prot_H-paniculata_contig16952.3892.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16952.3892.1
Unique Nameprot_H-paniculata_contig16952.3892.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length351
Homology
BLAST of mRNA_H-paniculata_contig16952.3892.1 vs. uniprot
Match: D7G7D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D4_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.740e-53
Identity = 135/293 (46.08%), Postives = 184/293 (62.80%), Query Frame = 0
Query:   28 FHDREALEEKMQQLRAEELRLSATEEDLKEKLSHAEAALSAIRSEKRELSTANTLNAVVEGQQYMGRRTMSKNNVKWGGRSSVKSERNINSEGNGDERLKRREELVNFEATDRIMELEVLNNQLRKGQANAESEASSNDAAARLTQGELERAEKRLNSIPKRFTESLQMLHDEVEGLEKEKLSLELAKNRKNLQEADVMADIRRQQKELAAELDYLIDDIHDVEDDRDVWKRQLHVESSCATALQAQRFEALTNLKARFGEDAVDRAAFATAVFKDEDEARGLEGCSGVSILG 320
            F+D+EAL+E++Q L+AE + LS  E  L  +L+ A+A LS +R +K  LS A  L+ V+                   GR   +SE N +  G  + R ++R E  NF A DR+MELE+LN+QLRKGQA AE  A   +   R T+ E+ +  +RL ++PKRFT+SLQ L DEVE LE+EK +LELAK RK  +EAD++A  +RQQ  L  EL  L+D+I DVEDDRD WKR+L VE++ A +L++QR EAL  L+ RFG DAV+RAAFA   F    +  G +G   +S  G
Sbjct:   52 FYDKEALQEQLQGLQAEGIDLSEKETHLGLRLAKAQATLSKMREKKVGLSQAKMLDEVMSVFPAKAADISV-------GRKHRESESNGDGGGRREARSQQRHEETNFAAQDRVMELELLNSQLRKGQAEAERNAKLQEDTFRSTRAEVNKVAERLKAMPKRFTQSLQSLRDEVETLEREKFNLELAKERKTSKEADLIASAKRQQSYLGEELKSLLDEIDDVEDDRDRWKRRLRVETTRAESLRSQRDEALRALRERFGSDAVERAAFAR--FATAPKGSGGDGLMALSRRG 335          
BLAST of mRNA_H-paniculata_contig16952.3892.1 vs. uniprot
Match: A0A6H5K3E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E6_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 2.950e-53
Identity = 154/385 (40.00%), Postives = 210/385 (54.55%), Query Frame = 0
Query:   28 FHDREALEEKMQQLRAEELRLSATEEDLKEKLSHAEAALSAIRSEKRELSTANTLNAVVE------GQQYMGRRTM-SKNNVKWGGRSSVKSERNINSEGNGDERLKRREELVNFEATDRIMELEVLNNQLRKGQANAESEASSNDAAARLTQGELERAEKRLNSIPKRFTESLQMLHDEVEGLEKEKLSLELAKNRKNLQEADVMADIRRQQKELAAELDYLIDDIHDVEDDRDVWKRQLHVESSCATALQAQRFEALTNLKARFGEDAVDRAAFATAVFKDEDEARGLEGCS-------------------------------------GVSILG--------IAEALRPVYKPD-DKE--------FSKEAVLEA-VEECGI 350
            F+D+EAL+E++Q LRAE + LS  E  L  +L+ A+A LS +R +   LS A  L+ V+           +G++   S++N  +GGR   +S++              R E  NF A DR+MELE+LN+QLRKGQA AE  A   +A  R T+ E+ +  +RL ++PKRFT+SLQ L DEVE LE+EK  LELAK RK  +EAD++A  +RQQ  L  EL  L+D+I DVEDDRD WKR+L VE++   +L++QR EAL  L+ RFG DAV+R AFA      +   +GL   S                                     G S LG        I++AL+PVY PD D +         + EAV EA + ECGI
Sbjct:   65 FYDKEALQEQLQGLRAEGIDLSEKEARLGFRLAKAQATLSRMREKMVGLSQAKMLDEVMSVFPARAADVSVGKKHRESESNGDYGGRREARSQQ--------------RHEETNFAAQDRVMELELLNSQLRKGQAEAERNAKLQEATFRSTRAEVNKVAERLKAMPKRFTQSLQSLQDEVETLEREKFDLELAKERKTSKEADLLASAKRQQSYLGEELSSLLDEIDDVEDDRDRWKRRLRVETTRTESLRSQREEALRALRERFGSDAVERVAFARFATGPKGSGKGLMTLSRRGRRGGRGTGSDRDEEDDYEDGDHDSGERDDSGERGGFSDLGSPKILVSMISKALKPVYGPDCDHDGGGEGFALLTDEAVAEAALSECGI 435          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16952.3892.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7D4_ECTSI1.740e-5346.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3E6_9PHAE2.950e-5340.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..161
NoneNo IPR availableCOILSCoilCoilcoord: 31..72
NoneNo IPR availableCOILSCoilCoilcoord: 194..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16952contigH-paniculata_contig16952:3147..4952 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16952.3892.1mRNA_H-paniculata_contig16952.3892.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16952 3147..4952 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16952.3892.1 ID=prot_H-paniculata_contig16952.3892.1|Name=mRNA_H-paniculata_contig16952.3892.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=351bp
YSDSSPPKTAAFDEHRSPMPCRHQLPSFHDREALEEKMQQLRAEELRLSA
TEEDLKEKLSHAEAALSAIRSEKRELSTANTLNAVVEGQQYMGRRTMSKN
NVKWGGRSSVKSERNINSEGNGDERLKRREELVNFEATDRIMELEVLNNQ
LRKGQANAESEASSNDAAARLTQGELERAEKRLNSIPKRFTESLQMLHDE
VEGLEKEKLSLELAKNRKNLQEADVMADIRRQQKELAAELDYLIDDIHDV
EDDRDVWKRQLHVESSCATALQAQRFEALTNLKARFGEDAVDRAAFATAV
FKDEDEARGLEGCSGVSILGIAEALRPVYKPDDKEFSKEAVLEAVEECGI
K
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