prot_H-paniculata_contig16950.3891.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16950.3891.1
Unique Nameprot_H-paniculata_contig16950.3891.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length55
Homology
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Match: D7FQT5_ECTSI (SRP101, alpha subunit of the signal recognition particle receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT5_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 5.690e-18
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 0
Query:    7 LQNNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQVCA 53
            +QNNEPLMRALSKLINENEP LVLFVGEALVGNDGVNQL MFNQ  A
Sbjct:  477 MQNNEPLMRALSKLINENEPELVLFVGEALVGNDGVNQLQMFNQALA 523          
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Match: A0A444DVV9_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444DVV9_ENSVE)

HSP 1 Score: 75.5 bits (184), Expect = 7.520e-16
Identity = 40/53 (75.47%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    3 FCLLL----QNNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQV 51
            FC+LL    Q+NEPLMRALSKLIN N P+LVLFVGEALVGND V+QL  FNQV
Sbjct:  101 FCILLPVASQDNEPLMRALSKLINLNNPDLVLFVGEALVGNDAVDQLTKFNQV 153          
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Match: A0A5K1FVJ2_9MAGN (Uncharacterized protein (Fragment) n=1 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1FVJ2_9MAGN)

HSP 1 Score: 70.5 bits (171), Expect = 6.870e-15
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    9 NNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQV 51
            +NEPLMRALSKLIN N P+LVLFVGEALVGND V+QL+ FNQV
Sbjct:    1 DNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQV 43          
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Match: H3G7F3_PHYRM (SRP54 domain-containing protein n=23 Tax=Phytophthora TaxID=4783 RepID=H3G7F3_PHYRM)

HSP 1 Score: 76.3 bits (186), Expect = 7.430e-15
Identity = 35/47 (74.47%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    7 LQNNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQVCA 53
            +QNNEPLMRAL+KL++ NEP+LVLFVGEALVGNDG++QLAMF++  A
Sbjct:  490 MQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLAMFDRALA 536          
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Match: A0A662XUH7_9STRA (SRP54 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUH7_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 7.430e-15
Identity = 35/47 (74.47%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    7 LQNNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQVCA 53
            +QNNEPLMRAL+KL++ NEP+LVLFVGEALVGNDG++QLAMF++  A
Sbjct:  485 MQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLAMFDRALA 531          
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Match: A0A176WI44_MARPO (SRP54 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WI44_MARPO)

HSP 1 Score: 75.9 bits (185), Expect = 1.020e-14
Identity = 38/47 (80.85%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    7 LQNNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQVCA 53
            +Q+NEPLMRALSKLIN NEP+LVLFVGEALVGNDGV+QL  FNQ  A
Sbjct:  529 MQDNEPLMRALSKLINVNEPDLVLFVGEALVGNDGVDQLMKFNQSLA 575          
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Match: A0A0P1B7H3_PLAHL (Signal recognition particle receptor subunit alpha n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7H3_PLAHL)

HSP 1 Score: 75.5 bits (184), Expect = 1.390e-14
Identity = 34/47 (72.34%), Postives = 45/47 (95.74%), Query Frame = 0
Query:    7 LQNNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQVCA 53
            +QNNEPLMRAL+KL+++NEP+LVLFVGEALVGNDG++QL+MF++  A
Sbjct:  490 MQNNEPLMRALAKLVSKNEPDLVLFVGEALVGNDGIDQLSMFDRALA 536          
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Match: A0A2K1IZA8_PHYPA (SRP54 domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IZA8_PHYPA)

HSP 1 Score: 75.5 bits (184), Expect = 1.390e-14
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    7 LQNNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQVCA 53
            +Q+NEPLMRALSKLIN N+P+LVLFVGEALVGNDGV+QL  FNQ  A
Sbjct:  538 MQDNEPLMRALSKLINMNDPDLVLFVGEALVGNDGVHQLTQFNQKLA 584          
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Match: A0A3M6VSC8_9STRA (SRP54 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSC8_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.900e-14
Identity = 34/47 (72.34%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    7 LQNNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQVCA 53
            +QNNEPLMRAL+KL++ NEP+LVLFVGEALVGNDG++QL+MF++  A
Sbjct:  488 MQNNEPLMRALAKLVSNNEPDLVLFVGEALVGNDGIDQLSMFDRALA 534          
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Match: A0A4U5LVN4_STECR (SRP54 domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5LVN4_STECR)

HSP 1 Score: 75.1 bits (183), Expect = 1.900e-14
Identity = 36/47 (76.60%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    7 LQNNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQVCA 53
            +QNNEPLMRALSKLIN+N+P+LVLFVGEALVGN+ V+QL  FNQ  A
Sbjct:  531 MQNNEPLMRALSKLINDNKPDLVLFVGEALVGNEAVDQLVKFNQALA 577          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16950.3891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQT5_ECTSI5.690e-1889.36SRP101, alpha subunit of the signal recognition pa... [more]
A0A444DVV9_ENSVE7.520e-1675.47Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]
A0A5K1FVJ2_9MAGN6.870e-1581.40Uncharacterized protein (Fragment) n=1 Tax=Nymphae... [more]
H3G7F3_PHYRM7.430e-1574.47SRP54 domain-containing protein n=23 Tax=Phytophth... [more]
A0A662XUH7_9STRA7.430e-1574.47SRP54 domain-containing protein n=2 Tax=Nothophyto... [more]
A0A176WI44_MARPO1.020e-1480.85SRP54 domain-containing protein n=2 Tax=Marchantia... [more]
A0A0P1B7H3_PLAHL1.390e-1472.34Signal recognition particle receptor subunit alpha... [more]
A0A2K1IZA8_PHYPA1.390e-1478.72SRP54 domain-containing protein n=2 Tax=Physcomitr... [more]
A0A3M6VSC8_9STRA1.900e-1472.34SRP54 domain-containing protein n=2 Tax=Peronospor... [more]
A0A4U5LVN4_STECR1.900e-1476.60SRP54 domain-containing protein n=1 Tax=Steinernem... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 6..54
e-value: 4.8E-10
score: 41.1
NoneNo IPR availablePANTHERPTHR43134:SF1SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAcoord: 6..52
NoneNo IPR availablePANTHERPTHR43134FAMILY NOT NAMEDcoord: 6..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16950contigH-paniculata_contig16950:483..647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16950.3891.1mRNA_H-paniculata_contig16950.3891.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16950 483..647 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16950.3891.1 ID=prot_H-paniculata_contig16950.3891.1|Name=mRNA_H-paniculata_contig16950.3891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp
MCFCLLLQNNEPLMRALSKLINENEPNLVLFVGEALVGNDGVNQLAMFNQ
VCAR*
back to top