prot_H-paniculata_contig1694.3886.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1694.3886.1
Unique Nameprot_H-paniculata_contig1694.3886.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length263
Homology
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BLAST of mRNA_H-paniculata_contig1694.3886.1 vs. uniprot
Match: D7G1K8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1K8_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 2.570e-91
Identity = 153/319 (47.96%), Postives = 185/319 (57.99%), Query Frame = 0 
Query:    1 MRTEFAIALAMGL--ICGSQAGAPTYSCFDPPDEGQTNPLGEGFEDVVGADCCDALTDESDIIAGRLVYWDPVNCNHGPGLFAISEAALCRAHDTDGCRFCRETCEDFEGLCITCDEVAGSALTSAPTATPTPGMLDS----TPAPVMVT---EMPFGIFPDTPSPLPRQAVTEAPTTEPAMM-------------------------------------------------SPGDDEDNCMCLTGMSDVEREVMALRGKTMRCDTSCSDGSDLTWGVINCNYFALGQNCRACSESCAEDADGLWFDQFGIICKPCDAI 261
            MR++ A  +A GL  +C   A APTYSCFDPPDEGQTNPLGEG EDVV ++CC+AL DESD++A R V WDPVNCNHGPG   I+EA LCRAHDTDGCRFC ++C+ +EGLCITC+EV    L S  + TP+P    S    TPAP ++T   E PFGIFP TP+P+   A    PT                                                       +P  +  +C C+  +S+ E  V+  R K M CD +CSD SDL WGV+NCNYFALGQNCRACS+ C +  DG W DQ G  CKPC AI
Sbjct:    1 MRSDIATVIAFGLLSVCPVSA-APTYSCFDPPDEGQTNPLGEGMEDVVESECCEALIDESDMMADREVIWDPVNCNHGPGDEPIAEAYLCRAHDTDGCRFCHDSCDGYEGLCITCEEVLEDLLNSD-SPTPSPDFETSEFPATPAPAILTAATEAPFGIFPATPAPV---APVXXPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPTAEASDCECVNSLSEEEMAVLTRRSKNMVCDPTCSDQSDLVWGVMNCNYFALGQNCRACSDLCDDQGDGTWLDQDGFPCKPCSAI 314
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1694.3886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1K8_ECTSI2.570e-9147.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..262
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1694contigH-paniculata_contig1694:19213..23313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1694.3886.1mRNA_H-paniculata_contig1694.3886.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1694 19213..23313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1694.3886.1 ID=prot_H-paniculata_contig1694.3886.1|Name=mRNA_H-paniculata_contig1694.3886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MRTEFAIALAMGLICGSQAGAPTYSCFDPPDEGQTNPLGEGFEDVVGADC
CDALTDESDIIAGRLVYWDPVNCNHGPGLFAISEAALCRAHDTDGCRFCR
ETCEDFEGLCITCDEVAGSALTSAPTATPTPGMLDSTPAPVMVTEMPFGI
FPDTPSPLPRQAVTEAPTTEPAMMSPGDDEDNCMCLTGMSDVEREVMALR
GKTMRCDTSCSDGSDLTWGVINCNYFALGQNCRACSESCAEDADGLWFDQ
FGIICKPCDAIV*
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