prot_H-paniculata_contig1695.3890.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1695.3890.1
Unique Nameprot_H-paniculata_contig1695.3890.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.460e-13
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 0
Query:    1 MNKAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDFLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIT 105
            + +++YGL+QA R W K LV  +   +G  Q   D CV RL + GVV M++ VHVDD+   GK  +C+     L      T  GEL+ Y G  F RD  +G + ++
Sbjct:  747 LRRSLYGLKQASRTWHKHLVRGM-KCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQGTITLS 851          
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Match: A0A6H5KGA6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA6_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.020e-12
Identity = 40/106 (37.74%), Postives = 59/106 (55.66%), Query Frame = 0
Query:    1 MNKAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDFLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIT 105
            + K++YGLRQA R++ KRLV  L   +G  QS  DPCV R      V  ++ +HVDD++  G       +  AL     T   GE++++LGCAF RD   G + ++
Sbjct:    8 LGKSLYGLRQASRIFHKRLVSDL-KRIGFEQSLSDPCVLRFMMGDEVLGMIAIHVDDILYEGIERLAKMVVEALGDSLPTKNLGEIRFFLGCAFVRDREAGTIEMS 112          
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Match: A0A535EX56_9CHLR (DDE-type integrase/transposase/recombinase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535EX56_9CHLR)

HSP 1 Score: 68.6 bits (166), Expect = 2.920e-11
Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    1 MNKAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMILCVHVDDVIVAGKSV-KCDFLFAALRAEFQTTR-GELKWYLGCAFWRDIVR 99
            + K +YGL+QA R+W+ RL + L++ +G  QS  DPC++   K G+   I+ + VDD+IV GK +   + + A LR EF+    GELK++LG    RD V+
Sbjct: 1001 LEKGLYGLKQAARLWNLRLQKYLLS-LGFKQSVCDPCIYINNKTGI---IIAIWVDDLIVLGKDLDSINKIKAELRNEFEMKDLGELKYFLGMQVTRDRVQ 1097          
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Match: A0A0C3EEU5_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Scleroderma citrinum Foug A TaxID=1036808 RepID=A0A0C3EEU5_9AGAM)

HSP 1 Score: 65.5 bits (158), Expect = 3.520e-10
Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    1 MNKAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMILCVHVDDVIVAGKSV-KCDFLFAALRAEFQTTR-GELKWYLG 90
            + K +YGL+Q+GR W +RLVE+LV+ +G TQ   D  V+   +     +++ VHVDD  +A KS+ + D     +R   + T  GEL W LG
Sbjct:  979 LRKTLYGLKQSGRHWYQRLVEILVDELGFTQCSVDQAVYFRRRTPGELIVVVVHVDDCTIAAKSLNEIDEFKHNIRKHVEITDLGELHWLLG 1070          
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Match: A0A8H6U2K2_9AGAR (Transcription factor n=2 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6U2K2_9AGAR)

HSP 1 Score: 64.7 bits (156), Expect = 6.580e-10
Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    3 KAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMILCVHVDD-VIVAGKSVKCDFLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIT 105
            KA+YGL+QAGR+W   + ++LV  +G T+   DP VF +   GV  +I+ +HVDD +I++     C  +   + A ++ T  G ++W LG    R  VR + RIT
Sbjct: 1081 KALYGLKQAGRLWYWAVYDLLVRRLGFTRCAADPAVFYIFVGGV-GIIIGIHVDDSLILSNSKAACAAVKRQIAAHYEITDLGAVRWLLGFEIRR--VRAIRRIT 1182          
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Match: A0A507FH27_9FUNG (DNA-directed DNA polymerase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FH27_9FUNG)

HSP 1 Score: 64.7 bits (156), Expect = 6.590e-10
Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 0
Query:    1 MNKAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDFLFAALRAEFQTTR-GELKWYLG 90
            +NKA+YGL+QAGR+W  RL   L    G  QS+ DPCVF  + +    +IL ++VDD+ + G     D   A LRAEF+    GEL  ++G
Sbjct: 1177 LNKAIYGLKQAGRVWFYRLTSYLKAK-GYQQSRADPCVF-FQHSDSDSVILSIYVDDLAMFGTPAALDRTVATLRAEFKLRDLGELSHFVG 1265          
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Match: A0A0J7KLS9_LASNI (Opie2a pol protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KLS9_LASNI)

