 Identity = 49/154 (31.82%), Postives = 69/154 (44.81%), Query Frame = 0
Query: 6 VNLFFDDFSPDQSAAMCFSIACGLPKDLSALSS---------DDAGGNIMAAAAAAPN-----HQVRARALDAALKNCKPPGFSSPLAAAGGGGSXXXXXXXXXXMDI-------GGVTIGEKFNNSALHNGLQLFIARLLRPFWFRPVVICGG 138
+ FF F +QS AMCFSIACGLP DL +S +D+ + AAA+ P+ +VR RA+ A + P S PL++ G S +F+ S H GL L R+LRP WF+P+++ G
Sbjct: 615 IGTFFQLFGKEQSCAMCFSIACGLPTDLVEAASAASVAFPTQNDSALALAAAASPGPSLNPTVERVRERAVLVAQQLGGNPSISPPLSSGGEATSTGMSVATPGTPGTPRHQPTAANTVFTPEFSYSDQHEGLVLLATRILRPLWFKPIILAEG 768 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16956.3894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig16956.3894.1 ID=prot_H-paniculata_contig16956.3894.1|Name=mRNA_H-paniculata_contig16956.3894.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=398bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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