HSP 1 Score: 63.9 bits (154), Expect = 1.200e-9
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    1 MNKAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKCDFLFAA-LRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIT 105
            M KA+YGL+QAG  W KRL E L  ++G T SK DPC++  +++G + +I  V+VDD+IV  ++ +    F A L   F     G+LK  LG  F +D  R  +RI 
Sbjct:  548 MKKALYGLKQAGHAWHKRLDEEL-RSLGATPSKGDPCLYLKDRSGRL-LIAVVYVDDIIVMSENPQAVMQFGADLSKRFDMKDVGKLKRCLGMDFVQD--RSGIRIN 650          
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Match: A0A165BJT7_EXIGL (Uncharacterized protein (Fragment) n=2 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165BJT7_EXIGL)

HSP 1 Score: 63.5 bits (153), Expect = 1.660e-9
Identity = 37/96 (38.54%), Postives = 52/96 (54.17%), Query Frame = 0
Query:    3 KAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVKC--DFLFAALRAEFQTTRGELKWYLGCAFWRD 96
            K +YGL+Q+GR W +RLVE+L   +  T+S+ D  VF     G   +I+ VHVDD  +A  +V+   +F     +    T  GEL W LG    RD
Sbjct:  827 KTLYGLKQSGRRWYQRLVEILCGKLAFTRSEVDQAVFFKVVRGGQLVIVVVHVDDCTIAASTVQLVREFKNDVRKHVEITDLGELHWLLGIEVRRD 922          
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Match: A0A1Y6LD98_ZYMTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Zymoseptoria tritici ST99CH_1A5 TaxID=1276529 RepID=A0A1Y6LD98_ZYMTR)

HSP 1 Score: 60.8 bits (146), Expect = 2.070e-9
Identity = 35/107 (32.71%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    1 MNKAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVK-CDFLFAALRAEFQTTR-GELKWYLGCAFWRDIVRGVVRIT 105
            + KA+YGL+QA R+W K L++ L +  G  Q  +D  VF+ +   ++     V+VDD+++AG  +K  + +  +L   F+    GE K++LG    RD  +G++++T
Sbjct:   47 LKKALYGLKQAPRIWYKTLIDALAS-FGFEQCLYDTAVFKKDNTFIL-----VYVDDLLIAGPDIKQIEDVKKSLSDRFKMKDIGECKFFLGIGIERDRSKGLIKLT 147          
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Match: A0A3Q0EVF0_VIGRR (uncharacterized protein LOC111241419 n=1 Tax=Vigna radiata var. radiata TaxID=3916 RepID=A0A3Q0EVF0_VIGRR)

HSP 1 Score: 62.0 bits (149), Expect = 5.190e-9
Identity = 37/92 (40.22%), Postives = 57/92 (61.96%), Query Frame = 0
Query:    1 MNKAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMILCVHVDDVIVAGKSVK-CDFLFAALRAEFQTTR-GELKWYLG 90
            + K++YGL+QA R W  +L   L++N   TQSK D  +F +++      +L V+VDD+I+AG S+K  D + A L   F+    GELK++LG
Sbjct:  126 LTKSLYGLKQASRQWFDKLSSFLLSN-NYTQSKSDHSLF-IKRTSTTFTVLLVYVDDIILAGNSIKEIDHIKALLHHAFRIKNLGELKYFLG 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1695.3890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCD8_9PHAE1.460e-1337.74Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KGA6_9PHAE1.020e-1237.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A535EX56_9CHLR2.920e-1140.59DDE-type integrase/transposase/recombinase (Fragme... [more]
A0A0C3EEU5_9AGAM3.520e-1039.13Integrase catalytic domain-containing protein n=1 ... [more]
A0A8H6U2K2_9AGAR6.580e-1037.14Transcription factor n=2 Tax=Mycena sanguinolenta ... [more]
A0A507FH27_9FUNG6.590e-1042.86DNA-directed DNA polymerase n=1 Tax=Chytriomyces c... [more]
A0A0J7KLS9_LASNI1.200e-941.12Opie2a pol protein n=1 Tax=Lasius niger TaxID=6776... [more]
A0A165BJT7_EXIGL1.660e-938.54Uncharacterized protein (Fragment) n=2 Tax=Exidia ... [more]
A0A1Y6LD98_ZYMTR2.070e-932.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A3Q0EVF0_VIGRR5.190e-940.22uncharacterized protein LOC111241419 n=1 Tax=Vigna... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..94
e-value: 1.1E-10
score: 41.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1695contigH-paniculata_contig1695:208..522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1695.3890.1mRNA_H-paniculata_contig1695.3890.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1695 195..522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1695.3890.1 ID=prot_H-paniculata_contig1695.3890.1|Name=mRNA_H-paniculata_contig1695.3890.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MNKAMYGLRQAGRMWSKRLVEVLVNNVGMTQSKFDPCVFRLEKNGVVDMI
LCVHVDDVIVAGKSVKCDFLFAALRAEFQTTRGELKWYLGCAFWRDIVRG
VVRIT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2